Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F434 I0 R1
|
1130 |
215.9 |
7031662 |
97.1% |
6827743 |
147.9 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > CP009273/3841271‑3841567
|
ACGCGTAAACCCTGCCCATTCTTGTTTTTTTGATATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACATAACGCCTGCTGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAC < SRR19973065.1620667/150‑1 (MQ=60)
CGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAACC < SRR19973065.2181557/150‑1 (MQ=60)
GTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagc > SRR19973065.88076/1‑145 (MQ=60)
GTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCAAA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccacc > SRR19973065.2460815/1‑145 (MQ=60)
GTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACCACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagc > SRR19973065.2461226/1‑145 (MQ=60)
CAACCCTGCCCCTTGTTGTTGTTGAGAATTTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagcaa < SRR19973065.637535/150‑8 (MQ=60)
ACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagcaatc < SRR19973065.414553/150‑10 (MQ=60)
CCTGCCCGTTATTGTTGTTGAGAAATTACCAGCGGGTGGTGTCGCCTTTCACCGACCGCGGTTAAACCTTACGCCTGCGGGCGATCGCGTAGCCGACAGAAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagcaatcat < SRR19973065.935969/150‑12 (MQ=60)
GCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagcaatcatcat < SRR19973065.2119181/150‑15 (MQ=60)
GCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagcaatcatcat < SRR19973065.2119160/150‑15 (MQ=60)
GCCCCTTCGTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAAccagcaatcatcat < SRR19973065.2119283/150‑15 (MQ=60)
CCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCC < SRR19973065.1948477/150‑1 (MQ=60)
CCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCC < SRR19973065.1307248/150‑1 (MQ=60)
CCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCC < SRR19973065.1942289/150‑1 (MQ=60)
CCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCC > SRR19973065.3048017/1‑150 (MQ=60)
TTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGG > SRR19973065.2948219/1‑150 (MQ=60)
GTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGC > SRR19973065.3375190/1‑150 (MQ=60)
CAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAA < SRR19973065.2258774/150‑1 (MQ=60)
GTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCG < SRR19973065.3409715/150‑1 (MQ=60)
CGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCT > SRR19973065.1848202/1‑150 (MQ=60)
GTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTG > SRR19973065.2582596/1‑150 (MQ=60)
GTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTG > SRR19973065.2580863/1‑150 (MQ=60)
GTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCC < SRR19973065.3528681/150‑1 (MQ=60)
GCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATC > SRR19973065.1727268/1‑150 (MQ=60)
GCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATC > SRR19973065.1727275/1‑150 (MQ=60)
CCATTCACCGACCGCCGTTAAACCTACCGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA < SRR19973065.1203462/150‑1 (MQ=60)
CCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA < SRR19973065.2099786/150‑1 (MQ=60)
CCATTCACCGACCCCCGGTAAACATAACGCCTGCGGGCGATCGGGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCA < SRR19973065.1570038/150‑1 (MQ=60)
CACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATG > SRR19973065.1052828/1‑150 (MQ=60)
CACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATG > SRR19973065.1052876/1‑150 (MQ=60)
CCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGG < SRR19973065.2169780/150‑1 (MQ=60)
CGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGA > SRR19973065.3364053/1‑150 (MQ=60)
ACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAAT < SRR19973065.3105899/150‑1 (MQ=60)
CGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTG < SRR19973065.3193572/150‑1 (MQ=60)
CGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTG < SRR19973065.1133657/150‑1 (MQ=60)
GTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCG > SRR19973065.109425/1‑150 (MQ=60)
AACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCG > SRR19973065.3374102/1‑150 (MQ=60)
AACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCG > SRR19973065.3375065/1‑150 (MQ=60)
AACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCG > SRR19973065.1052645/1‑150 (MQ=60)
AACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCG > SRR19973065.1135995/1‑150 (MQ=60)
CCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCC > SRR19973065.525502/1‑150 (MQ=60)
CCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCC > SRR19973065.525495/1‑150 (MQ=60)
CCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCC > SRR19973065.2517730/1‑150 (MQ=60)
CCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTA < SRR19973065.312788/150‑1 (MQ=60)
CTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCTCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTAT > SRR19973065.2245589/1‑150 (MQ=60)
TGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATG > SRR19973065.2298594/1‑150 (MQ=60)
TCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTT < SRR19973065.331098/150‑1 (MQ=60)
TCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTT < SRR19973065.331037/150‑1 (MQ=60)
CGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC > SRR19973065.638792/1‑150 (MQ=60)
CGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC > SRR19973065.638678/1‑150 (MQ=60)
CGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTC > SRR19973065.2636949/1‑150 (MQ=60)
CGTAGCCGCCAGCAGAGAAAAATCCACACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCA > SRR19973065.1258250/1‑150 (MQ=60)
TAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATA > SRR19973065.1633468/1‑150 (MQ=60)
AGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAA > SRR19973065.1486182/1‑150 (MQ=60)
AGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAA > SRR19973065.1485853/1‑150 (MQ=60)
GCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAAT < SRR19973065.59220/150‑1 (MQ=60)
GCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAAT < SRR19973065.2930405/150‑1 (MQ=60)
GCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGCCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAAT < SRR19973065.1984695/150‑1 (MQ=60)
CAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CAACCAGCGACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGNAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCA > SRR19973065.1793144/1‑150 (MQ=60)
AGAGAAAAATCCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAA > SRR19973065.2590330/1‑150 (MQ=60)
CCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCT < SRR19973065.3386392/150‑1 (MQ=60)
CCCCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCT < SRR19973065.3386402/150‑1 (MQ=60)
CCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCG > SRR19973065.1336309/1‑150 (MQ=60)
CCACGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCG > SRR19973065.1335665/1‑150 (MQ=60)
CGACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTA > SRR19973065.1243610/1‑150 (MQ=60)
GACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTAC > SRR19973065.95123/1‑150 (MQ=60)
GACTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTAC > SRR19973065.780273/1‑150 (MQ=60)
CTATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGT > SRR19973065.1060097/1‑150 (MQ=60)
TATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTG < SRR19973065.172768/150‑1 (MQ=60)
TATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTG > SRR19973065.2954116/1‑150 (MQ=60)
ATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGA < SRR19973065.1716765/150‑1 (MQ=60)
ATCGCCATACAACCAGCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGA > SRR19973065.2241975/1‑150 (MQ=60)
tcgccatacaaccagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAA > SRR19973065.3273058/16‑150 (MQ=60)
catacaaccagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACC > SRR19973065.2066058/12‑150 (MQ=60)
catacaaccagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACC > SRR19973065.424052/12‑150 (MQ=60)
aaccagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCC > SRR19973065.1803803/7‑150 (MQ=60)
aaccagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCC > SRR19973065.2492747/7‑150 (MQ=60)
aaccagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCC > SRR19973065.722632/7‑150 (MQ=60)
cagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT < SRR19973065.231542/147‑1 (MQ=60)
cagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT < SRR19973065.3058712/147‑1 (MQ=60)
cagCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT < SRR19973065.3058915/147‑1 (MQ=60)
agCA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA < SRR19973065.504553/148‑1 (MQ=60)
A‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACA > SRR19973065.805377/1‑150 (MQ=60)
CAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGAC > SRR19973065.2296690/1‑150 (MQ=60)
CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCG > SRR19973065.2638720/1‑150 (MQ=60)
CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCG > SRR19973065.2967634/1‑150 (MQ=60)
CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCG < SRR19973065.1120573/150‑1 (MQ=60)
CAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCG > SRR19973065.2967812/1‑150 (MQ=60)
AATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > SRR19973065.2218970/1‑150 (MQ=60)
AATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > SRR19973065.1052747/1‑150 (MQ=60)
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ACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATA‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑ACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTAACAGACGCGC > CP009273/3841271‑3841567
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
