Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
26 |
102.0 |
3326124 |
78.0% |
2594376 |
98.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP002094 |
305,693 |
C→A |
R300I (AGA→ATA) |
LLNZ_01670 ← |
Nisin biosynthesis two‑component system, sensor histidine kinase NisK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP002094 | 305,693 | 0 | C | A | 100.0%
| 330.6
/ NA
| 84 | R300I (AGA→ATA) | LLNZ_01670 | Nisin biosynthesis two‑component system, sensor histidine kinase NisK |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (39/45); total (39/45) |
GTTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTCTCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTTAAACTATTTTTCATTGA > CP002094/305600‑305787
|
gTTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCt < 2:1652853/99‑1 (MQ=255)
tttttttAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCtt > 2:1051266/1‑99 (MQ=255)
tttttttAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCtt > 2:1443820/1‑99 (MQ=255)
ttttttAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCttt > 1:172969/1‑99 (MQ=255)
ttttttAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCttt > 1:286543/1‑99 (MQ=255)
ttttttAACTAGCTGATAATCCACTTGATAAGTTGCTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGTAGATTATCGCttt > 2:1351280/1‑99 (MQ=255)
tttttAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTg < 2:1410529/99‑1 (MQ=255)
tttttAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTg > 1:1636672/1‑99 (MQ=255)
tAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAAt < 2:1225425/99‑1 (MQ=255)
aCTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCa > 2:1063959/1‑99 (MQ=255)
aCTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCa < 2:735097/99‑1 (MQ=255)
aCTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCa < 2:137062/99‑1 (MQ=255)
cTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCAt > 1:782240/1‑99 (MQ=255)
tAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCAtt > 1:592975/1‑99 (MQ=255)
aGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCAttt < 1:1021577/99‑1 (MQ=255)
aGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCAttt < 2:757199/99‑1 (MQ=255)
tAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTtcatca < 2:190075/99‑1 (MQ=255)
tAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTtcatca > 1:975515/1‑99 (MQ=255)
tAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTtcatca < 2:1323983/99‑1 (MQ=255)
aaTCCATTTAATAAGATGTTGACATTATCTACAACAAAACTGATTAATATAACAAAAAATCCTCCAGGTAGATTATCTCTTTGTAATCATTTTcatcat < 2:401092/99‑1 (MQ=255)
aTCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCAtt < 2:256799/99‑1 (MQ=255)
aTCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCAtt < 2:107167/99‑1 (MQ=255)
tCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTc > 1:646655/1‑99 (MQ=255)
ccACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCa > 2:135104/1‑99 (MQ=255)
gcTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCaaa < 2:548024/98‑1 (MQ=255)
aCTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCaaa > 2:165832/1‑99 (MQ=255)
gATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGtt > 1:65360/1‑99 (MQ=255)
gATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGtt < 2:825524/99‑1 (MQ=255)
tAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGtttt > 1:878433/1‑99 (MQ=255)
tAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGtttt < 2:1272240/99‑1 (MQ=255)
aaGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTg > 1:579404/1‑99 (MQ=255)
gttgttGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGta < 1:57553/99‑1 (MQ=255)
ttgttgACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGtat > 2:987422/1‑99 (MQ=255)
ttgACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAAc > 1:216831/1‑99 (MQ=255)
ttgACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAAc < 1:559519/99‑1 (MQ=255)
aCAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTaa < 2:297329/99‑1 (MQ=255)
cAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAAt > 2:591084/1‑99 (MQ=255)
cAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAAt < 1:84964/99‑1 (MQ=255)
aCTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCa > 2:898181/1‑99 (MQ=255)
ctctTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCAt < 1:112746/99‑1 (MQ=255)
ctctTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCAt < 1:899060/99‑1 (MQ=255)
ctTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATtg < 1:1183795/99‑1 (MQ=255)
ctTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATtg > 1:862411/1‑99 (MQ=255)
tCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATtgtg < 1:1285049/99‑1 (MQ=255)
ccAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTgtgt < 2:892621/99‑1 (MQ=255)
actcaactGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTaa < 1:40811/99‑1 (MQ=255)
actGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATAc < 2:728841/99‑1 (MQ=255)
actGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATAc < 1:474374/99‑1 (MQ=255)
actGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATAc > 2:1020416/1‑99 (MQ=255)
actGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATAc > 1:1631383/1‑99 (MQ=255)
actGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATAc > 1:479525/1‑99 (MQ=255)
ctGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTa > 2:299980/1‑92 (MQ=255)
ctGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTa < 1:299980/92‑1 (MQ=255)
ctGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACt < 1:717867/99‑1 (MQ=255)
ctGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACt < 2:115647/99‑1 (MQ=255)
tGATAAAACTATCAAAAAATCCTCCAGGGAGATTAGCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTACAAGACtt < 2:515116/99‑1 (MQ=255)
tAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTc > 2:1625361/1‑99 (MQ=255)
aaTCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCaa > 1:597834/1‑99 (MQ=255)
atcaatcaAAAAATCCTCCAGGGTTATTATCTCTTTGTAATCATTTTCATCATTCAAATGTTTTTTATAACTAATCATTGTTTTAAAATACTTGTCaaa < 2:158886/99‑1 (MQ=255)
tCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCaaaa > 1:951193/1‑99 (MQ=255)
cTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCaaaaa > 2:191035/1‑99 (MQ=255)
aTCAAAAAATCCTCCAGGGAGATTATTGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACa < 1:1400846/99‑1 (MQ=255)
aTCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACa > 2:994104/1‑99 (MQ=255)
tCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAg < 2:1503484/99‑1 (MQ=255)
tCAAAAAAGCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAg < 1:1166429/99‑1 (MQ=255)
cAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGt < 1:211435/99‑1 (MQ=255)
cAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGt < 2:545753/99‑1 (MQ=255)
aaaaaTCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGtca > 2:773023/1‑97 (MQ=255)
aaaaTCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCaa > 2:1488276/1‑99 (MQ=255)
aaaTCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCaaa < 1:1475497/99‑1 (MQ=255)
aaaTCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCaaa < 2:752520/99‑1 (MQ=255)
tcctccAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTa < 1:964498/99‑1 (MQ=255)
tcctccAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTa < 2:1597538/99‑1 (MQ=255)
ctccAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTAtt < 1:577766/99‑1 (MQ=255)
tccAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTAttt < 2:364922/99‑1 (MQ=255)
tccAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTAttt > 1:1274204/1‑99 (MQ=255)
cAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTAttttt > 2:1264443/1‑99 (MQ=255)
gggAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCa > 2:1505725/1‑99 (MQ=255)
gggAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCa > 2:24643/1‑99 (MQ=255)
gagaTTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCAtt > 2:23717/1‑99 (MQ=255)
gagaTTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCAtt > 1:1603222/1‑99 (MQ=255)
gagaTTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCAtt < 2:1251334/99‑1 (MQ=255)
gaTTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCATTGa > 1:154310/1‑99 (MQ=255)
gaTTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCATTGa < 2:1554757/99‑1 (MQ=255)
|
GTTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTCTCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTTAAACTATTTTTCATTGA > CP002094/305600‑305787
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCTGTTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTCTCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTTAAACTATTTTTCATTGA > CP002094/305596‑305787
|
ATCTGTTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATC < SRR7892090.1175788/100‑1 (MQ=60)
TTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTT > SRR7892090.289280/1‑100 (MQ=60)
TTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTT > SRR7892090.174523/1‑100 (MQ=60)
TTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTG > SRR7892090.1647067/1‑100 (MQ=60)
ACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCAT > SRR7892090.788452/1‑100 (MQ=60)
CTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATT > SRR7892090.598241/1‑100 (MQ=60)
AGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTT < SRR7892090.1028773/100‑1 (MQ=60)
ATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCA > SRR7892090.982574/1‑100 (MQ=60)
ccccccttctTAAGTTGTTGACAACGCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTC < SRR7892090.524169/90‑1 (MQ=60)
ATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTC > SRR7892090.652117/1‑100 (MQ=60)
TGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTT > SRR7892090.65938/1‑100 (MQ=60)
tattttttgaacatctctccacaaacaCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTT < SRR7892090.1061432/73‑1 (MQ=60)
ATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTT > SRR7892090.885137/1‑100 (MQ=60)
TAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTG > SRR7892090.584602/1‑100 (MQ=60)
GTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTAT < SRR7892090.58076/100‑1 (MQ=60)
GTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAAC > SRR7892090.218859/1‑100 (MQ=60)
TTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACT < SRR7892090.564580/100‑1 (MQ=60)
cactcttcccaccacaaataaaaAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAAT < SRR7892090.1644420/77‑1 (MQ=60)
CAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATC < SRR7892090.85703/100‑1 (MQ=60)
CTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATT < SRR7892090.113767/100‑1 (MQ=60)
CTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATT < SRR7892090.905845/100‑1 (MQ=60)
TCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTG > SRR7892090.869091/1‑100 (MQ=60)
CTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGT < SRR7892090.1191450/100‑1 (MQ=60)
TCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGT < SRR7892090.1292928/100‑1 (MQ=60)
cgatctACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAA < SRR7892090.302860/94‑1 (MQ=60)
ACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAA < SRR7892090.41203/100‑1 (MQ=60)
aatataaaaaatcctcaaAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAAT < SRR7892090.82297/82‑1 (MQ=60)
AACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATAC > SRR7892090.1641728/1‑100 (MQ=60)
AACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATAC > SRR7892090.483890/1‑100 (MQ=60)
ACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACT < SRR7892090.478717/100‑1 (MQ=60)
CTGATAAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTT < SRR7892090.723884/100‑1 (MQ=60)
AAATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAA > SRR7892090.603117/1‑100 (MQ=60)
ATCTATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAA > SRR7892090.958187/1‑100 (MQ=60)
ATCAAAAAATCCTCCAGGGAGATTATTGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAG < SRR7892090.1408945/100‑1 (MQ=60)
ATCAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATT < SRR7892090.686411/50‑1 (MQ=60)
TCAAAAAAGCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGT < SRR7892090.1174033/100‑1 (MQ=60)
CAAAAAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTC < SRR7892090.213415/100‑1 (MQ=60)
AAATCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAAC < SRR7892090.1484284/100‑1 (MQ=60)
TCCTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTAT < SRR7892090.971532/100‑1 (MQ=60)
CTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTT > SRR7892090.1282061/1‑100 (MQ=60)
CTCCAGGGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTT < SRR7892090.582957/100‑1 (MQ=60)
GGAGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCATT > SRR7892090.1613260/1‑100 (MQ=60)
AGATTATCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTCAAACTATTTTTCATTGA > SRR7892090.155650/1‑100 (MQ=60)
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ATCTGTTTTTTTAACTAGCTGATAATCCACTTGATAAGTTGTTGACAACTCTTCCAACTCAACTGATAAATCTATCAAAAAATCCTCCAGGGAGATTCTCGCTTTGTAATCATTTTCATCATTCAAAAGTTTTGTATAACTAATCATTGTGTTAAAATACTTGTCAAAAACAGTTAAACTATTTTTCATTGA > CP002094/305596‑305787
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
