Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F394 I0 R1
|
1342 |
215.0 |
7134094 |
96.2% |
6862998 |
147.9 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > CP009273/3841274‑3841567
|
CGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCCTA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAAccag > SRR19973066.3187907/1‑146 (MQ=60)
TCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCAACGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCAGA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAACCAGCA > SRR19973066.709846/1‑150 (MQ=60)
CAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCAT < SRR19973066.1972537/150‑1 (MQ=60)
CCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAAccagcaatca < SRR19973066.323431/150‑11 (MQ=60)
CCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAAccagcaatca < SRR19973066.2132892/150‑11 (MQ=60)
CCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAAccagcaatca > SRR19973066.3079281/1‑140 (MQ=60)
CCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAAccagcaatcat < SRR19973066.2406595/150‑12 (MQ=60)
CCGGCCCCTTCTTGTTGTTGAGCATTTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAAccagcaatcat < SRR19973066.2406490/150‑12 (MQ=60)
CCCTTCTTGTTGTTGAGCATTTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAAGGCCTGCGGGCGATCGCTTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCC < SRR19973066.88735/150‑1 (MQ=60)
CCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCC < SRR19973066.3551458/150‑1 (MQ=60)
CTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCG < SRR19973066.199861/150‑1 (MQ=60)
TGTTTTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACATAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACG < SRR19973066.1212628/150‑1 (MQ=60)
GTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAG < SRR19973066.150352/150‑1 (MQ=60)
AATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAAT > SRR19973066.2437103/1‑150 (MQ=60)
AATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAAT > SRR19973066.2260487/1‑150 (MQ=60)
AATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAAT > SRR19973066.2437344/1‑150 (MQ=60)
AATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAACCAGCACCCAGCAATCATCATCCCGGCACGCCAGCCGTAAT > SRR19973066.1557943/1‑150 (MQ=60)
AATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAAAGACTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAAT > SRR19973066.2437308/1‑150 (MQ=60)
TCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAG < SRR19973066.519901/150‑1 (MQ=60)
CCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGC < SRR19973066.1054663/150‑1 (MQ=60)
CAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCG > SRR19973066.3358946/1‑150 (MQ=60)
GTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCAT > SRR19973066.1664201/1‑150 (MQ=60)
CGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCT < SRR19973066.1649759/150‑1 (MQ=60)
GTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTG < SRR19973066.2158120/150‑1 (MQ=60)
CCATTCACCGACCGCCGGTAAACCTCACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA < SRR19973066.3211018/150‑1 (MQ=60)
CCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA > SRR19973066.2340192/1‑150 (MQ=60)
CCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA > SRR19973066.2340964/1‑150 (MQ=60)
CCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAACCAGCACCCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA > SRR19973066.2340986/1‑150 (MQ=60)
CATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGA > SRR19973066.326002/1‑150 (MQ=60)
GACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAA < SRR19973066.2631835/150‑1 (MQ=60)
GACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAA < SRR19973066.870226/150‑1 (MQ=60)
GACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAA < SRR19973066.2631899/150‑1 (MQ=60)
CCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATG < SRR19973066.1066690/150‑1 (MQ=60)
CCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATG < SRR19973066.145265/150‑1 (MQ=60)
CGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACTCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTG < SRR19973066.991798/150‑1 (MQ=60)
CGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCC < SRR19973066.1969910/150‑1 (MQ=60)
GTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCG > SRR19973066.728958/1‑150 (MQ=60)
ACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTT < SRR19973066.2983724/150‑1 (MQ=60)
ACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTT < SRR19973066.2984032/150‑1 (MQ=60)
TAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGA > SRR19973066.2808944/1‑150 (MQ=60)
TAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGA > SRR19973066.2808954/1‑150 (MQ=60)
GCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTT > SRR19973066.910304/1‑150 (MQ=60)
CCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTA < SRR19973066.2304840/150‑1 (MQ=60)
CCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTA > SRR19973066.2366463/1‑150 (MQ=60)
CCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTA < SRR19973066.975155/150‑1 (MQ=60)
CCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTA < SRR19973066.975799/150‑1 (MQ=60)
CTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTAT < SRR19973066.2040800/150‑1 (MQ=60)
CGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCG > SRR19973066.2275485/1‑150 (MQ=60)
CGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCG > SRR19973066.2274730/1‑150 (MQ=60)
CGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCG < SRR19973066.1347569/150‑1 (MQ=60)
GGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC < SRR19973066.3215902/150‑1 (MQ=60)
GGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC < SRR19973066.3215898/150‑1 (MQ=60)
GGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC < SRR19973066.3053193/150‑1 (MQ=60)
CGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGT > SRR19973066.3251384/1‑150 (MQ=60)
GATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTG < SRR19973066.328379/150‑1 (MQ=60)
GATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTG > SRR19973066.1366140/1‑150 (MQ=60)
CGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC < SRR19973066.3175419/150‑1 (MQ=60)
CGCGGAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC < SRR19973066.1393159/150‑1 (MQ=60)
GTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCAT > SRR19973066.2179440/1‑150 (MQ=60)
GTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCAT > SRR19973066.799506/1‑150 (MQ=60)
GTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCAT > SRR19973066.800608/1‑150 (MQ=60)
CGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGC < SRR19973066.2411228/150‑1 (MQ=60)
CCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCC < SRR19973066.3590101/150‑1 (MQ=60)
CCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCC < SRR19973066.2649351/150‑1 (MQ=60)
AGAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACC < SRR19973066.703236/150‑1 (MQ=60)
GAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCG < SRR19973066.2806491/150‑1 (MQ=60)
GAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCG < SRR19973066.1016355/150‑1 (MQ=60)
GAAAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCG < SRR19973066.1528705/150‑1 (MQ=60)
AAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCC > SRR19973066.670017/1‑150 (MQ=60)
AAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCC > SRR19973066.670996/1‑150 (MQ=60)
AAAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCC > SRR19973066.1980424/1‑150 (MQ=60)
AAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCG > SRR19973066.3222965/1‑150 (MQ=60)
AAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCG > SRR19973066.3235611/1‑150 (MQ=60)
AAATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCG > SRR19973066.1919252/1‑150 (MQ=60)
ATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCG > SRR19973066.2628975/1‑150 (MQ=60)
ATCCCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCG > SRR19973066.2628811/1‑150 (MQ=60)
CCCACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTC > SRR19973066.3047218/1‑150 (MQ=60)
CACGACTATCGCCATACAACCAGCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGG > SRR19973066.2922161/1‑150 (MQ=60)
atacaaccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCA < SRR19973066.1261731/140‑1 (MQ=60)
atacaaccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCA < SRR19973066.2909091/140‑1 (MQ=60)
acaaccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGG > SRR19973066.1035346/9‑150 (MQ=60)
acaaccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGG > SRR19973066.2583350/9‑150 (MQ=60)
G‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCCGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAA < SRR19973066.2781427/150‑1 (MQ=60)
caaccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGC > SRR19973066.1999863/8‑150 (MQ=60)
ccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGACTGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCACCCGCCGCGCTCGGTACGTGAATACCAGGCCGT > SRR19973066.3365173/5‑150 (MQ=60)
ccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGT > SRR19973066.3365163/5‑150 (MQ=60)
ccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGT < SRR19973066.817619/146‑1 (MQ=60)
ccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGT < SRR19973066.817280/146‑1 (MQ=60)
ccagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCACACCAACCGCCGCGCTCGGTACGTGAATACCATGCCGT > SRR19973066.3366060/5‑150 (MQ=60)
cagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT < SRR19973066.782871/147‑1 (MQ=60)
cagCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT < SRR19973066.341211/147‑1 (MQ=60)
agCAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA > SRR19973066.1044772/3‑150 (MQ=60)
CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAAC > SRR19973066.657106/1‑150 (MQ=60)
AA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACA < SRR19973066.526034/150‑1 (MQ=60)
AA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACA > SRR19973066.1453067/1‑150 (MQ=60)
CAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTCCGTGAATACCAGGCCGTTAACAGAC > SRR19973066.39195/1‑150 (MQ=60)
CAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGAC > SRR19973066.1597585/1‑150 (MQ=60)
CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCG > SRR19973066.2208644/1‑150 (MQ=60)
AATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > SRR19973066.2331268/1‑150 (MQ=60)
AATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > SRR19973066.2330722/1‑150 (MQ=60)
AATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > SRR19973066.525153/1‑150 (MQ=60)
AATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > SRR19973066.1093488/1‑150 (MQ=60)
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CGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAA‑‑‑‑‑‑‑CCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > CP009273/3841274‑3841567
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
