Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
256 |
507.2 |
22121016 |
99.2% |
21944047 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_008463 |
2,707,727 |
N→G |
?75P (CNT→CCT) |
PA14_RS12740 ← |
DUF2285 domain‑containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_008463 | 2,707,727 | 0 | N | G | 99.4%
| 1369.3
/ NA
| 358 | ?75P (CNT→CCT) | PA14_RS12740 | DUF2285 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base N (0/0); major base G (204/152); minor base T (0/2); total (204/154) |
| Fisher's exact test for biased strand distribution p-value = 1.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 362 total aligned reads displayed.
GCAGCAGCCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCANGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTATTCCCAAGCCA > NC_008463/2707579‑2707874
|
gcagcaGCCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAgg > 1:8999476/1‑150 (MQ=255)
gcagcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGaa > 1:1716750/1‑150 (MQ=255)
agcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAccc > 1:7092022/1‑150 (MQ=255)
agcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAAcc < 2:1713292/150‑1 (MQ=255)
gcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCTCGGCTTCGTGGTCAGGGAACCa > 2:5477560/1‑150 (MQ=255)
ccGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAg < 1:7559085/150‑1 (MQ=255)
ccGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAg < 2:370064/150‑1 (MQ=255)
cGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAgg < 1:10724942/150‑1 (MQ=255)
gggCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGc < 1:6125134/150‑1 (MQ=255)
gggCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGc > 1:1419386/1‑150 (MQ=255)
ggCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGcc > 1:791155/1‑150 (MQ=255)
gCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCg > 1:10177258/1‑150 (MQ=255)
ccAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCgg < 2:2435661/150‑1 (MQ=255)
ccAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCgg > 1:4586745/1‑150 (MQ=255)
cAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGa > 1:4183200/1‑150 (MQ=255)
aTGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGACCCAGGCCGGATg > 2:4185727/1‑150 (MQ=255)
aTGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGacg < 1:3801738/150‑3 (MQ=255)
gCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgcg < 2:3396409/150‑1 (MQ=255)
gCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgcg > 2:3268110/1‑150 (MQ=255)
cGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgcgc < 2:2860339/150‑1 (MQ=255)
gACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGcgcg < 2:4747399/150‑1 (MQ=255)
acacCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGt < 1:2407993/150‑1 (MQ=255)
accagcaccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTcg < 1:8315817/150‑1 (MQ=255)
ccagcaccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTcgc < 1:6727247/150‑1 (MQ=255)
caccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGATGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCgcgcgc < 1:5978786/150‑1 (MQ=255)
ccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTNCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCAt < 1:5783046/150‑1 (MQ=255)
ccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCAt > 1:9872460/1‑150 (MQ=255)
ccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCAt < 1:7439282/150‑1 (MQ=255)
agGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCTGGCCGGATGCGCGTCGCGCGCATcc > 1:3582393/1‑150 (MQ=255)
agGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATcc < 2:7034264/150‑1 (MQ=255)
gcgcTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCaa < 2:9785515/150‑1 (MQ=255)
cTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGc > 1:6431523/1‑150 (MQ=255)
ttGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCt > 2:5145809/1‑150 (MQ=255)
ttGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCt > 2:4607545/1‑150 (MQ=255)
ttGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCt > 1:3227805/1‑150 (MQ=255)
tGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCGGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTg < 2:1882151/150‑1 (MQ=255)
gCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTgg > 2:10333014/1‑150 (MQ=255)
gCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTgg < 1:9998910/150‑1 (MQ=255)
gCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTgg > 1:4303199/1‑150 (MQ=255)
cgtcgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTgggg > 2:6590513/1‑149 (MQ=255)
gtcgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTc > 1:10027462/1‑150 (MQ=255)
gtcgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTc > 2:5439/1‑150 (MQ=255)
gtcgtGGATCAGTTGCATGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCTCCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTggggc > 2:2500057/1‑148 (MQ=255)
tcgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCt < 1:6352916/150‑1 (MQ=255)
gtGGATCAGTTGCTTGCGGCCGGGACCGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTc > 1:5530058/1‑150 (MQ=255)
tCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCTTGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCcagca < 1:9804141/150‑1 (MQ=255)
tCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCcagca < 2:5622836/150‑1 (MQ=255)
tCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCcagca > 2:6014531/1‑150 (MQ=255)
tCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCcagca < 2:1615080/150‑1 (MQ=255)
cAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATCGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCcagcag < 1:10941468/150‑1 (MQ=255)
aGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGACCCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcagg > 2:7467747/1‑150 (MQ=255)
aGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcagg > 2:5849832/1‑150 (MQ=255)
gTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggc > 2:2176219/1‑150 (MQ=255)
ttgcttgcGGCCGGGAACGCGCCTGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGAGGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcg < 2:4021017/150‑1 (MQ=255)
ttgcttgcGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcg > 2:6784345/1‑150 (MQ=255)
tgcttgcGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcgc < 2:6384170/150‑1 (MQ=255)
ggctggcGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcgc < 2:3099419/149‑1 (MQ=255)
gcttgcGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcgca < 2:7411301/150‑1 (MQ=255)
ttgcGGCCGGGACCGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcgcagg > 2:7728814/1‑150 (MQ=255)
cGGCCGGGACCGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCACCGTGGTCAGGGAACCTGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTc < 1:4645639/150‑1 (MQ=255)
ggCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGACCCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTcc < 1:3478098/150‑1 (MQ=255)
ggCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTcc > 1:2180857/1‑150 (MQ=255)
ccGGGACCGCGCCAGAACTCGCAGGCATGGGCGTCGGGTGGCGGGTCGGCGTCGGGATAGAGCGGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGCTGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCaa < 2:7817933/150‑1 (MQ=255)
ccGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGTTGGTGCTGCTCCACGGCATGGTGGGCTGGGACCCGGGCCGGATCCGCGTCGCGCGCATCCATGGGGGGGTCTGCCTGCAGGCGCTGGCTCCag > 1:9660023/1‑149 (MQ=255)
ccGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCaa > 1:4512818/1‑150 (MQ=255)
ccGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCaa > 1:10467774/1‑150 (MQ=255)
gggAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGc < 2:1292953/150‑1 (MQ=255)
gaccgcgCCAGAACTCCACGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGCTCAGGGACCGCGGCCGTTTGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCt < 1:5046330/147‑1 (MQ=255)
aCGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTgc > 1:1276672/1‑150 (MQ=255)
cgcgCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTgcg < 2:5689043/150‑1 (MQ=255)
cgcgCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCGGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTgcg < 2:1061436/150‑1 (MQ=255)
cAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCTGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCcgcg > 1:5251339/1‑150 (MQ=255)
aGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGt > 1:4745837/1‑150 (MQ=255)
gAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTc > 1:1880654/1‑150 (MQ=255)
aaCTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGACCCGGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCGAGCCTGCGCCGCGGcc > 2:7932504/1‑150 (MQ=255)
aCTCGAAGGCATGGGCGTCGGGTGGCGGGTCGGCGGCGGGATAGAGCTGCACCACGGCATCGGGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCACGGCTGGGTCTTCCAGCAGGCGCAGGCTCCTAGCCTGCGCCGCGTCCg > 2:8504020/1‑150 (MQ=255)
cTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCgg > 2:8896272/1‑150 (MQ=255)
cTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCgg > 2:8800102/1‑150 (MQ=255)
tCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGAGAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCTAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGc > 2:4374493/1‑150 (MQ=255)
aaGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAg > 2:7821821/1‑150 (MQ=255)
aTGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAgcggcg > 2:4895342/1‑150 (MQ=255)
tGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCa > 1:2918749/1‑150 (MQ=255)
ggCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAg > 2:10990274/1‑150 (MQ=255)
cGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTc > 2:8304959/1‑150 (MQ=255)
gggTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTcg > 1:302210/1‑150 (MQ=255)
ggTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGCTGCGCGTCGCGCGCATCCAAGGCGGGGTCTTCCAGCAGGCGCAGGCTCCAATCCTGCGCCGCGTCCGGCCCGCGGCGACGGCGCCGCCAGTcgc > 2:9100324/1‑150 (MQ=255)
gTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTcgcg > 2:9186128/1‑150 (MQ=255)
gCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGcggcgg > 1:10534330/1‑150 (MQ=255)
cGTCGGCATACAGCTCCCCCCCGCCATCGCGGCCTGCCAACCACGCCGCATGCGCCTCGCGCCCAACCAAGGCTGGGACTTCCCGACGGCGCAGGCGCCACGCCGGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGt < 2:5564971/150‑1 (MQ=255)
cGGGATAGAGCTGCACCACGGCAACGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAAt > 2:3785900/1‑150 (MQ=255)
gggATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATc > 1:8862369/1‑150 (MQ=255)
gCTGCACCACGGCATCGTGGTCTGGTAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCCGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTcc < 2:6230334/150‑1 (MQ=255)
accacGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCAAAGGCTGGGTCTTCCAGAAGGCGCAGGCTCCAAGCATGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCTGTAATCGGGATTCCTgcgc > 2:5124993/1‑150 (MQ=255)
ccacGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCCAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCa > 1:7321618/1‑150 (MQ=255)
cGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGt > 2:9357153/1‑150 (MQ=255)
gCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTAt > 1:8500185/1‑150 (MQ=255)
cATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTAtt > 1:930147/1‑150 (MQ=255)
tCGTGGTCAGGGACCCTGGCCGGATGCGCGTCGGGCGCATCCACGGCTGGGTCTTCCAGCTGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTATTcc < 2:5238811/150‑1 (MQ=255)
gTCAGGGAACCAGGCCGGAGGCGCGTCGCGCGCAGCCAAGGCTGGGTCTTCCCGCCGGCGCCGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTAGTCCCAAGc < 2:10859088/150‑1 (MQ=255)
cAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTATTCCCAAGccc > 1:1536829/1‑149 (MQ=255)
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GCAGCAGCCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCANGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTATTCCCAAGCCA > NC_008463/2707579‑2707874
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
