Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F368 I0 R1	1472	214.4	7116750	95.9%	6824963	147.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	1,348,772	G→T	100%	P2T (CCT→ACT) A319D (GCC→GAC)	sapC ← sapB ←	antimicrobial peptide transport ABC transporter permease antimicrobial peptide transport ABC transporter permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,348,772	0	G	T	96.7%	551.9 / 9.4	183	P2T (CCT→ACT) A319D (GCC→GAC)	sapC sapB	antimicrobial peptide transport ABC transporter permease antimicrobial peptide transport ABC transporter permease
Reads supporting (aligned to +/- strand): ref base G (2/4); new base T (66/111); total (68/115)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01
Rejected as polymorphism: Frequency below/above cutoff threshold.

Only 100 of 183 total aligned reads displayed.

GCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACC  >  CP009273/1348627‑1348916

gcAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCa                                                                                                                                                <  1:2388821/148‑1 (MQ=255)

 cAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCAt                                                                                                                                               <  1:3209675/148‑1 (MQ=255)

     ccAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCa                                                                                                                                           >  2:2649723/1‑148 (MQ=255)

        gccgccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTc                                                                                                                                        <  1:1087000/148‑1 (MQ=255)

        gccgccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTc                                                                                                                                        <  2:2270545/148‑1 (MQ=255)

        gccgccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTc                                                                                                                                        <  2:2173719/148‑1 (MQ=255)

           gccAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCtt                                                                                                                                     <  1:1049704/148‑1 (MQ=255)

              aaaaaTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATg                                                                                                                                  <  1:2910865/148‑1 (MQ=255)

               aaaaTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGt                                                                                                                                 <  2:1672980/148‑1 (MQ=255)

               aaaaTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGt                                                                                                                                 <  1:1624777/148‑1 (MQ=255)

                  aTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTc                                                                                                                              <  1:1220451/148‑1 (MQ=255)

                  aTACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTc                                                                                                                              <  2:2152833/148‑1 (MQ=255)

                   tACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCa                                                                                                                             <  2:3446548/148‑1 (MQ=255)

                     cacaGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTGTTCGCTGTATACGCTATCGTACGTCATACCATTCCGTATGTTTCaga                                                                                                                           >  2:2511496/1‑148 (MQ=255)

                      acaGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCagag                                                                                                                          <  2:1675418/148‑1 (MQ=255)

                      acaGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCagag                                                                                                                          <  1:1207855/148‑1 (MQ=255)

                         gTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGt                                                                                                                       >  2:2168305/1‑148 (MQ=255)

                          tACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGtt                                                                                                                      <  1:1026636/148‑1 (MQ=255)

                             agccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGc                                                                                                                   <  2:1743925/148‑1 (MQ=255)

                              gccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGcc                                                                                                                  <  1:2234253/148‑1 (MQ=255)

                               ccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAATTCATACCCTTGCTTATGTTTCAGAGGGTTATCCa                                                                                                                 >  1:459463/1‑148 (MQ=255)

                               ccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCa                                                                                                                 >  2:2655798/1‑148 (MQ=255)

                               ccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCa                                                                                                                 <  2:139630/148‑1 (MQ=255)

                               ccagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCa                                                                                                                 <  1:646855/148‑1 (MQ=255)

                                cagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCAt                                                                                                                >  2:3167006/1‑148 (MQ=255)

                                cagccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCAt                                                                                                                <  1:3056560/148‑1 (MQ=255)

                                 agccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATg                                                                                                               >  2:3103040/1‑148 (MQ=255)

                                  gccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg                                                                                                              >  1:2962358/1‑148 (MQ=255)

                                  gccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg                                                                                                              <  2:438824/148‑1 (MQ=255)

                                  gccCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg                                                                                                              >  1:895652/1‑148 (MQ=255)

                                   ccccGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGc                                                                                                             >  2:3485460/1‑148 (MQ=255)

                                      cgcgCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc                                                                                                          >  2:1009796/1‑148 (MQ=255)

                                      cgcgCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc                                                                                                          <  1:1009796/148‑1 (MQ=255)

                                      cgcgCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc                                                                                                          <  1:1008981/148‑1 (MQ=255)

                                          cAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaa                                                                                                      <  1:20109/148‑1 (MQ=255)

                                          cAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaa                                                                                                      <  1:1842447/148‑1 (MQ=255)

                                            gCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAat                                                                                                    <  2:705888/148‑1 (MQ=255)

                                            gCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAat                                                                                                    <  1:1296236/148‑1 (MQ=255)

                                             ccGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAata                                                                                                   <  1:1528145/148‑1 (MQ=255)

                                               gTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATc                                                                                                 <  2:1895357/148‑1 (MQ=255)

                                                tACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCa                                                                                                >  2:671425/1‑148 (MQ=255)

                                                tACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCa                                                                                                <  1:358345/148‑1 (MQ=255)

                                                 aCAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAg                                                                                               <  2:850846/148‑1 (MQ=255)

                                                   aGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGaa                                                                                             <  1:2449275/148‑1 (MQ=255)

                                                   aGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGaa                                                                                             <  2:2173980/148‑1 (MQ=255)

                                                   aGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGaa                                                                                             <  1:2850588/148‑1 (MQ=255)

                                                    ggCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGaaa                                                                                            <  1:817919/148‑1 (MQ=255)

                                                     gCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt                                                                                           >  2:2217059/1‑148 (MQ=255)

                                                      ccGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATc                                                                                          <  2:135539/148‑1 (MQ=255)

                                                       cGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCa                                                                                         <  2:2352765/148‑1 (MQ=255)

                                                       cGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCa                                                                                         <  2:2352742/148‑1 (MQ=255)

                                                         aCCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACg                                                                                       <  1:1362491/148‑1 (MQ=255)

                                                         aCCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACg                                                                                       <  2:336695/148‑1 (MQ=255)

                                                            aTCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTa                                                                                    <  2:3245114/148‑1 (MQ=255)

                                                               gCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACa                                                                                 <  2:3313015/148‑1 (MQ=255)

                                                                   agGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACaataa                                                                             <  1:2542906/148‑1 (MQ=255)

                                                                     gCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATg                                                                           >  1:783440/1‑148 (MQ=255)

                                                                        tCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGAcc                                                                        >  1:3540181/1‑148 (MQ=255)

                                                                          aCTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAg                                                                      <  2:1221389/148‑1 (MQ=255)

                                                                             ataAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGa                                                                   <  1:1096721/148‑1 (MQ=255)

                                                                               aaaaTTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGc                                                                 <  2:2561114/148‑1 (MQ=255)

                                                                                    ttGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGATCAGTGAGCcacac                                                            >  2:759183/1‑148 (MQ=255)

                                                                                    ttGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCcacac                                                            >  2:2066909/1‑148 (MQ=255)

                                                                                           aGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCa                                                     >  2:1386397/1‑148 (MQ=255)

                                                                                           aGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCAACa                                                     >  1:2890736/1‑148 (MQ=255)

                                                                                            ggCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCAc                                                    <  1:1541460/148‑1 (MQ=255)

                                                                                             gCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACt                                                   >  1:271224/1‑148 (MQ=255)

                                                                                             gCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACt                                                   >  2:123686/1‑148 (MQ=255)

                                                                                              cGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTc                                                  <  1:2655798/148‑1 (MQ=255)

                                                                                              cGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTc                                                  <  2:1797241/148‑1 (MQ=255)

                                                                                              cGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTc                                                  <  1:1316250/148‑1 (MQ=255)

                                                                                              cGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTc                                                  <  2:2588662/148‑1 (MQ=255)

                                                                                                 tACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCcgg                                               <  2:469647/148‑1 (MQ=255)

                                                                                                   cGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCGTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCcggcg                                             >  1:2211808/1‑148 (MQ=255)

                                                                                                      aGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGaa                                          <  1:1797017/148‑1 (MQ=255)

                                                                                                           gCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGc                                     <  2:3411471/148‑1 (MQ=255)

                                                                                                           gCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGc                                     <  2:3410995/148‑1 (MQ=255)

                                                                                                             ccGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTg                                   <  2:2699594/148‑1 (MQ=255)

                                                                                                                 cgggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTa                               <  2:577770/148‑1 (MQ=255)

                                                                                                                 cgggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTa                               <  2:577790/148‑1 (MQ=255)

                                                                                                                 cgggcgCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTa                               <  2:3037464/148‑1 (MQ=255)

                                                                                                                    gcgcTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGATCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATc                            <  1:759183/148‑1 (MQ=255)

                                                                                                                       cTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctg                         >  1:972244/1‑148 (MQ=255)

                                                                                                                        ttttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgc                        <  1:2954405/148‑1 (MQ=255)

                                                                                                                        ttttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgc                        <  1:2954613/148‑1 (MQ=255)

                                                                                                                         tttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgct                       >  2:2866443/1‑148 (MQ=255)

                                                                                                                         tttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgct                       >  1:223758/1‑148 (MQ=255)

                                                                                                                         tttCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCctgct                       <  1:3543289/148‑1 (MQ=255)

                                                                                                                            cGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGc                    <  2:3082398/148‑1 (MQ=255)

                                                                                                                             gCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCg                   >  1:1659888/1‑148 (MQ=255)

                                                                                                                              cTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCgg                  <  2:2924407/148‑1 (MQ=255)

                                                                                                                                gTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGAt                >  1:3082569/1‑148 (MQ=255)

                                                                                                                                  ataCGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATgg              <  1:2323840/148‑1 (MQ=255)

                                                                                                                                  ataCGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATgg              <  2:2264906/148‑1 (MQ=255)

                                                                                                                                    aCGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCg            >  1:2402179/1‑148 (MQ=255)

                                                                                                                                     cGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGt           <  1:3496861/148‑1 (MQ=255)

                                                                                                                                        tATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGttaa        >  2:2572528/1‑148 (MQ=255)

                                                                                                                                          tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGttaatt      >  1:33735/1‑148 (MQ=255)

                                                                                                                                           cGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGttaatta     <  1:3103040/148‑1 (MQ=255)

                                                                                                                                              aaGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAAcc  <  1:2084965/148‑1 (MQ=255)

GCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACC  >  CP009273/1348627‑1348916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGCGCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAGCGC  >  CP009273/1348624‑1348921

GGCGCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTC                                                                                                                                                      <  SRR19973067.1542302/150‑1 (MQ=60)

  CGCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCAT                                                                                                                                                    <  SRR19973067.531851/150‑1 (MQ=60)

   GCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATA                                                                                                                                                   <  SRR19973067.2404344/150‑1 (MQ=60)

   GCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATA                                                                                                                                                   <  SRR19973067.3112859/150‑1 (MQ=60)

    CAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATAC                                                                                                                                                  <  SRR19973067.3229900/150‑1 (MQ=60)

    CAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATAC                                                                                                                                                  <  SRR19973067.3229915/150‑1 (MQ=60)

     AAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACC                                                                                                                                                 <  SRR19973067.2246973/150‑1 (MQ=60)

       ACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCAT                                                                                                                                               >  SRR19973067.726803/1‑150 (MQ=60)

        CCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATT                                                                                                                                              <  SRR19973067.2482229/150‑1 (MQ=60)

           GCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCT                                                                                                                                           <  SRR19973067.1094432/150‑1 (MQ=60)

             CGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTA                                                                                                                                         >  SRR19973067.3138035/1‑150 (MQ=60)

              GCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTAT                                                                                                                                        <  SRR19973067.1056907/150‑1 (MQ=60)

              GCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTAT                                                                                                                                        <  SRR19973067.1056830/150‑1 (MQ=60)

              GCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTAT                                                                                                                                        <  SRR19973067.1056914/150‑1 (MQ=60)

                 AAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTT                                                                                                                                     >  SRR19973067.2574985/1‑150 (MQ=60)

                 AAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTT                                                                                                                                     <  SRR19973067.2929395/150‑1 (MQ=60)

                 AAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTT                                                                                                                                     <  SRR19973067.2929629/150‑1 (MQ=60)

                 AAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTT                                                                                                                                     <  SRR19973067.2929410/150‑1 (MQ=60)

                  AAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTNT                                                                                                                                    <  SRR19973067.1635924/150‑1 (MQ=60)

                    AATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCA                                                                                                                                  <  SRR19973067.127402/150‑1 (MQ=60)

                     ATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAG                                                                                                                                 <  SRR19973067.1228567/150‑1 (MQ=60)

                      TACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGA                                                                                                                                >  SRR19973067.2463037/1‑150 (MQ=60)

                         ACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGG                                                                                                                             <  SRR19973067.1215786/150‑1 (MQ=60)

                             TACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAG                                                                                                                         <  SRR19973067.1033696/150‑1 (MQ=60)

                                AGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAATTCATACCCTTGCTTATGTTTCAGAGGGTTATCCA                                                                                                                      >  SRR19973067.462646/1‑150 (MQ=60)

                                 GCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCAT                                                                                                                     <  SRR19973067.2249119/150‑1 (MQ=60)

                                  CCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATG                                                                                                                    <  SRR19973067.2995234/150‑1 (MQ=60)

                                  CCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATG                                                                                                                    <  SRR19973067.651241/150‑1 (MQ=60)

                                   CAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGG                                                                                                                   >  SRR19973067.2981067/1‑150 (MQ=60)

                                   CAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGG                                                                                                                   >  SRR19973067.2981070/1‑150 (MQ=60)

                                   CAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGG                                                                                                                   <  SRR19973067.3076025/150‑1 (MQ=60)

                                   CAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGG                                                                                                                   >  SRR19973067.901566/1‑150 (MQ=60)

                                   CAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGG                                                                                                                   <  SRR19973067.2346164/150‑1 (MQ=60)

                                       CCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCCCTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAACTCATACCATTCCATATTTTTAAGAGGGTTAGCCATGGCACC                                                                                                               >  SRR19973067.719216/1‑150 (MQ=60)

                                       CCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACC                                                                                                               >  SRR19973067.1809324/1‑150 (MQ=60)

                                         CGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCA                                                                                                             <  SRR19973067.1016733/150‑1 (MQ=60)

                                         CGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCA                                                                                                             <  SRR19973067.1015916/150‑1 (MQ=60)

                                             CAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAAT                                                                                                         <  SRR19973067.20410/150‑1 (MQ=60)

                                             CAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAAT                                                                                                         <  SRR19973067.1855015/150‑1 (MQ=60)

                                             CAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAAT                                                                                                         <  SRR19973067.20409/150‑1 (MQ=60)

                                               GCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATAT                                                                                                       <  SRR19973067.1305086/150‑1 (MQ=60)

                                                CCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATC                                                                                                      <  SRR19973067.1538440/150‑1 (MQ=60)

                                                   TACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGA                                                                                                   <  SRR19973067.2126772/150‑1 (MQ=60)

                                                   TACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGA                                                                                                   <  SRR19973067.360832/150‑1 (MQ=60)

                                                   TACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGA                                                                                                   <  SRR19973067.360834/150‑1 (MQ=60)

                                                      AGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAANT                                                                                                <  SRR19973067.2868849/150‑1 (MQ=60)

                                                      AGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAT                                                                                                <  SRR19973067.2465366/150‑1 (MQ=60)

                                                      AGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAT                                                                                                <  SRR19973067.2868876/150‑1 (MQ=60)

                                                       GGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATC                                                                                               <  SRR19973067.823519/150‑1 (MQ=60)

                                                            ACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTT                                                                                          <  SRR19973067.1371799/150‑1 (MQ=60)

                                                            ACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCAATCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATAAGAAATAACGTT                                                                                          >  SRR19973067.2278676/1‑150 (MQ=60)

                                                             CCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATAAGCTATCGTAATTCATACCAATACATATTTTTCAGAGGGTTAGCCATGGCACCCAAAAAATAAGAAATCACGTTA                                                                                         >  SRR19973067.1220100/1‑150 (MQ=60)

                                                                      AGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATG                                                                                <  SRR19973067.764948/150‑1 (MQ=60)

                                                                      AGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATG                                                                                >  SRR19973067.788857/1‑150 (MQ=60)

                                                                      AGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATG                                                                                <  SRR19973067.2559552/150‑1 (MQ=60)

                                                                         CGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACC                                                                             >  SRR19973067.3562535/1‑150 (MQ=60)

                                                                         CGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACC                                                                             >  SRR19973067.3562524/1‑150 (MQ=60)

                                                                                ATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGC                                                                      <  SRR19973067.1101736/150‑1 (MQ=60)

                                                                                ATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGC                                                                      <  SRR19973067.1104193/150‑1 (MQ=60)

                                                                                          CGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCAT                                                            <  SRR19973067.1029707/150‑1 (MQ=60)

                                                                                            CCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTGGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCAACA                                                          >  SRR19973067.143809/1‑150 (MQ=60)

                                                                                            CCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCAACA                                                          >  SRR19973067.2909208/1‑150 (MQ=60)

                                                                                             CAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCAC                                                         <  SRR19973067.1645863/150‑1 (MQ=60)

                                                                                              AGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACT                                                        >  SRR19973067.273039/1‑150 (MQ=60)

                                                                                              AGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATAACATTCCGTATGTTTCAGAGGGTTAGCCATGGCACCCCAAATATGAGAAATCACGTTAAAAATAATGACCAGTGAGCCACACACCCTCACT                                                        >  SRR19973067.2703381/1‑150 (MQ=60)

                                                                                              AGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCGATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCAACACT                                                        >  SRR19973067.846503/1‑150 (MQ=60)

                                                                                               GGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTC                                                       <  SRR19973067.1551912/150‑1 (MQ=60)

                                                                                                 CGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCG                                                     <  SRR19973067.2672901/150‑1 (MQ=60)

                                                                                                 CGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCG                                                     <  SRR19973067.1325237/150‑1 (MQ=60)

                                                                                                    TACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCGTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAAAAATAATGACCAGTGAGCCACACACCAACACTCCGGCG                                                  >  SRR19973067.2226545/1‑150 (MQ=60)

                                                                                                         AGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAAT                                             <  SRR19973067.1809098/150‑1 (MQ=60)

                                                                                                                 CGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGT                                     >  SRR19973067.3566217/1‑150 (MQ=60)

                                                                                                                       GCGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGATCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCT                               <  SRR19973067.764457/150‑1 (MQ=60)

                                                                                                                        CGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTG                              >  SRR19973067.978909/1‑150 (MQ=60)

                                                                                                                        CGCTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTG                              >  SRR19973067.978908/1‑150 (MQ=60)

                                                                                                                          CTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCT                            >  SRR19973067.225383/1‑150 (MQ=60)

                                                                                                                          CTTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCT                            >  SRR19973067.225384/1‑150 (MQ=60)

                                                                                                                           TTTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTG                           >  SRR19973067.1610338/1‑150 (MQ=60)

                                                                                                                           TTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTG                           <  SRR19973067.2973278/150‑1 (MQ=60)

                                                                                                                           TTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTG                           <  SRR19973067.2973089/150‑1 (MQ=60)

                                                                                                                           TTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTG                           <  SRR19973067.2973300/150‑1 (MQ=60)

                                                                                                                            TTTCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGG                          <  SRR19973067.3565653/150‑1 (MQ=60)

                                                                                                                              TCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCG                        >  SRR19973067.1671337/1‑150 (MQ=60)

                                                                                                                              TCGCTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCG                        >  SRR19973067.1671360/1‑150 (MQ=60)

                                                                                                                                 CTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGAT                     >  SRR19973067.1319360/1‑150 (MQ=60)

                                                                                                                                 CTGTATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGAT                     >  SRR19973067.3102183/1‑150 (MQ=60)

                                                                                                                                     ATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCG                 <  SRR19973067.2339109/150‑1 (MQ=60)

                                                                                                                                     ATACGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCG                 >  SRR19973067.2417857/1‑150 (MQ=60)

                                                                                                                                        CGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTA              <  SRR19973067.3519044/150‑1 (MQ=60)

                                                                                                                                        CGCTATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTA              <  SRR19973067.3519033/150‑1 (MQ=60)

                                                                                                                                           TATCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATT           >  SRR19973067.1348548/1‑150 (MQ=60)

                                                                                                                                           TATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATT           >  SRR19973067.34230/1‑150 (MQ=60)

                                                                                                                                             TCGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAA         >  SRR19973067.536023/1‑150 (MQ=60)

                                                                                                                                              CGTAAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAAC        <  SRR19973067.3122781/150‑1 (MQ=60)

                                                                                                                                                 AAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAG     >  SRR19973067.2158195/1‑150 (MQ=60)

                                                                                                                                                 AAGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAG     <  SRR19973067.2098769/150‑1 (MQ=60)

                                                                                                                                                  AGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAGC    >  SRR19973067.1112657/1‑150 (MQ=60)

                                                                                                                                                  AGTCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAGC    >  SRR19973067.2678665/1‑150 (MQ=60)

                                                                                                                                                    TCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAGCGC  <  SRR19973067.3176339/150‑1 (MQ=60)

                                                                                                                                                    TCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAGCGC  <  SRR19973067.1395830/150‑1 (MQ=60)

GGCGCAAACCAGCCGCCAAAAATACACAGTACAGCCAGCCCCGCGCAGCCGTACAGGCCGACCATCGCAGAGGCGTCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCACACACCATCACTCCGGCGGAAATGGCTGCGTAATCCTGCTGGCGGATGGCGTTAATTAACCAGCGC  >  CP009273/1348624‑1348921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`