Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F534 I1 R1
|
1235 |
230.2 |
7611948 |
95.1% |
7238962 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP009273 |
1,207,417 |
C→A |
G15C (GGT→TGT) |
iraM ← |
RpoS stabilzer during Mg starvation, anti‑RssB factor |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 1,207,417 | 0 | C | A | 100.0%
| 675.4
/ NA
| 203 | G15C (GGT→TGT) | iraM | RpoS stabilzer during Mg starvation, anti‑RssB factor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (103/100); total (103/100) |
Only 100 of 206 total aligned reads displayed.
TGTGATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATT > CP009273/1207270‑1207563
|
tgtgATAAATATTAATAGGATATTATTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACaac < 1:3073907/150‑1 (MQ=255)
gtgATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATacaaca > 1:1206609/1‑150 (MQ=255)
gATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATg < 2:2351857/150‑1 (MQ=255)
aTAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGt > 2:545580/1‑150 (MQ=255)
aTAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGt > 1:3124886/1‑150 (MQ=255)
tAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGtt > 1:3514657/1‑150 (MQ=255)
tAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGtt < 2:2044515/150‑1 (MQ=255)
tAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGtt < 1:3289911/150‑1 (MQ=255)
gTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGa < 1:2161006/150‑1 (MQ=255)
tAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGaa < 2:1577514/150‑1 (MQ=255)
tAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGAAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGaa > 2:1118635/1‑150 (MQ=255)
aaTAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAAt > 2:663386/1‑150 (MQ=255)
aGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTAc < 2:3132129/150‑1 (MQ=255)
gATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCg > 2:2595363/1‑150 (MQ=255)
tatTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCgtg > 2:2141761/1‑150 (MQ=255)
tatTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCgtg > 1:1879142/1‑150 (MQ=255)
atTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCgtgt > 2:2471457/1‑150 (MQ=255)
tCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCa < 1:1049165/150‑1 (MQ=255)
cTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCaa > 2:375375/1‑150 (MQ=255)
ttATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAAtt < 2:783298/150‑1 (MQ=255)
tATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTa < 2:585465/150‑1 (MQ=255)
aTCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTAc < 1:417426/150‑1 (MQ=255)
ttAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATc < 1:3084126/150‑1 (MQ=255)
aGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCAc > 2:3040840/1‑150 (MQ=255)
aataCCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCAt > 2:1380423/1‑150 (MQ=255)
aCCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTg > 1:718281/1‑150 (MQ=255)
aCCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTg < 1:1043087/150‑1 (MQ=255)
aGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTa > 2:1007519/1‑150 (MQ=255)
gACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTAt < 2:1250503/150‑1 (MQ=255)
aCTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATg < 1:3718637/150‑1 (MQ=255)
tAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATCGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCt < 1:2318492/150‑1 (MQ=255)
aaCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCtt > 1:2655139/1‑150 (MQ=255)
aaCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCtt > 2:1810028/1‑150 (MQ=255)
aaCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCtt > 1:3770845/1‑150 (MQ=255)
aCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTa < 2:1434536/150‑1 (MQ=255)
aCCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTa < 2:1176704/150‑1 (MQ=255)
ccGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTAt > 2:2392578/1‑150 (MQ=255)
gtAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCAc > 1:487552/1‑150 (MQ=255)
tataCTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTAt > 1:654696/1‑150 (MQ=255)
aCTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTa > 2:1391741/1‑150 (MQ=255)
aCTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTa > 2:2197771/1‑150 (MQ=255)
cTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTaa < 2:1501894/150‑1 (MQ=255)
cAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATg < 2:2655139/150‑1 (MQ=255)
cAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATg > 2:2205280/1‑150 (MQ=255)
aggaggGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATgg < 2:1805669/150‑1 (MQ=255)
aggaggGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATAAGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATgg < 2:3611479/150‑1 (MQ=255)
ggagggagAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGt > 1:362333/1‑150 (MQ=255)
ggagggagAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGt < 1:1537718/150‑1 (MQ=255)
gagggagAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGtt < 1:2254456/150‑1 (MQ=255)
gggagAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCa > 1:3457668/1‑150 (MQ=255)
ggagAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAt > 1:1732359/1‑150 (MQ=255)
gagaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAtt < 2:207038/150‑1 (MQ=255)
gagaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAtt < 2:1208184/150‑1 (MQ=255)
agaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTa < 1:1580134/150‑1 (MQ=255)
agaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTa > 2:3563654/1‑150 (MQ=255)
gaAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAg > 2:1106057/1‑150 (MQ=255)
aaaTATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAgg < 2:336726/150‑1 (MQ=255)
aaTATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGa > 2:866340/1‑150 (MQ=255)
atatAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGAt < 2:1879142/150‑1 (MQ=255)
atatAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGAt > 1:3325973/1‑150 (MQ=255)
atatAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGAt < 2:1148039/150‑1 (MQ=255)
tataGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATg < 2:1623485/150‑1 (MQ=255)
agtagATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGttt > 1:3684968/1‑150 (MQ=255)
agATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTAtt > 2:2271174/1‑150 (MQ=255)
aTTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTc < 1:1947331/150‑1 (MQ=255)
ttGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCt > 1:1907881/1‑150 (MQ=255)
tGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCtt < 2:132236/150‑1 (MQ=255)
gATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTg < 2:2408420/150‑1 (MQ=255)
aTACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGa < 1:1780951/150‑1 (MQ=255)
aTACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGa > 1:502170/1‑150 (MQ=255)
tACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGAt < 2:3392630/150‑1 (MQ=255)
aCCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTAAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGAtt > 1:1677297/1‑150 (MQ=255)
ccAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGAttt < 2:1567731/150‑1 (MQ=255)
tgatCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCat < 1:1380423/150‑1 (MQ=255)
gatCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCata > 2:1920243/1‑150 (MQ=255)
atCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCatat > 1:1232088/1‑150 (MQ=255)
cATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGa < 1:2553147/150‑1 (MQ=255)
ttttCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGt < 1:545580/150‑1 (MQ=255)
tCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGtata < 2:1206609/150‑1 (MQ=255)
cATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTatat > 2:1737151/1‑150 (MQ=255)
tatTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTa < 2:3262403/150‑1 (MQ=255)
tACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccc > 1:2872763/1‑150 (MQ=255)
cccATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAcccccc > 1:2460249/1‑150 (MQ=255)
cccATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAcccccc > 2:1196847/1‑150 (MQ=255)
tatGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTc > 1:2491030/1‑150 (MQ=255)
ggCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCaaa > 2:1224120/1‑150 (MQ=255)
cagtaaaaGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCaaaaa < 2:837420/146‑1 (MQ=255)
aaaaaGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGATTATATTACACCCCCCTCaaaaaaaa > 1:852800/1‑149 (MQ=255)
aaaaaGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAaaat > 2:3440306/1‑150 (MQ=255)
aaaaaGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAaaat > 1:1295689/1‑150 (MQ=255)
aaaaGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAaaata > 2:3768530/1‑150 (MQ=255)
aaGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAaaataaa > 1:315751/1‑150 (MQ=255)
aGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAACCCCCCCTCAAAAaaataaat > 1:1075554/1‑150 (MQ=255)
tataCAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaattaa > 1:2613234/1‑150 (MQ=255)
ataCAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaattaat < 1:3361390/150‑1 (MQ=255)
ataCAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaattaat < 1:497994/150‑1 (MQ=255)
taCAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaattaatt > 1:200466/1‑150 (MQ=255)
taCAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaattaatt > 1:2111173/1‑150 (MQ=255)
taCAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAaattaatt > 1:1163158/1‑150 (MQ=255)
taCAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAACCCCCCCTCAAAAAAATAaattaatt > 1:2110672/1‑150 (MQ=255)
|
TGTGATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATT > CP009273/1207270‑1207563
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGTGATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAA > CP009273/1207268‑1207566
|
GATGTGATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACA > SRR19973061.1430324/1‑150 (MQ=60)
TGTGATAAATATTAATAGGATATTATTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAAC < SRR19973061.3081840/150‑1 (MQ=60)
TGTGATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAAC > SRR19973061.331532/1‑150 (MQ=60)
GTGATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACA > SRR19973061.1209637/1‑150 (MQ=60)
GATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATG > SRR19973061.3270800/1‑150 (MQ=60)
AAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAG > SRR19973061.2127692/1‑150 (MQ=60)
ATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGT > SRR19973061.2360178/1‑150 (MQ=60)
ATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGT > SRR19973061.3132939/1‑150 (MQ=60)
TAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTT > SRR19973061.3523661/1‑150 (MQ=60)
TAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTT < SRR19973061.3298382/150‑1 (MQ=60)
GTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGA < SRR19973061.2166433/150‑1 (MQ=60)
AATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAAT > SRR19973061.3484989/1‑150 (MQ=60)
ATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAAATATACAACATGTAGGTTTAATT > SRR19973061.1344711/1‑150 (MQ=60)
AGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTAC < SRR19973061.848276/150‑1 (MQ=60)
GATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCG > SRR19973061.3560668/1‑150 (MQ=60)
TATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTG > SRR19973061.1883815/1‑150 (MQ=60)
TATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTG > SRR19973061.1882793/1‑150 (MQ=60)
TCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCA < SRR19973061.1051855/150‑1 (MQ=60)
ATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTAC < SRR19973061.418561/150‑1 (MQ=60)
CCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTA > SRR19973061.503197/1‑150 (MQ=60)
CTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTAT > SRR19973061.3707898/1‑150 (MQ=60)
TTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATC < SRR19973061.3092075/150‑1 (MQ=60)
AGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCAC < SRR19973061.691176/150‑1 (MQ=60)
ATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATT < SRR19973061.2492782/150‑1 (MQ=60)
TACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTT > SRR19973061.2725465/1‑150 (MQ=60)
ACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTG < SRR19973061.2952038/150‑1 (MQ=60)
ACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTG < SRR19973061.1045755/150‑1 (MQ=60)
ACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTG > SRR19973061.720150/1‑150 (MQ=60)
ACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTG < SRR19973061.1045759/150‑1 (MQ=60)
CCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGT < SRR19973061.2644242/150‑1 (MQ=60)
CCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGT < SRR19973061.2062880/150‑1 (MQ=60)
ACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATG < SRR19973061.3728139/150‑1 (MQ=60)
TAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATCGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCT < SRR19973061.2324376/150‑1 (MQ=60)
AACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTT > SRR19973061.3780474/1‑150 (MQ=60)
AACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTT > SRR19973061.2661959/1‑150 (MQ=60)
ACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTA > SRR19973061.2517781/1‑150 (MQ=60)
GTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCC < SRR19973061.1682909/150‑1 (MQ=60)
GTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCAC > SRR19973061.488854/1‑150 (MQ=60)
ANATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTCTGTCTTATCCCACGG > SRR19973061.872253/1‑150 (MQ=60)
TATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTAT > SRR19973061.656380/1‑150 (MQ=60)
TATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTAT > SRR19973061.1222960/1‑150 (MQ=60)
GCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATA < SRR19973061.3348763/150‑1 (MQ=60)
CAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATG > SRR19973061.1444431/1‑150 (MQ=60)
CAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATG > SRR19973061.3345368/1‑150 (MQ=60)
CAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATG > SRR19973061.3094274/1‑150 (MQ=60)
GGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGT > SRR19973061.363317/1‑150 (MQ=60)
GGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGT < SRR19973061.1541548/150‑1 (MQ=60)
GGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGT < SRR19973061.1541829/150‑1 (MQ=60)
GAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTT < SRR19973061.2260123/150‑1 (MQ=60)
GAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTT < SRR19973061.2260129/150‑1 (MQ=60)
GGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCA > SRR19973061.2091263/1‑150 (MQ=60)
GGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCA > SRR19973061.3466534/1‑150 (MQ=60)
GGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCAT > SRR19973061.1736711/1‑150 (MQ=60)
GAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATT < SRR19973061.1054465/150‑1 (MQ=60)
GAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATAAACAACATGAAGGTTGAATTACCGTGTCAATTACTAACCACTTCAATTGTTATTTCATATCCCACGGTATTTAATATGTTTCATT > SRR19973061.3165196/1‑150 (MQ=60)
AGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTA < SRR19973061.1584056/150‑1 (MQ=60)
GAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAG > SRR19973061.3461671/1‑150 (MQ=60)
AATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGA > SRR19973061.450542/1‑150 (MQ=60)
ATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGAT > SRR19973061.1908293/1‑150 (MQ=60)
ATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGAT > SRR19973061.3807306/1‑150 (MQ=60)
ATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGAT > SRR19973061.3334544/1‑150 (MQ=60)
AGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTT > SRR19973061.3090588/1‑150 (MQ=60)
AGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTT > SRR19973061.3694388/1‑150 (MQ=60)
ATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTC < SRR19973061.1952185/150‑1 (MQ=60)
TTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCT > SRR19973061.1912606/1‑150 (MQ=60)
TTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCT < SRR19973061.1081904/150‑1 (MQ=60)
TGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTT < SRR19973061.1937375/150‑1 (MQ=60)
ATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGA > SRR19973061.503494/1‑150 (MQ=60)
ATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGA < SRR19973061.1785412/150‑1 (MQ=60)
ATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGA < SRR19973061.1785396/150‑1 (MQ=60)
ACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTAAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATT > SRR19973061.1681509/1‑150 (MQ=60)
GATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGC < SRR19973061.1607017/150‑1 (MQ=60)
TGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCAT < SRR19973061.1383914/150‑1 (MQ=60)
TGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCAT > SRR19973061.2000970/1‑150 (MQ=60)
ATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATAT > SRR19973061.1235151/1‑150 (MQ=60)
TCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATG < SRR19973061.376393/150‑1 (MQ=60)
TCATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATG < SRR19973061.1262366/150‑1 (MQ=60)
CATTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGA < SRR19973061.2559655/150‑1 (MQ=60)
TTTTCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGT < SRR19973061.547018/150‑1 (MQ=60)
TCATATTACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATA < SRR19973061.229634/150‑1 (MQ=60)
TACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCC > SRR19973061.2880129/1‑150 (MQ=60)
ACCCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCC > SRR19973061.520836/1‑150 (MQ=60)
CCCATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCC > SRR19973061.2466516/1‑150 (MQ=60)
CATATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCC < SRR19973061.1200431/150‑1 (MQ=60)
TATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTC > SRR19973061.2497375/1‑150 (MQ=60)
TATGGCTGAAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTC > SRR19973061.587505/1‑150 (MQ=60)
AAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGATTATATTACACCCCCCTCAAAAAAAA > SRR19973061.855021/1‑150 (MQ=60)
AAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAAT > SRR19973061.1298913/1‑150 (MQ=60)
AAAAAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAAT > SRR19973061.3655738/1‑150 (MQ=60)
AAGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAA > SRR19973061.316575/1‑150 (MQ=60)
AGATATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAACCCCCCCTCAAAAAAATAAAT > SRR19973061.1078312/1‑150 (MQ=60)
GATATACAAAATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATT < SRR19973061.2602022/150‑1 (MQ=60)
TATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAA > SRR19973061.2619946/1‑150 (MQ=60)
ATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAAT < SRR19973061.499309/150‑1 (MQ=60)
ATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAAT < SRR19973061.499227/150‑1 (MQ=60)
ATACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAAT < SRR19973061.3370033/150‑1 (MQ=60)
TACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATT > SRR19973061.2116471/1‑150 (MQ=60)
TACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATT > SRR19973061.1166105/1‑150 (MQ=60)
TACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATT > SRR19973061.2116307/1‑150 (MQ=60)
TACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATT > SRR19973061.201063/1‑150 (MQ=60)
TACAACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAACCCCCCCTCAAAAAAATAAATTAATT > SRR19973061.2115969/1‑150 (MQ=60)
AACATGTAGGGTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAA < SRR19973061.3621041/150‑1 (MQ=60)
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GATGTGATAAATAGTAATAGGATATTCTTTATCCTTAAGGATAATACCAGACTTAACCGGTGTAAATATACTGCCAGGAGGGAGAAATATAGTAGATTGATACCAGATGATCATTTTCATATTACCCCATATGGCTGAAAAAGATATACCACATGTAGGTTGAATTACCGTGTCAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAA > CP009273/1207268‑1207566
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |