Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F204 I0 R1
|
1155 |
255.8 |
8356456 |
95.7% |
7997128 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
1,372,069 |
G→T |
45.2% |
E327D (GAG→GAT) |
ycjS → |
putative NADH‑binding oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 1,372,069 | 0 | G | T | 45.2%
| 192.4
/ inf
| 243 | E327D (GAG→GAT) | ycjS | putative NADH‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (57/76); new base T (50/60); total (107/136) |
| Fisher's exact test for biased strand distribution p-value = 6.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 |
Only 100 of 248 total aligned reads displayed.
CTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAG > CP009273/1371920‑1372218
|
cTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAg > 1:3166495/1‑150 (MQ=255)
cTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAg > 1:2382962/1‑150 (MQ=255)
gTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCa < 1:3983446/150‑1 (MQ=255)
ttCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAgg > 1:349978/1‑150 (MQ=255)
tCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAggg > 1:1971734/1‑150 (MQ=255)
cAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGt > 1:908813/1‑150 (MQ=255)
cacaTATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTAca > 1:1170608/1‑150 (MQ=255)
caTATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTAcatc < 1:2829283/150‑1 (MQ=255)
tCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATcc < 1:3699206/150‑1 (MQ=255)
cTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCa < 2:2059973/150‑1 (MQ=255)
tACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAg < 2:1346449/150‑1 (MQ=255)
tACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAg > 2:2063975/1‑150 (MQ=255)
cacCGATAACAACGGTGAATTAATGACGCTGCTGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCa < 1:735895/150‑1 (MQ=255)
cacCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCa > 1:3467131/1‑150 (MQ=255)
cacCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCa > 2:1527311/1‑150 (MQ=255)
gATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtg > 2:453766/1‑150 (MQ=255)
aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg < 1:462216/150‑1 (MQ=255)
aTAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtgg < 2:565381/150‑1 (MQ=255)
aacaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtggtg < 2:1321399/150‑1 (MQ=255)
aacaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACtggtg < 2:1321386/150‑1 (MQ=255)
acaacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACtggtgg < 1:3786331/150‑1 (MQ=255)
caacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTggc < 1:1803910/150‑1 (MQ=255)
aacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTggcg < 2:2975575/150‑1 (MQ=255)
aacGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTggcg < 2:2503164/150‑1 (MQ=255)
ggTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGgcggcg < 1:1303859/150‑1 (MQ=255)
gTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGt > 2:625255/1‑150 (MQ=255)
tGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGtt < 1:1187296/150‑1 (MQ=255)
gAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTCCATCATCCAGCAACTGGTGGCGGCGTTg > 2:2632306/1‑150 (MQ=255)
aaTTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGt < 2:3959147/150‑1 (MQ=255)
aaTTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGt < 2:3147903/150‑1 (MQ=255)
ttAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTAt > 1:227435/1‑150 (MQ=255)
ttAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTAt > 2:2675262/1‑150 (MQ=255)
tGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAAt < 2:3055090/150‑1 (MQ=255)
aCGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATcc < 1:1771413/150‑1 (MQ=255)
aTGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGaa > 1:3502811/1‑150 (MQ=255)
cAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACa < 2:3661036/150‑1 (MQ=255)
aaCGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAg > 1:1611341/1‑150 (MQ=255)
cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTCCAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAggg < 2:1912505/150‑1 (MQ=255)
cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGTAGAAACAggg < 1:1051167/150‑1 (MQ=255)
cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAggg > 2:1858534/1‑150 (MQ=255)
cGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAggg < 1:2065713/150‑1 (MQ=255)
gggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGa > 2:4111300/1‑150 (MQ=255)
ggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAc < 1:2543839/150‑1 (MQ=255)
ggAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAc < 1:1916920/150‑1 (MQ=255)
aaaTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAcgc > 1:1024242/1‑150 (MQ=255)
aaTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAcgcg > 1:4089111/1‑150 (MQ=255)
aaTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGAcgcg > 1:688975/1‑150 (MQ=255)
aTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgt > 1:570260/1‑150 (MQ=255)
aTAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgt < 2:783113/150‑1 (MQ=255)
aGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgtgt > 1:1515349/1‑150 (MQ=255)
aGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCgtgt > 2:3281773/1‑150 (MQ=255)
cAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTgg > 1:2588234/1‑150 (MQ=255)
acAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTAt > 2:497150/1‑150 (MQ=255)
cAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATg < 2:2703859/150‑1 (MQ=255)
aaCCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGACTTATGa > 2:244624/1‑150 (MQ=255)
aaCCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGa > 2:3390474/1‑150 (MQ=255)
aaCCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGa < 1:2413086/150‑1 (MQ=255)
gCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAg < 2:2872575/150‑1 (MQ=255)
gCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAg < 2:1530654/150‑1 (MQ=255)
ccATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAgg > 1:2809717/1‑150 (MQ=255)
cATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGc < 2:3606157/150‑1 (MQ=255)
tttGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCa < 1:1345128/150‑1 (MQ=255)
attGCGCAGCATGGAAGCCTTTATCAATCACGAACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCATAAACAGGGACGCGTGTGGAATTATGACAAGTCCa < 2:1815581/149‑1 (MQ=255)
ttGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAg < 2:3027433/150‑1 (MQ=255)
tGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGt < 1:1832403/150‑1 (MQ=255)
cgcAGCATGGAAGCCTTTATCAATCTCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTaa < 2:683832/150‑1 (MQ=255)
cgcAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTaa > 2:4043832/1‑150 (MQ=255)
agcaTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGt > 2:1144825/1‑150 (MQ=255)
aTGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTAt > 2:2309128/1‑150 (MQ=255)
ggAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCa < 1:3363256/150‑1 (MQ=255)
ccTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGATACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAcc < 1:3110187/150‑1 (MQ=255)
cTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAccc > 2:1215457/1‑150 (MQ=255)
cTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAAccc < 1:2884145/150‑1 (MQ=255)
tATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCAt < 2:2433498/150‑1 (MQ=255)
atcaatcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCAtt > 1:1408272/1‑150 (MQ=255)
tcaatcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCAttt < 2:789797/150‑1 (MQ=255)
tcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagc < 1:3276730/150‑1 (MQ=255)
tcaCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagc > 1:368858/1‑150 (MQ=255)
caCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagcc > 2:3571839/1‑150 (MQ=255)
aCGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagcca > 2:1396446/1‑150 (MQ=255)
gTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagccagc > 1:1924725/1‑150 (MQ=255)
gTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTcagccagc < 2:1155958/150‑1 (MQ=255)
aCAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCAt < 2:4157873/150‑1 (MQ=255)
cAAGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTg < 1:2479801/150‑1 (MQ=255)
aaGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGa > 1:252016/1‑150 (MQ=255)
aaGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGa > 2:3851788/1‑150 (MQ=255)
aGCCCGTGATGATAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGaa > 1:661089/1‑150 (MQ=255)
gCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAAc < 1:4108169/150‑1 (MQ=255)
cccGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACa > 1:3920555/1‑150 (MQ=255)
gatgatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTAt < 1:1860735/150‑1 (MQ=255)
atgatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATg < 1:3712574/150‑1 (MQ=255)
tgatAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGc < 2:2068190/150‑1 (MQ=255)
gatAGCCGACGCCGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCa > 2:1770750/1‑150 (MQ=255)
ccGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCt < 1:2132032/150‑1 (MQ=255)
gACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGa > 2:3737901/1‑150 (MQ=255)
gACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGa < 2:1191417/150‑1 (MQ=255)
gCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATgg < 2:252884/150‑1 (MQ=255)
ccGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGgc < 2:430625/150‑1 (MQ=255)
ccGATCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAACTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGgc < 1:3553483/150‑1 (MQ=255)
cGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGgcg < 2:1088698/150‑1 (MQ=255)
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CTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAG > CP009273/1371920‑1372218
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
