Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F247 I0 R1 1496 299.8 9582018 97.8% 9371213 149.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,290,033 G→T 86.2% pseudogene (416/567 nt) insZ ← pseudogene, transposase homolog

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,290,0330GT86.2% 684.2 / 107.4 285pseudogene (416/567 nt)insZpseudogene, transposase homolog
Reads supporting (aligned to +/- strand):  ref base G (20/20);  new base T (118/127);  total (138/147)
Fisher's exact test for biased strand distribution p-value = 8.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 285 total aligned reads displayed.

AGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATCCG  >  CP009273/1289889‑1290180
                                                                                                                                                |                                                                                                                                                   
agagGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGc                                                                                                                                                 <  2:4518279/149‑1 (MQ=255)
     agCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCgtgt                                                                                                                                            <  1:3541275/149‑1 (MQ=255)
      gCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGtt                                                                                                                                           >  2:4697405/1‑149 (MQ=255)
             tATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGc                                                                                                                                    <  2:4546468/149‑1 (MQ=255)
              aTGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGct                                                                                                                                   >  1:2529470/1‑149 (MQ=255)
               tGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGctc                                                                                                                                  >  2:3018218/1‑149 (MQ=255)
                   tCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATc                                                                                                                              <  2:1115810/149‑1 (MQ=255)
                   tCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATc                                                                                                                              >  2:291098/1‑149 (MQ=255)
                     acaGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCAt                                                                                                                            <  1:656851/149‑1 (MQ=255)
                       aGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCAttt                                                                                                                          >  2:2832470/1‑149 (MQ=255)
                       aGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTGTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCACCTCTATCAttt                                                                                                                          >  2:4138085/1‑149 (MQ=255)
                        ggATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTc                                                                                                                         <  1:4367251/149‑1 (MQ=255)
                         gATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTTTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTTACGCCGTGTTTACCAGCTCTATAAtttat                                                                                                                        >  1:211070/1‑147 (MQ=255)
                         gATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACATCCAGAGCACCCCGAAGATGCTCCATTCGTGTCGGGATGGTACCAGGTGAACCCCTGTTTCCCACCACTAACAtttat                                                                                                                        >  1:1834222/1‑147 (MQ=255)
                          aTAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCAATTCTg                                                                                                                       >  2:3846047/1‑149 (MQ=255)
                           tAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCAATTCTGa                                                                                                                      >  2:648509/1‑149 (MQ=255)
                                ggTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGa                                                                                                                 <  2:4761088/149‑1 (MQ=255)
                                  tttttGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGata                                                                                                               <  1:3766095/149‑1 (MQ=255)
                                   ttttGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGatat                                                                                                              <  1:1737461/149‑1 (MQ=255)
                                     ttGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATAttc                                                                                                            <  2:2693289/149‑1 (MQ=255)
                                     ttGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATAttc                                                                                                            <  2:1972579/149‑1 (MQ=255)
                                      tGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATAttct                                                                                                           <  1:150940/149‑1 (MQ=255)
                                         tatCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATTCGATATTATTcc                                                                                                        >  1:2603168/1‑149 (MQ=255)
                                           tCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCAc                                                                                                      <  1:2160442/149‑1 (MQ=255)
                                                aCCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTCCCAGCTCTATCATTTATGATGCGATATTATTCCACgcagg                                                                                                 >  2:525089/1‑149 (MQ=255)
                                                aCCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGTTTGTCCCAGGTTAACCCCTGTTTACCACCTCAATAAATTAAGATGCGCTATTCTTACACccacg                                                                                                 >  1:4487441/1‑147 (MQ=255)
                                                   gACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTGACGCCGGGTTTCCCAGCTCTATCATTTCTGATGCGATATTATTACACgcaggcag                                                                                              >  1:3048863/1‑149 (MQ=255)
                                                    aCCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTATGATGCGATATTCTTACACGCAGGCAGt                                                                                             >  2:1566847/1‑149 (MQ=255)
                                                     ccTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTCCCAGCTCTATCATTTATGATGCGATATTCTTACACGCAGGCAGTa                                                                                            >  2:3732263/1‑149 (MQ=255)
                                                       tCGGCCTTGATGGTCGGGTGCGTTTTGTTATGAACACCACATCCAGAGCACCCCCAAGATGCTCCAGTCGTTTCCGGATGGTCCCAGGGTAAGCCGTGTTTCCCAGCTCTATCAATTCTGATGCGATAATCTTCCACGCAGGCAGTAGc                                                                                          >  2:4519393/1‑149 (MQ=255)
                                                       tCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGCAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGc                                                                                          <  2:4709089/149‑1 (MQ=255)
                                                       tCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTACCAGGTGACGCCGTGTTTCCCAGCTCTATCATTTCAGATGCGATAATCATCCACGCAGGCAGTAGc                                                                                          >  2:3122835/1‑149 (MQ=255)
                                                        cGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGcc                                                                                         <  1:2494687/149‑1 (MQ=255)
                                                            cTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTg                                                                                     >  2:1959866/1‑149 (MQ=255)
                                                            cTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTg                                                                                     <  2:2346589/149‑1 (MQ=255)
                                                            cTTGAAGGTCGGGGGCGTTTTGTTATTAACACCACTTCCAGAGCACCCCGAAGATGCACCAGTCGTTTCCGGATGGTCCCAGGGTAAGCCCTGTTTCCCAGCACAAACAATTCAGAAGCGATAATCTTCCACCCACGCACAACCCAGTg                                                                                     >  2:2073771/1‑149 (MQ=255)
                                                                         ggCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAAccc                                                                        <  2:1847411/149‑1 (MQ=255)
                                                                         ggCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAAccc                                                                        <  1:3633817/149‑1 (MQ=255)
                                                                            gTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTc                                                                     >  2:3093732/1‑149 (MQ=255)
                                                                             ttttGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTACACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCt                                                                    >  2:2159347/1‑149 (MQ=255)
                                                                              tttGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTg                                                                   <  2:4037908/149‑1 (MQ=255)
                                                                                tGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGt                                                                 <  1:4591115/149‑1 (MQ=255)
                                                                                 gTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGtt                                                                >  2:467182/1‑149 (MQ=255)
                                                                                 gTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCGTCTGGtt                                                                >  2:2246801/1‑149 (MQ=255)
                                                                                  ttATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGGTGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTATTCCACGCAGGCCGTAGCCAGTGGCGGTTACAACCCTTCTGGTTc                                                               >  1:4213370/1‑149 (MQ=255)
                                                                                    aTGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAg                                                             <  1:4173600/149‑1 (MQ=255)
                                                                                     tGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGc                                                            <  2:1644836/149‑1 (MQ=255)
                                                                                     tGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGc                                                            >  2:4615504/1‑149 (MQ=255)
                                                                                     tGAACACCACTCCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGc                                                            <  1:4262155/149‑1 (MQ=255)
                                                                                      gAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCCTTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCGTCTGGTTCAGCg                                                           >  1:4357314/1‑149 (MQ=255)
                                                                                       aaCACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGt                                                          <  1:2813055/149‑1 (MQ=255)
                                                                                       aaCACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCAGTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGt                                                          >  1:1574410/1‑149 (MQ=255)
                                                                                         caccacTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTAACATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCCGTGGCGGTTAAAACCCGTCTGGTTCATCGTca                                                        >  2:3595222/1‑149 (MQ=255)
                                                                                          accacGTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTcag                                                       <  2:4464200/149‑1 (MQ=255)
                                                                                           ccacTTCCAGAGCACCCCGAAGATGCTCCAGTCGTGTCGGGCTGGTCCCAGGTTAAGCCGTGTTTACCAGCTATATCATTTGTGATGCGATATTCTTCCACGCAGGCAGTATCCAGTGGCGGTTACAAACCATCTGGTTCAGCGTcagc                                                      >  1:808428/1‑149 (MQ=255)
                                                                                              cTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCGTCTGGTTCAGCGTcagcagc                                                   >  2:1425681/1‑149 (MQ=255)
                                                                                                tCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTcagcagcag                                                 <  2:2529470/149‑1 (MQ=255)
                                                                                                   agagCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTc                                              <  1:3795041/149‑1 (MQ=255)
                                                                                                     agCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCtt                                            <  2:1705957/149‑1 (MQ=255)
                                                                                                     agCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCtt                                            <  1:2833867/149‑1 (MQ=255)
                                                                                                     agCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCtt                                            <  2:2489810/149‑1 (MQ=255)
                                                                                                      gCACCCAGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTc                                           <  1:3341743/149‑1 (MQ=255)
                                                                                                        aCCCCGAAGATGCTCCAGTCGTTTCGGGTTGGTACCTGGTGACGCCGTGTTTACCAGCACTAAAATTTATGATGGGAGATTATTACAAGCAGGCAGTAGCCAGTGGCGGTTAAAACCCTTCTGGTTAAGCGTCAGCAGCAGGTCttatc                                         >  1:3033524/1‑146 (MQ=255)
                                                                                                        aCCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGc                                         <  1:3246804/149‑1 (MQ=255)
                                                                                                         ccccGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCCGGGGCGGTTACAACCCATCTGGTTCAGCGTCAGCCGCAGGTCTTCGCt                                        >  1:3074323/1‑149 (MQ=255)
                                                                                                         ccccGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCATCTGGTTCAGCGGCAGCAGCCGGTCTTCGcg                                        >  1:237958/1‑148 (MQ=255)
                                                                                                          cccGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTg                                       <  2:4315639/149‑1 (MQ=255)
                                                                                                          cccGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATAATTTCTGATTCGATATTATTCCACGCAGGCAGTAGCCACTGGCGGTTACAAACCTTCTGGTTAATCGGCAGCAGCAGGTCTTCGcgg                                       >  1:1280817/1‑147 (MQ=255)
                                                                                                           ccGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCAATTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCCGTGGCGGTTACAACCCATCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGt                                      >  1:3328697/1‑149 (MQ=255)
                                                                                                             gAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTaa                                    >  2:3467108/1‑149 (MQ=255)
                                                                                                             gAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTAGCTGTaa                                    >  2:4025893/1‑149 (MQ=255)
                                                                                                             gAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCAATTATGATGCGATAATATTCCACGCAGGCAGTATCCAGTGGCGGTTAAAAACCTTCTGGTTCAGCGTCAGCCGCAGGTCTTAGCTGTaa                                    >  1:93807/1‑149 (MQ=255)
                                                                                                             gAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTCCCCGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCCCTGGCGGTTACAACCCGTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGGaa                                    >  1:2340726/1‑149 (MQ=255)
                                                                                                              aaGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTaaa                                   >  2:4244457/1‑149 (MQ=255)
                                                                                                              aaGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTaaa                                   >  1:4699672/1‑149 (MQ=255)
                                                                                                                  tGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCATCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAg                               >  1:3982879/1‑149 (MQ=255)
                                                                                                                     tCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGttt                            <  2:264945/149‑1 (MQ=255)
                                                                                                                      ccAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTa                           <  2:84592/149‑1 (MQ=255)
                                                                                                                      ccAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTa                           >  2:2586558/1‑149 (MQ=255)
                                                                                                                           cGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCaaa                      <  2:406192/149‑1 (MQ=255)
                                                                                                                            gTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAaac                     <  1:824354/149‑1 (MQ=255)
                                                                                                                              ttCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAaacaa                   <  2:118972/149‑1 (MQ=255)
                                                                                                                                  ggATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTa               <  1:2413655/149‑1 (MQ=255)
                                                                                                                                   gATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTaa              <  1:2941105/149‑1 (MQ=255)
                                                                                                                                   gATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTaa              >  2:1815664/1‑149 (MQ=255)
                                                                                                                                    aTGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAAt             <  2:4604273/149‑1 (MQ=255)
                                                                                                                                     tGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATa            <  1:3209436/149‑1 (MQ=255)
                                                                                                                                     tGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATa            >  1:2760030/1‑149 (MQ=255)
                                                                                                                                      ggTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCGTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATag           <  2:1278841/149‑1 (MQ=255)
                                                                                                                                       gTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATaga          >  1:4152379/1‑149 (MQ=255)
                                                                                                                                       gTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATaga          <  1:612534/149‑1 (MQ=255)
                                                                                                                                       gTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATaga          <  1:1961207/149‑1 (MQ=255)
                                                                                                                                       gTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATaga          <  2:809974/149‑1 (MQ=255)
                                                                                                                                       gTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATaga          <  2:3199296/149‑1 (MQ=255)
                                                                                                                                        tCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATagag         <  1:2716761/149‑1 (MQ=255)
                                                                                                                                        tCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGGAATagag         >  2:2977110/1‑149 (MQ=255)
                                                                                                                                         cccTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGt        >  1:144055/1‑149 (MQ=255)
                                                                                                                                           cTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGCTGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTACGCTGTAAAAAAGTTTATCAAAAAACGTAATAGAGttc      >  2:2500374/1‑148 (MQ=255)
                                                                                                                                            tGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTAt     <  2:1557271/149‑1 (MQ=255)
                                                                                                                                               tGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGACATAGAGATATCCg  >  1:111554/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
AGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATCCG  >  CP009273/1289889‑1290180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATCCGG  >  CP009273/1289885‑1290181
                                                                                                                                                    |                                                                                                                                                    
CTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTA                                                                                                                                                     <  SRR19973071.3062187/150‑1 (MQ=60)
      AGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTTACGCCGT                                                                                                                                               >  SRR19973071.2995350/1‑150 (MQ=60)
       GGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTG                                                                                                                                              <  SRR19973071.145092/150‑1 (MQ=60)
       GGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGGG                                                                                                                                              >  SRR19973071.207989/1‑150 (MQ=60)
         AGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTT                                                                                                                                            <  SRR19973071.3553651/150‑1 (MQ=60)
            GGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCC                                                                                                                                         <  SRR19973071.927745/150‑1 (MQ=60)
               ACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAG                                                                                                                                      <  SRR19973071.617762/150‑1 (MQ=60)
               ACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAG                                                                                                                                      <  SRR19973071.466830/150‑1 (MQ=60)
                 TATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACCCCGTGTTTACCAGCT                                                                                                                                    >  SRR19973071.2538671/1‑150 (MQ=60)
                   TGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCT                                                                                                                                  <  SRR19973071.1777918/150‑1 (MQ=60)
                      TTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGGGTTTCCCAGCACTATC                                                                                                                               >  SRR19973071.4201961/1‑150 (MQ=60)
                      TTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTACCAGGTTACGCCGTGTTTACCAGCACAATC                                                                                                                               >  SRR19973071.2410546/1‑150 (MQ=60)
                         ACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATT                                                                                                                            <  SRR19973071.659239/150‑1 (MQ=60)
                          CAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTT                                                                                                                           <  SRR19973071.3084606/150‑1 (MQ=60)
                          CAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTT                                                                                                                           <  SRR19973071.3084586/150‑1 (MQ=60)
                            GGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTTTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTTACGCCGTGTTTACCAGCTCTATAATTTAT                                                                                                                         >  SRR19973071.211919/1‑150 (MQ=60)
                            GGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCT                                                                                                                         <  SRR19973071.4382612/150‑1 (MQ=60)
                            GGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCT                                                                                                                         <  SRR19973071.3788381/150‑1 (MQ=60)
                             GATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTG                                                                                                                        <  SRR19973071.274430/150‑1 (MQ=60)
                               TAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGAT                                                                                                                      <  SRR19973071.2828406/150‑1 (MQ=60)
                               TAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGAT                                                                                                                      >  SRR19973071.1506991/1‑150 (MQ=60)
                               TAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTACCTGGGTAAGCCGTGTTTGCCAGCTCTATAATTTGTGAT                                                                                                                      >  SRR19973071.3312470/1‑150 (MQ=60)
                                     GTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATA                                                                                                                <  SRR19973071.2876265/150‑1 (MQ=60)
                                      TTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATAT                                                                                                               <  SRR19973071.3779483/150‑1 (MQ=60)
                                       TTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATT                                                                                                              <  SRR19973071.1743937/150‑1 (MQ=60)
                                       TTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATT                                                                                                              <  SRR19973071.930942/150‑1 (MQ=60)
                                        TTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTACCAGCACTATCATTTATGATTCGATATTA                                                                                                             >  SRR19973071.3915398/1‑150 (MQ=60)
                                          TGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTT                                                                                                           <  SRR19973071.151625/150‑1 (MQ=60)
                                            ATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATTCGATATTATTCC                                                                                                         >  SRR19973071.2612582/1‑150 (MQ=60)
                                              ATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCAC                                                                                                       <  SRR19973071.2457234/150‑1 (MQ=60)
                                              ATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTTACGCCGGGTTTACCAGCTCaataaattatgtttcgatattattaaac                                                                                                       >  SRR19973071.2112725/1‑122 (MQ=60)
                                               TCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACG                                                                                                      <  SRR19973071.2168429/150‑1 (MQ=60)
                                               TCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACG                                                                                                      <  SRR19973071.2168269/150‑1 (MQ=60)
                                               TCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACG                                                                                                      <  SRR19973071.2168194/150‑1 (MQ=60)
                                                   AACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACATCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCAGGTTACGCCGggtttaccaacgcaatcaattattattcgctattaatacacccagg                                                                                                  >  SRR19973071.4503345/1‑104 (MQ=60)
                                                      CGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAG                                                                                               <  SRR19973071.1641087/150‑1 (MQ=60)
                                                      CGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAG                                                                                               <  SRR19973071.490136/150‑1 (MQ=60)
                                                      CGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTGACGCCGTGTTTCCCAGCTCTATAAATTATGATGCGATATTCTTacaccccggcac                                                                                               >  SRR19973071.3059102/1‑138 (MQ=60)
                                                      CGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTGACGCCGGGTTTCCCAGCTCTATCATTTCTGATGCGATATTATTACACGCAGGCAG                                                                                               >  SRR19973071.3059695/1‑150 (MQ=60)
                                                       GACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGT                                                                                              <  SRR19973071.1545915/150‑1 (MQ=60)
                                                         CCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAG                                                                                            <  SRR19973071.812932/150‑1 (MQ=60)
                                                         CCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCAGGTTACGCCGTGTTTACCAGCTCTATCATTTATGATTCGATATTATTACACGCCGGCAGTAG                                                                                            >  SRR19973071.2290999/1‑150 (MQ=60)
                                                            CGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCA                                                                                         <  SRR19973071.2626568/150‑1 (MQ=60)
                                                            CGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCA                                                                                         <  SRR19973071.113316/150‑1 (MQ=60)
                                                            CGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCA                                                                                         <  SRR19973071.2503766/150‑1 (MQ=60)
                                                                  TGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCG                                                                                   <  SRR19973071.1903727/150‑1 (MQ=60)
                                                                             GGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGCTGGTCCCAGGTGACGCCGTGTTTCCCACCTCTATAATTTATGATTCGATATTCTTACACCCAGGCAGTAGCCACTGGCGGTTACAACCCA                                                                        >  SRR19973071.4081439/1‑150 (MQ=60)
                                                                             GGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCT                                                                        <  SRR19973071.3646586/150‑1 (MQ=60)
                                                                                GTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCT                                                                     >  SRR19973071.2750316/1‑150 (MQ=60)
                                                                                GTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTATTCCACGCAGGCAGTAGCCCGTGGCGGTTACAACCCTTCT                                                                     >  SRR19973071.2458417/1‑150 (MQ=60)
                                                                                GTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTGTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCGTCT                                                                     >  SRR19973071.4280647/1‑150 (MQ=60)
                                                                                    TGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTT                                                                 <  SRR19973071.4607480/150‑1 (MQ=60)
                                                                                     GTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGGTGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTATTCCACGCAGGCCGTAGCCAGTGGCGGTTACAACCCTTCTGGTTC                                                                >  SRR19973071.4228354/1‑150 (MQ=60)
                                                                                      TTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATAATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCA                                                               >  SRR19973071.3051900/1‑150 (MQ=60)
                                                                                        ATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGC                                                             <  SRR19973071.4188458/150‑1 (MQ=60)
                                                                                         TGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCCTTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCGTCTGGTTCAGCG                                                            >  SRR19973071.4372655/1‑150 (MQ=60)
                                                                                         TGAACACCACTCCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCG                                                            <  SRR19973071.4277304/150‑1 (MQ=60)
                                                                                         TGAACACCACTCCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCG                                                            <  SRR19973071.4277271/150‑1 (MQ=60)
                                                                                         TGAACACCACTCCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCG                                                            <  SRR19973071.4277270/150‑1 (MQ=60)
                                                                                          GAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTATCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGT                                                           >  SRR19973071.3978040/1‑150 (MQ=60)
                                                                                          GAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCAGTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGT                                                           >  SRR19973071.1579991/1‑150 (MQ=60)
                                                                                          GAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGGGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGT                                                           >  SRR19973071.1580018/1‑150 (MQ=60)
                                                                                           AACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTC                                                          <  SRR19973071.2823278/150‑1 (MQ=60)
                                                                                           AACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTC                                                          <  SRR19973071.2822991/150‑1 (MQ=60)
                                                                                           AACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTC                                                          <  SRR19973071.2822987/150‑1 (MQ=60)
                                                                                            ACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCA                                                         <  SRR19973071.4196251/150‑1 (MQ=60)
                                                                                              ACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGC                                                       >  SRR19973071.351374/1‑150 (MQ=60)
                                                                                              ACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTGTCGGGCTGGTCCCAGGTTAAGCCGTGTTTACCAGCTATATCATTTGTGATGCGATATTCTTCCACGCAGGCAGTATCCAGTGGCGGTTACAAACCATCTGGTTCAGCGTCAGC                                                       >  SRR19973071.811140/1‑150 (MQ=60)
                                                                                               CCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCGTCTGGTTCAGCGTCAGCA                                                      >  SRR19973071.323037/1‑150 (MQ=60)
                                                                                                CACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAG                                                     <  SRR19973071.3223455/150‑1 (MQ=60)
                                                                                                CACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAG                                                     <  SRR19973071.2881995/150‑1 (MQ=60)
                                                                                                       AGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCT                                              <  SRR19973071.3808529/150‑1 (MQ=60)
                                                                                                       AGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCT                                              <  SRR19973071.3808525/150‑1 (MQ=60)
                                                                                                       AGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCT                                              <  SRR19973071.426218/150‑1 (MQ=60)
                                                                                                       AGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCT                                              <  SRR19973071.2261456/150‑1 (MQ=60)
                                                                                                         GGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCGGGTGCCGCCGGGTTTACCAGCTCTATCATTTCTGATGCGCTATTATTCCACCCCGGCCGTAGCCACGGGCGGGTACAACCCCTCCGGTTCAGCGTCAGCAGCcgggcgtc                                            >  SRR19973071.3740607/1‑142 (MQ=60)
                                                                                                         AGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTC                                            <  SRR19973071.1789256/150‑1 (MQ=60)
                                                                                                         AGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTC                                            >  SRR19973071.2695679/1‑150 (MQ=60)
                                                                                                         AGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTC                                            <  SRR19973071.2843925/150‑1 (MQ=60)
                                                                                                          GCACCCAGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCG                                           <  SRR19973071.3353588/150‑1 (MQ=60)
                                                                                                           CACCCCGAAGATGCTCCAGTCGTTTCGGGTTGGTACCTGGTGACGCCGTGTTTACCAGCACTAAAATTTATGATGGGAGATTATTACAAGCAGGCAGTAGCCAGTGGCGGTTAAAACCCTTCTGGTTAAGCGTCAGCAGCAGGTCTTatc                                          >  SRR19973071.3044317/1‑147 (MQ=60)
                                                                                                            ACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCCGGGGCGGTTACAACCCATCTGGTTCAGCGTCAGCCGCAGGTCTTCGCT                                         >  SRR19973071.3085207/1‑150 (MQ=60)
                                                                                                            ACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCT                                         <  SRR19973071.2551132/150‑1 (MQ=60)
                                                                                                            ACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCT                                         <  SRR19973071.4525794/150‑1 (MQ=60)
                                                                                                            ACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCT                                         <  SRR19973071.3258256/150‑1 (MQ=60)
                                                                                                            ACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCG                                         >  SRR19973071.3198862/1‑150 (MQ=60)
                                                                                                            ACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCATCTGGTTCAGCGGCAGCAGCCGGTCTTCGCG                                         >  SRR19973071.238875/1‑150 (MQ=60)
                                                                                                            ACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATGTCTGATGCGATATTCTTCCACGCAGGTAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCT                                         <  SRR19973071.2551164/150‑1 (MQ=60)
                                                                                                             CCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTG                                        <  SRR19973071.707902/150‑1 (MQ=60)
                                                                                                             CCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTG                                        <  SRR19973071.3107285/150‑1 (MQ=60)
                                                                                                             CCCCGAAGATGCTCCAGTCGTTTAGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATAATTTCTGATTCGATATTATTCCACGCAGGCAGTAGCCACTGGCGGTTACAAACCTTCTGGTTAATCGGCAGCAGCAGGTCTTCGCGG                                        >  SRR19973071.1285467/1‑150 (MQ=60)
                                                                                                              CCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCAATTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCCGTGGCGGTTACAACCCATCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGT                                       >  SRR19973071.3340494/1‑150 (MQ=60)
                                                                                                              CCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATAATTTATGATGCGATATTCTTACACGCAGGCAGTAGCCAGTGGCGGTTAAAACCCATCTGGTTAAGCGTCAGCAGCAGGTCTTAGCTGT                                       >  SRR19973071.3340448/1‑150 (MQ=60)
                                                                                                              CCCGAAGATGCTCCAGTCGTGTCGGGATGGTCCCATGTTACGCCGTGTTTCCCAGCTCTATCATTTATGATTCGATATTCTTACACCCAGGCAGTATCCAGTGGCGGTTAAAAACCATCTGGTTCAGCGTCAGCACCAGGTCTTCGCTGT                                       >  SRR19973071.3340498/1‑150 (MQ=60)
                                                                                                               CCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTA                                      <  SRR19973071.2375672/150‑1 (MQ=60)
                                                                                                               CCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTA                                      <  SRR19973071.2375703/150‑1 (MQ=60)
                                                                                                               CCGAAGATGCTCCAGTCGTGTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTATGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAAACCGTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCggga                                      >  SRR19973071.4377815/1‑146 (MQ=60)
                                                                                                                CGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCAATTATGATGCGATAATATTCCACGCAGGCAGTATCCAGTGGCGGTTAAAAACCTTCTGGTTCAGCGTCAGCCGCAGGTCTTAGCTGTAA                                     >  SRR19973071.94295/1‑150 (MQ=60)
                                                                                                                CGAAGATGCTCCAGTCGTTTCGGGATGGTCCCAGGTTACGCCGTGTTTCCCCGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCCCTGGCGGTTACAACCCGTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGGAA                                     >  SRR19973071.2349226/1‑150 (MQ=60)
                                                                                                                 GAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAA                                    >  SRR19973071.4716355/1‑150 (MQ=60)
                                                                                                                    GATGCTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCGTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAA                                 <  SRR19973071.4376247/150‑1 (MQ=60)
                                                                                                                     ATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCATCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAG                                >  SRR19973071.3996818/1‑150 (MQ=60)
                                                                                                                        CTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTT                             <  SRR19973071.2504931/150‑1 (MQ=60)
                                                                                                                        CTCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTT                             <  SRR19973071.3713405/150‑1 (MQ=60)
                                                                                                                         TCCAGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCGTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTA                            <  SRR19973071.142896/150‑1 (MQ=60)
                                                                                                                            AGTCGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATAATTTCTGATGCGATATTATTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATAA                         >  SRR19973071.985167/1‑150 (MQ=60)
                                                                                                                               CGTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAAC                      <  SRR19973071.3608706/150‑1 (MQ=60)
                                                                                                                                GTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACA                     <  SRR19973071.827200/150‑1 (MQ=60)
                                                                                                                                GTTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACA                     <  SRR19973071.827189/150‑1 (MQ=60)
                                                                                                                                 TTTCGGGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAA                    <  SRR19973071.3524916/150‑1 (MQ=60)
                                                                                                                                      GGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAA               <  SRR19973071.2422367/150‑1 (MQ=60)
                                                                                                                                      GGATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAA               <  SRR19973071.2422330/150‑1 (MQ=60)
                                                                                                                                       GATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAAT              <  SRR19973071.2951641/150‑1 (MQ=60)
                                                                                                                                       GATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAAT              <  SRR19973071.746735/150‑1 (MQ=60)
                                                                                                                                        ATGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATA             >  SRR19973071.2769776/1‑150 (MQ=60)
                                                                                                                                         TGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAG            <  SRR19973071.3220672/150‑1 (MQ=60)
                                                                                                                                         TGGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAG            <  SRR19973071.4514240/150‑1 (MQ=60)
                                                                                                                                          GGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGA           >  SRR19973071.4167166/1‑150 (MQ=60)
                                                                                                                                          GGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGA           >  SRR19973071.4167154/1‑150 (MQ=60)
                                                                                                                                          GGTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGA           >  SRR19973071.4167172/1‑150 (MQ=60)
                                                                                                                                           GTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAG          <  SRR19973071.614800/150‑1 (MQ=60)
                                                                                                                                           GTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAG          <  SRR19973071.615182/150‑1 (MQ=60)
                                                                                                                                           GTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAG          <  SRR19973071.1519386/150‑1 (MQ=60)
                                                                                                                                           GTCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAG          <  SRR19973071.1968325/150‑1 (MQ=60)
                                                                                                                                            TCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGT         >  SRR19973071.144723/1‑150 (MQ=60)
                                                                                                                                            TCCCTGGTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGT         <  SRR19973071.2726433/150‑1 (MQ=60)
                                                                                                                                                TGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATC     >  SRR19973071.1402096/1‑150 (MQ=60)
                                                                                                                                                  GTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATCCG   <  SRR19973071.124605/150‑1 (MQ=60)
                                                                                                                                                  GTTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATCCG   <  SRR19973071.124490/150‑1 (MQ=60)
                                                                                                                                                  GTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGACATAGAGATATCCG   >  SRR19973071.112107/1‑150 (MQ=60)
                                                                                                                                                   TTACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATCCGG  >  SRR19973071.4777152/1‑150 (MQ=60)
                                                                                                                                                    |                                                                                                                                                    
CTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAGATGCTCCAGTCGTTTCGGGATGGTCCCTGGTGACGCCGTGTTTCCCAGCTCTATCATTTCTGATGCGATATTCTTCCACGCAGGCAGTAGCCAGTGGCGGTTACAACCCTTCTGGTTCAGCGTCAGCAGCAGGTCTTCGCTGTAAAAAAGTTTATCAAACAACGTAATAGAGTTATCCGG  >  CP009273/1289885‑1290181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: