Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
26 |
102.0 |
3326124 |
78.0% |
2594376 |
98.8 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCAAATATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGCAGAATATTCA > CP002094/698409‑698607
|
ACCAAATATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCC < SRR7892090.82775/100‑1 (MQ=60)
gatactgggtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCT > SRR7892090.320306/40‑100 (MQ=57)
AAATATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGAT > SRR7892090.1295666/1‑100 (MQ=60)
tttcggtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGAT < SRR7892090.1545438/64‑1 (MQ=54)
AATATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATC < SRR7892090.382818/100‑1 (MQ=60)
AATATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATC < SRR7892090.1666531/100‑1 (MQ=60)
AATATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATC > SRR7892090.1244328/1‑100 (MQ=60)
ctgggtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATC < SRR7892090.887053/65‑1 (MQ=53)
ctgggtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATC < SRR7892090.377585/65‑1 (MQ=53)
tgggtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCT < SRR7892090.384232/66‑1 (MQ=55)
cggtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTT > SRR7892090.872189/34‑100 (MQ=58)
ATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTT < SRR7892090.1524874/100‑1 (MQ=60)
AGCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTT < SRR7892090.241676/100‑1 (MQ=60)
ggtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTT < SRR7892090.126325/68‑1 (MQ=60)
gacaattcgggaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTT > SRR7892090.1600370/33‑100 (MQ=60)
TCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTT < SRR7892090.1062465/100‑1 (MQ=60)
TCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTT < SRR7892090.1309577/100‑1 (MQ=60)
gtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTT > SRR7892090.533193/32‑100 (MQ=60)
gtagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTT < SRR7892090.505097/69‑1 (MQ=60)
tagattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTG > SRR7892090.637022/31‑100 (MQ=60)
ATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGT > SRR7892090.1274967/1‑100 (MQ=60)
TAGGCCCCAAAATTGTCTGACCAGTGTTTGGATAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTC < SRR7892090.527135/100‑1 (MQ=60)
gattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTT < SRR7892090.1321893/72‑1 (MQ=60)
gattgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTT < SRR7892090.1476514/72‑1 (MQ=60)
AGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCT > SRR7892090.1485763/1‑100 (MQ=60)
attgtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCT > SRR7892090.457521/28‑100 (MQ=60)
CCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGT > SRR7892090.1077617/1‑100 (MQ=60)
gtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTTTAGT > SRR7892090.75964/25‑100 (MQ=60)
gtaaaattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGT < SRR7892090.331646/76‑1 (MQ=60)
aattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAA > SRR7892090.1094654/21‑100 (MQ=60)
aattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAA > SRR7892090.943335/21‑100 (MQ=60)
aattaatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGCTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAA < SRR7892090.287724/80‑1 (MQ=60)
ATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCT < SRR7892090.530731/100‑1 (MQ=60)
taatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTATAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCT < SRR7892090.247150/83‑1 (MQ=60)
TTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTA < SRR7892090.369321/100‑1 (MQ=60)
taatccgacgctgttcGGACAAAAAAGATCAGCTTCCCTTAAAATGGTGTTTACCATAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTA > SRR7892090.51915/17‑100 (MQ=60)
gagtccgacgctgttcGGACAAAAAAGATCAGCTTCCCTTAAAATGGTGTTTACCATAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTA < SRR7892090.577833/84‑1 (MQ=60)
aatccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTA > SRR7892090.73579/17‑100 (MQ=60)
atccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTGTAACCTAT > SRR7892090.999053/16‑100 (MQ=60)
atccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTAT < SRR7892090.1175252/85‑1 (MQ=60)
atccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTAT < SRR7892090.1640801/85‑1 (MQ=60)
aatccgacgctgttcGGACAAAAAAGATCAGCTTCCCTTAAAATGGTGTTTACCATAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTAT < SRR7892090.1125412/85‑1 (MQ=60)
GTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATT > SRR7892090.1200975/1‑100 (MQ=60)
GTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATT < SRR7892090.756352/100‑1 (MQ=60)
tccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATT > SRR7892090.899713/15‑100 (MQ=60)
TCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTCGTATAACATATTC > SRR7892090.1245433/1‑100 (MQ=60)
TCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTC < SRR7892090.367088/100‑1 (MQ=60)
ccgaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTTTAGTATAACCTATTC < SRR7892090.647349/87‑1 (MQ=60)
ccgacgctgttcGGACAAAAAAGATCAGCTTCCCTTAAAATGGTGTTTACCATAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCT < SRR7892090.1616340/88‑1 (MQ=60)
gaacgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCG > SRR7892090.358825/12‑100 (MQ=60)
acgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAA > SRR7892090.1309007/10‑100 (MQ=60)
CCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAAC < SRR7892090.69312/100‑1 (MQ=60)
cgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTTTAGTATAACCTATTCCGAAC < SRR7892090.1022181/92‑1 (MQ=60)
cgctgttcGGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAAC > SRR7892090.77958/9‑100 (MQ=60)
TGTTTGGACAAAAACGACCAGCTTCCTTTAAAATGGTGTTTATCACATACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAAT < SRR7892090.532727/100‑1 (MQ=60)
TGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAA > SRR7892090.726853/1‑100 (MQ=60)
TGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAA < SRR7892090.1294872/100‑1 (MQ=60)
GGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAA > SRR7892090.489600/1‑100 (MQ=60)
GGACAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTTTAGTATAACCTATTCCGAACGAATTAAA < SRR7892090.1548746/100‑1 (MQ=60)
ACAAAAAATATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAAT < SRR7892090.455991/100‑1 (MQ=60)
ACAAAAAAGATCAGCTTCCTTTAAACTGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAAT < SRR7892090.541819/100‑1 (MQ=60)
ACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATC < SRR7892090.1291099/100‑1 (MQ=60)
CAAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATC < SRR7892090.62188/100‑1 (MQ=60)
CAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCAGATCTTTTGTCTAGTATAACCTATTCTGTACGAATTAAAATCG > SRR7892090.1068496/1‑100 (MQ=60)
AAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGA > SRR7892090.385638/1‑100 (MQ=60)
AAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAG > SRR7892090.152858/1‑100 (MQ=60)
AAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGT < SRR7892090.596434/100‑1 (MQ=60)
AAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaac > SRR7892090.145594/1‑97 (MQ=60)
AAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTT < SRR7892090.1273731/100‑1 (MQ=60)
AAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTT < SRR7892090.1112034/100‑1 (MQ=60)
AGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATtgaaacc > SRR7892090.386770/1‑93 (MQ=60)
AGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaacc < SRR7892090.685955/100‑5 (MQ=60)
GATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATtgaaacct > SRR7892090.505864/1‑92 (MQ=60)
GATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaacct < SRR7892090.1235594/100‑6 (MQ=60)
ATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaacctt > SRR7892090.1510694/1‑94 (MQ=60)
ATCAGCTTCCCTTAAAATGGTGTTTACCATAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAaacctt > SRR7892090.1246943/1‑94 (MQ=60)
ACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTG > SRR7892090.683913/1‑100 (MQ=60)
AGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttg > SRR7892090.79144/1‑91 (MQ=60)
AGCTTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttg > SRR7892090.453948/1‑91 (MQ=60)
GCTTCCCTTAAAATGGTGTTTACCATAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAaaccttttgt < SRR7892090.1298746/100‑11 (MQ=60)
TTCCTTTAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAGTTAAAATCGAaaccttttgtga < SRR7892090.1235685/100‑13 (MQ=60)
CCTTTAAAATGGGGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAG > SRR7892090.77270/1‑100 (MQ=60)
TTAAAATGGTGTTTATCACAACCCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCT < SRR7892090.732272/100‑1 (MQ=60)
TAAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagg < SRR7892090.412947/100‑19 (MQ=60)
AAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAGCGAATTAAAATCGAaaccttttgtgaactaggg > SRR7892090.525071/1‑81 (MQ=60)
AAAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactaggg < SRR7892090.708098/100‑20 (MQ=60)
AAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAG > SRR7892090.171663/1‑100 (MQ=60)
AAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAG > SRR7892090.23240/1‑100 (MQ=60)
AAATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggc < SRR7892090.877495/100‑21 (MQ=60)
AATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGG > SRR7892090.181330/1‑100 (MQ=60)
AATGGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgacctagggct > SRR7892090.289433/1‑79 (MQ=60)
GGTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtc < SRR7892090.338894/100‑25 (MQ=60)
GTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCAT > SRR7892090.278759/1‑100 (MQ=60)
GTGTTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATtgaaaccttttgtgagctaggactgacc < SRR7892090.109216/100‑29 (MQ=60)
GTGTTTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtcc < SRR7892090.1670195/100‑26 (MQ=60)
TTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCAT > SRR7892090.380605/1‑100 (MQ=60)
TTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCAT < SRR7892090.1022644/100‑1 (MQ=60)
TTTACCATAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAaaccttttgtgaactaggcctgtccaat < SRR7892090.30945/100‑29 (MQ=60)
TTTACCACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATtgaaaccttttgtgagctaggactgaccaat < SRR7892090.899262/100‑32 (MQ=60)
TTACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCAAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaaca > SRR7892090.749228/1‑71 (MQ=54)
TATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTC > SRR7892090.1194112/1‑100 (MQ=60)
TACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaatat > SRR7892090.1286410/1‑70 (MQ=60)
ATCACAACCCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCC < SRR7892090.891279/100‑1 (MQ=60)
ATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCC < SRR7892090.1373800/100‑1 (MQ=60)
ATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCC > SRR7892090.1102608/1‑100 (MQ=60)
ACCACAAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaatatc < SRR7892090.1497407/100‑32 (MQ=60)
CACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTtccc > SRR7892090.556186/1‑96 (MQ=60)
ACAAACCCATT‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATtgaaaccttttgtgagctaggactgaccaatatccaa > SRR7892090.1447358/1‑63 (MQ=60)
ACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCC > SRR7892090.1326864/1‑100 (MQ=60)
AAACCCA‑TCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTCTTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaacatccaaat < SRR7892090.1419/100‑37 (MQ=51)
CCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGTGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAA > SRR7892090.510988/1‑100 (MQ=60)
A‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAAT > SRR7892090.1633555/1‑100 (MQ=60)
A‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAAT > SRR7892090.1492632/1‑100 (MQ=60)
C‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAaaccttttgtgaactaggcctgtccaatatccaaatgagcgatc < SRR7892090.609395/100‑45 (MQ=60)
C‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaatatccaaatgggcgttc > SRR7892090.713271/1‑56 (MQ=60)
C‑TTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaacatccaaatgggcgttc < SRR7892090.1597476/100‑45 (MQ=60)
TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGC < SRR7892090.831300/100‑1 (MQ=60)
TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGC < SRR7892090.1638948/100‑1 (MQ=60)
TTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGCAG > SRR7892090.733088/1‑100 (MQ=60)
TAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGCAGA < SRR7892090.1456592/100‑1 (MQ=60)
TAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGCAGA < SRR7892090.735700/100‑1 (MQ=60)
GCTGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAaaccttttgtgaactaggcctgtccaatatccaaatgagcgatcgcctaaaac > SRR7892090.745461/1‑47 (MQ=60)
GCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaatatccaaatgggcgttcggctgaacc < SRR7892090.485666/100‑54 (MQ=60)
GCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaatatccaaatgggcgttcggctgaacc < SRR7892090.1497308/100‑54 (MQ=60)
GCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaacattttgtgaactagggctgtccaatatccaaatgggcgttcggctgaacc > SRR7892090.177148/1‑47 (MQ=60)
CTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAaaccttttgtgaactagggctgtccaatatccaaatgggcgttcggctgaaccg > SRR7892090.550947/1‑46 (MQ=60)
CGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGCAGAATATTCA > SRR7892090.384649/1‑100 (MQ=60)
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ACCAAATATCATAGGCCCCAAAATTGTCTGACCAGTGTTTGGACAAAAAAGACCAGCTTCCTTTAAAATGGTGTTTATCACAAACCCA‑T‑TTTTAGGAGCCGATCTTTTGTCTAGTATAACCTATTCTGAACGAATTAAAATCGAGGTTCTGTTGCAAAGTCTAAGGGCATCATTCCGCCCGATAAATGCAGAATATTCA > CP002094/698409‑698607
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
