Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F21 I1 R7
|
781 |
589.5 |
21734725 |
98.3% |
21365234 |
134.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NZ_CP025268 |
1,218,752 |
T→C |
intergenic (+75/+28) |
CXP41_RS06400 → / ← iraM |
isocitrate/isopropylmalate family dehydrogenase/anti‑adapter protein IraM |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP025268 | 1,218,752 | 0 | T | C | 100.0%
| 210.5
/ NA
| 62 | intergenic (+75/+28) | CXP41_RS06400/iraM | isocitrate/isopropylmalate family dehydrogenase/anti‑adapter protein IraM |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (17/45); total (17/45) |
ATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGTATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTAAACT > NZ_CP025268/1218615‑1218887
|
aTGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACTTGTAATCTCTCCATGTGTTAAATATAGAAACGGGCGTATAACACGCCCGTTGATTTATTGATGTGGATATTAGTAATAGcat > 2:6415420/1‑140 (MQ=37)
ggAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCatat < 1:5278056/140‑1 (MQ=255)
gAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATc < 2:5732767/140‑1 (MQ=255)
aGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGa < 2:7307451/140‑1 (MQ=255)
ggCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAg < 2:4280236/140‑1 (MQ=255)
ggCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAg > 1:8172663/1‑140 (MQ=255)
ggCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAg < 2:8861522/140‑1 (MQ=255)
gcgcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGc < 2:4426574/140‑1 (MQ=255)
gcgcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGc < 1:7265644/140‑1 (MQ=255)
gcgcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGc > 2:9289504/1‑140 (MQ=255)
cgcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCa < 1:10306540/140‑1 (MQ=255)
cgcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCa < 2:5363895/140‑1 (MQ=255)
tAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCatat < 1:8945897/140‑1 (MQ=255)
ctgAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATg < 1:6136466/140‑1 (MQ=255)
ctgAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATg < 1:6675830/140‑1 (MQ=255)
ctgAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATg < 2:4906621/140‑1 (MQ=255)
aaaTGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAg < 2:10252699/140‑1 (MQ=255)
aaaTGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAg < 2:8172662/140‑1 (MQ=255)
aaaTGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAg < 2:4857235/140‑1 (MQ=255)
gTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCa < 2:6310651/140‑1 (MQ=255)
gTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCa < 1:5213006/140‑1 (MQ=255)
gTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCa < 1:3823572/140‑1 (MQ=255)
gTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCa < 1:5153988/140‑1 (MQ=255)
gTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCa < 1:5212703/140‑1 (MQ=255)
gagTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACt < 2:7194503/140‑1 (MQ=255)
gagTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACt < 2:7194517/140‑1 (MQ=255)
ttGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAg < 2:3697977/140‑1 (MQ=255)
ttGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAg < 2:7663457/140‑1 (MQ=255)
ggTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGcc > 1:5174661/1‑140 (MQ=255)
aaGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCata < 2:1634126/140‑1 (MQ=255)
aGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCatat > 2:5803967/1‑140 (MQ=255)
gATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATggg < 1:1809544/140‑1 (MQ=255)
catcGAAAACATGTAATCTCTCCATGTGTTAAATAATGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTAATTGAGCCCATATGGGCat > 1:7970283/1‑140 (MQ=255)
aaCATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTGCTTGAGCCCATATGGGCATATTTTta < 1:2392900/140‑1 (MQ=255)
aCATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTtat < 1:8884372/140‑1 (MQ=255)
tAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGc < 1:4939521/140‑1 (MQ=255)
aTCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCaa < 1:3722907/140‑1 (MQ=255)
tctcCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACta < 1:9289505/140‑1 (MQ=255)
tcCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACtatt > 2:9841448/1‑140 (MQ=255)
tcCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACtatt > 2:6227439/1‑140 (MQ=255)
gtgtTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTa < 1:8885679/140‑1 (MQ=255)
gtTAAATATTGACACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTaaa < 2:6123727/140‑1 (MQ=255)
ttAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAAc > 1:5688443/1‑140 (MQ=255)
tGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACatttattt > 2:9280933/1‑140 (MQ=255)
cGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATATCATATCGAGCATATTTATATGAAGCCAATTACTTGAGCCCATATGGGCAAAATTATATAATGAAAATATTATGTAAACATATATATGTTATTTTg > 1:1126551/1‑140 (MQ=255)
tataACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCt < 1:5634133/140‑1 (MQ=255)
tataACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCt < 1:6746257/140‑1 (MQ=255)
tataACACGACCTTTGTTTTATTTTTGTGGATATTATTTTTTGCATATCGAGCATATTTATATGATGAGCTTTAATTGTGCCAATATTTGCATATTTTTTTAATGGATCTATTATGTTAACATTTATTTGTTTTTTTggt < 2:9601871/140‑3 (MQ=255)
aaCACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTtc < 2:10459284/140‑1 (MQ=255)
cGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCt > 2:556964/1‑140 (MQ=255)
cccGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTgg > 2:8048399/1‑140 (MQ=255)
ccGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATTTAAACATTTATTTGTTATTTTGCTTTCTCCTgga > 2:7221119/1‑140 (MQ=255)
cGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTggag > 2:10307647/1‑140 (MQ=255)
gttgttTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTggagg < 2:3845743/140‑1 (MQ=255)
ttgttTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTggagga > 1:7136672/1‑140 (MQ=255)
ttatGTGGATATTATTAATAGCATATCGAGCATATTTATATGACGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGa < 2:10243219/140‑1 (MQ=255)
tatGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGAc < 2:5179511/140‑1 (MQ=255)
ggATATTATTAATAGCATATCGAGCATATTTCTATGAAGCCCATTACTTGAGCCCATCTGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCtt < 2:6667266/140‑1 (MQ=255)
ggATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCtt < 2:8909245/140‑1 (MQ=255)
attaATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTa < 2:2742878/140‑1 (MQ=255)
aTAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTAAACt > 2:4449394/1‑140 (MQ=255)
tAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCat > 1:7807963/1‑45 (MQ=255)
tAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCat < 2:7807962/45‑1 (MQ=255)
|
ATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGTATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTAAACT > NZ_CP025268/1218615‑1218887
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGTATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTAAACTCCATAAATCCTTGTT > NZ_CP025268/1218602‑1218902
|
CTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGC < SRR14920197.10947825/151‑1 (MQ=60)
TTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCA < SRR14920197.8643733/151‑1 (MQ=60)
ACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCG < SRR14920197.9445236/151‑1 (MQ=60)
ACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCG < SRR14920197.4967792/151‑1 (MQ=60)
GTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAG > SRR14920197.8523595/1‑151 (MQ=60)
TCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGC < SRR14920197.10198904/151‑1 (MQ=60)
TGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCAT < SRR14920197.5744525/151‑1 (MQ=60)
GGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTT < SRR14920197.5507959/151‑1 (MQ=60)
GCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATG < SRR14920197.7579511/151‑1 (MQ=60)
CGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGA < SRR14920197.10745050/151‑1 (MQ=60)
TAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGC < SRR14920197.9328611/151‑1 (MQ=60)
CTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTAC < SRR14920197.6965631/151‑1 (MQ=60)
CTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTAC < SRR14920197.6403874/151‑1 (MQ=60)
ccccccccccccccccccccccccccccccccccccccatttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTG < SRR14920197.9952180/43‑1 (MQ=60)
cccccccccccccccccccccccccccaccgattttcaagcataagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagTTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCC < SRR14920197.8167548/49‑1 (MQ=60)
GTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCC < SRR14920197.3989806/151‑1 (MQ=60)
GTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCC < SRR14920197.5378387/151‑1 (MQ=60)
GTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCC > SRR14920197.5399962/1‑151 (MQ=60)
GTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCC < SRR14920197.5439783/151‑1 (MQ=60)
GTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCC < SRR14920197.5440104/151‑1 (MQ=60)
ccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCAT < SRR14920197.11207454/61‑1 (MQ=60)
cccccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCAT < SRR14920197.9074800/58‑1 (MQ=60)
GGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATAATGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTAATTGAGCCCATATGGGCAT > SRR14920197.8313160/1‑151 (MQ=60)
cccccccccccccctgtttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTAT < SRR14920197.8355565/66‑1 (MQ=60)
GATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTAT < SRR14920197.1888154/151‑1 (MQ=60)
AACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTGCTTGAGCCCATATGGGCATATTTTTATAATGCAACTA < SRR14920197.2497599/151‑1 (MQ=60)
ACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTAT < SRR14920197.9264577/151‑1 (MQ=60)
TAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGT < SRR14920197.5154136/151‑1 (MQ=60)
ATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAA < SRR14920197.3885050/151‑1 (MQ=60)
CTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAAC > SRR14920197.5936429/1‑151 (MQ=60)
TCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACA < SRR14920197.9685892/151‑1 (MQ=60)
GTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTT < SRR14920197.9265937/151‑1 (MQ=60)
ATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATATCATATCGAGCATATTTATATGAAGCCAATTACTTGAGCCCATATGGGCAAAATTATATAATGAAAATATTATGTAAACATATATATGTTATTTTG > SRR14920197.1176317/1‑151 (MQ=60)
TATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAG < SRR14920197.7039068/151‑1 (MQ=60)
TATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAG < SRR14920197.5879808/151‑1 (MQ=60)
TAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGA > SRR14920197.7445459/1‑151 (MQ=60)
GATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggg > SRR14920197.8144181/1‑67 (MQ=60)
ATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaacagggggggggggggggggggggggggggggggggggggg > SRR14920197.7307376/1‑43 (MQ=60)
ATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgacttctgcttgaaaatgggggggtggggggggggggggggggggg > SRR14920197.9438447/1‑51 (MQ=60)
ATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggggggggg > SRR14920197.6702476/1‑59 (MQ=60)
ATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaa > SRR14920197.6097740/1‑82 (MQ=60)
TTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggggggggggggggggggggggggggggggggggg > SRR14920197.614739/1‑42 (MQ=60)
TTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaacgggggggggggggggggggggggggg > SRR14920197.10227678/1‑53 (MQ=60)
TATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaatggggggggggggggggggggggggggggggggggggggg > SRR14920197.947015/1‑41 (MQ=60)
TATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaggggggggggggggg > SRR14920197.5800257/1‑67 (MQ=60)
TATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggg > SRR14920197.5800457/1‑67 (MQ=60)
TATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaagggggggggggggg > SRR14920197.5800014/1‑67 (MQ=60)
ATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggggggggggggggggggggggggggggggggggggg > SRR14920197.5919233/1‑40 (MQ=60)
ATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCtgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggggggggggggggggggggg > SRR14920197.5800006/1‑48 (MQ=60)
ATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCtgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaagggggggggggggggggggggggggggggggggg > SRR14920197.5800134/1‑48 (MQ=60)
ATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggggggggg > SRR14920197.401483/1‑68 (MQ=60)
ATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCtgtctcttatacacatctccgatcccacgagacctctctacatcgcgtatgccgtcttatgctgtaacagggggggggggggggggggggggggggggggggggggg > SRR14920197.8174888/1‑44 (MQ=60)
ATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgtaatgtggggggggggggggggggggg > SRR14920197.1891404/1‑58 (MQ=60)
ATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTAAACTCCATAAATCCT > SRR14920197.362371/1‑151 (MQ=60)
GCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTAAACTCCATAAATCCTTGT > SRR14920197.2410771/1‑151 (MQ=60)
CATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaatgggggg > SRR14920197.1838859/1‑74 (MQ=60)
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CTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGTATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTTGACTGCTTTTGAGTAAACTCCATAAATCCTTGTT > NZ_CP025268/1218602‑1218902
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
