Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F98 I0 R1
|
799 |
294.1 |
9752082 |
92.2% |
8991419 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
3,324,218 |
G→T |
22.6% |
A299E (GCG→GAG) |
obgE ← |
GTPase involved in cell partioning and DNA repair |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 3,324,218 | 0 | G | T | 22.6%
| 649.7
/ 155.6
| 254 | A299E (GCG→GAG) | obgE | GTPase involved in cell partioning and DNA repair |
| Reads supporting (aligned to +/- strand): ref base G (117/79); new base T (33/25); total (150/104) |
| Fisher's exact test for biased strand distribution p-value = 7.62e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 282 total aligned reads displayed.
TTCTCTGGCTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATCGGTGCCGTCAA > CP009273/3324071‑3324365
|
ttCTCTGGCTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGAtcgct > 1:4537229/1‑150 (MQ=255)
tctcTGGCTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGAtcgctt < 2:2284419/150‑1 (MQ=255)
ctctGGCTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGAtctcttt > 1:4825330/1‑150 (MQ=255)
tgtGGCTGTTTCGATTCTTCTGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCTCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGAtctctttc < 1:1692970/148‑1 (MQ=255)
cTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATctctttcgcttt < 1:2229150/150‑1 (MQ=255)
cTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATcgctttcgcttt < 2:2582587/150‑1 (MQ=255)
cTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATcgctttcgcttt > 1:3583459/1‑150 (MQ=255)
cTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATcgctttcgcttt < 2:4322029/150‑1 (MQ=255)
tGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCGGCGATCgctttcgctttc > 1:901832/1‑150 (MQ=255)
cGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTc < 1:1878808/150‑1 (MQ=255)
cGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTc < 2:1890807/150‑1 (MQ=255)
gCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCg < 2:366798/150‑1 (MQ=255)
ttcttcAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGc > 1:3049176/1‑150 (MQ=255)
ttcAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTc < 2:1943287/150‑1 (MQ=255)
gCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTAt > 1:426591/1‑150 (MQ=255)
cGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCca > 2:4785430/1‑150 (MQ=255)
cGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCca > 2:283096/1‑150 (MQ=255)
gACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCcag < 1:2630619/150‑1 (MQ=255)
ccGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCcagca > 2:751681/1‑150 (MQ=255)
gggTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAga > 2:803345/1‑150 (MQ=255)
gggTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCAAGCAga > 2:3235465/1‑150 (MQ=255)
tttCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAgatcga < 2:3992638/150‑1 (MQ=255)
ttCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAgatcgat < 1:2318959/150‑1 (MQ=255)
tAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGa > 2:4393895/1‑150 (MQ=255)
tAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGa > 1:1327051/1‑150 (MQ=255)
tAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTAACCAGCAGAACGATCTTGTTGa > 1:1189210/1‑150 (MQ=255)
aaaGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGaa > 2:1163462/1‑150 (MQ=255)
aGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAaca < 1:1979733/150‑1 (MQ=255)
tcatcaCATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTa < 1:2608076/150‑1 (MQ=255)
catcaCATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGAACAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTaa > 1:799926/1‑150 (MQ=255)
atcaCATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAAc > 2:2785878/1‑150 (MQ=255)
atcaCATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAAc < 2:3485663/150‑1 (MQ=255)
tcaCATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATATATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAAcc < 2:2374504/150‑1 (MQ=255)
cacaTCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCa < 2:2751719/150‑1 (MQ=255)
caTCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAAc > 1:1020219/1‑150 (MQ=255)
aTCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAAcg > 2:1569976/1‑150 (MQ=255)
aTCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAAcg < 2:4320430/150‑1 (MQ=255)
agcagAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGtt > 2:1484720/1‑150 (MQ=255)
cagAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtc > 2:3115439/1‑150 (MQ=255)
cagAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtc > 1:3164541/1‑150 (MQ=255)
cagAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtc < 2:2005809/150‑1 (MQ=255)
agagATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtcg > 1:217623/1‑150 (MQ=255)
agagATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtcg > 2:3584201/1‑150 (MQ=255)
agagATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtcg > 2:2477463/1‑150 (MQ=255)
gagaTCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtcgt > 2:590660/1‑150 (MQ=255)
agaTCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtcgtc > 2:3022711/1‑150 (MQ=255)
gaTCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTtcgtcg < 2:3901316/150‑1 (MQ=255)
aTCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGc > 1:3416069/1‑150 (MQ=255)
tCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGcc < 2:2625130/150‑1 (MQ=255)
tttCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAg < 2:2398659/150‑1 (MQ=255)
ttCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGa > 1:3966059/1‑150 (MQ=255)
cACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATc > 2:946760/1‑150 (MQ=255)
gCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTg < 2:3099569/150‑1 (MQ=255)
ccAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGc < 1:4135520/150‑1 (MQ=255)
cAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCt > 1:4417071/1‑150 (MQ=255)
tCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTa > 1:2347530/1‑150 (MQ=255)
ccACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTAt > 2:407784/1‑150 (MQ=255)
ccACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTAt > 1:670072/1‑150 (MQ=255)
ccACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACATTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTAt > 2:4328173/1‑150 (MQ=255)
ccACTCGCCGCAGAGATCAGATAATATTTATCGTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTAt < 2:2914939/150‑1 (MQ=255)
aCTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTAttt < 2:4647303/150‑1 (MQ=255)
tCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTAttttt > 2:4711351/1‑150 (MQ=255)
ccgcAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCa > 1:1922612/1‑150 (MQ=255)
cgcAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAg > 2:1698290/1‑150 (MQ=255)
cgcAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAg > 1:3766884/1‑150 (MQ=255)
cAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCt > 2:2205277/1‑150 (MQ=255)
cAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCt > 2:3980984/1‑150 (MQ=255)
cAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCt > 1:4795286/1‑150 (MQ=255)
agaTCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCATATCCAGCAGATCGATCTTGTTGAACACAAACCAACCCGGTTTCGTAGCCAGATCCTGGCTGTATTTTTACAGCTCGc > 1:3672128/1‑150 (MQ=255)
gaTCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCt > 1:4687040/1‑150 (MQ=255)
aTCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTg > 2:3508039/1‑150 (MQ=255)
aTCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTg < 1:3298053/150‑1 (MQ=255)
tCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTATTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTACAGCTAGCTGa > 2:179148/1‑150 (MQ=255)
cAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCGTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGat < 2:130019/150‑1 (MQ=255)
ataataTTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGataat > 2:4822370/1‑150 (MQ=255)
ataataTTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGataat < 2:4280806/150‑1 (MQ=255)
aataTTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGataataa > 1:1196646/1‑150 (MQ=255)
aataTTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGataataa > 2:859776/1‑150 (MQ=255)
atatTTATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGataataat > 1:2688430/1‑150 (MQ=255)
ttATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATACTAcgc > 2:4505237/1‑150 (MQ=255)
tATCTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATAcgcg > 1:3830621/1‑150 (MQ=255)
tCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATAcgcgcg > 1:811182/1‑150 (MQ=255)
cTTCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGt > 1:3256631/1‑150 (MQ=255)
gtCCCAGCCCAGCGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGtt < 2:690341/149‑1 (MQ=255)
ccagcccagcGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAAAACGCGCGTTTTc > 1:2843071/1‑150 (MQ=255)
cagcccagcGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCa < 1:2093758/150‑1 (MQ=255)
agcccagcGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCGGATACTAATACGCGCGTTTTCaa > 1:173142/1‑150 (MQ=255)
agcccagcGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACAAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCaa > 1:4654949/1‑150 (MQ=255)
cccagcGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAAcc > 1:1633829/1‑150 (MQ=255)
ccagcGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCg < 2:4424584/150‑1 (MQ=255)
cagcGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCgg < 2:2155606/150‑1 (MQ=255)
cagcGCCTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCgg < 2:2155478/150‑1 (MQ=255)
gcgcCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGAt > 2:1578973/1‑150 (MQ=255)
cgcCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATc < 2:955238/150‑1 (MQ=255)
cgcCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATc < 2:4591740/150‑1 (MQ=255)
cgcCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATc < 2:1736892/150‑1 (MQ=255)
cTCAGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATCATACGCGCGTTTTCAACCGGATCGGt > 1:4386389/1‑150 (MQ=255)
aGCGATCTCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATCGGTGcc > 1:2169095/1‑150 (MQ=255)
cGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATCGGTGCCGt > 2:4148582/1‑150 (MQ=255)
gATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATCGGTGCCGTc > 1:4054403/1‑150 (MQ=255)
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TTCTCTGGCTGTTTCGCTTCTTCAGCCTGCACGACCGGGTTTTCAATGATAAAGGTCATCACATCCCAGCAGAGATCTTTCACGCCCAGTCCACTCGCCGCAGAGATCAGATAATATTTATCTTCCCAGCCCAGCGCCTCAGCGATCGCTTTCGCTTTCTCTTCGGCTTCTACCTTATCCAGCAGATCGATCTTGTTGAACACTAACCAACGCGGTTTCGTCGCCAGATCCTGGCTGTATTTTTCCAGCTCGCTGATAATAATACGCGCGTTTTCAACCGGATCGGTGCCGTCAA > CP009273/3324071‑3324365
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
