Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
149 |
26.7 |
2337422 |
87.5% |
2045244 |
105.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
AM260479 |
2,311,480 |
G→A |
intergenic (+15/‑646) |
tRNA‑Leu (CAG) → / → bla1 |
tRNA‑Leu/Beta‑lactamase class C |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | AM260479 | 2,311,480 | 0 | G | A | 100.0%
| 142.9
/ NA
| 38 | intergenic (+15/‑646) | tRNA‑Leu (CAG)/bla1 | tRNA‑Leu/Beta‑lactamase class C |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (21/17); total (21/17) |
GCGCGCTGTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCGAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTTGTGG > AM260479/2311353‑2311608
|
gcgcgcTGTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGc > 1:642701/1‑134 (MQ=255)
gTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCAc > 1:369958/1‑133 (MQ=255)
cTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCtt > 2:480882/1‑134 (MQ=255)
cTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTttttgt < 2:369958/134‑1 (MQ=255)
tGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTttttgttt > 1:1122034/1‑134 (MQ=255)
gCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTttttgtt < 1:480882/132‑1 (MQ=255)
tGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGa < 2:1122034/134‑1 (MQ=255)
gCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACg < 2:642701/134‑1 (MQ=255)
cTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGtcat > 2:479326/1‑113 (MQ=255)
cTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGtcat < 1:479326/113‑1 (MQ=255)
gTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATcc < 1:1146732/113‑1 (MQ=255)
gTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATcc > 2:1146732/1‑113 (MQ=255)
gTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTc > 2:945062/1‑134 (MQ=255)
aaCACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTc > 1:1137976/1‑134 (MQ=255)
acacTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTc > 1:484674/1‑133 (MQ=255)
ggTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTcc > 1:215491/1‑124 (MQ=255)
ggTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTcc < 2:215491/124‑1 (MQ=255)
gTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCtt > 1:1156235/1‑134 (MQ=255)
tCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCtt < 2:876501/127‑1 (MQ=255)
tCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCtt > 1:876501/1‑127 (MQ=255)
ctctCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGc > 2:450326/1‑134 (MQ=255)
cTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGcc < 2:800853/60‑1 (MQ=255)
cTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGcc > 1:800853/1‑60 (MQ=255)
cTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCca < 2:203791/131‑1 (MQ=255)
cTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCca < 1:450326/131‑1 (MQ=255)
gggCACCAAGGTTTCAAGGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCagcagc > 2:188514/1‑134 (MQ=255)
gggCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCagcagc > 1:884285/1‑134 (MQ=255)
gggCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGCTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCagcagc > 1:678731/1‑134 (MQ=255)
aCCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAAt < 1:945062/134‑1 (MQ=255)
ccAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCtt < 2:785711/86‑1 (MQ=255)
ccAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCtt > 1:785711/1‑86 (MQ=255)
gcggcaaaacaaaaAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATac > 2:260383/5‑130 (MQ=255)
gTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATc > 2:1121753/1‑69 (MQ=255)
gTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATc < 1:1121753/69‑1 (MQ=255)
ttCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTgccgc < 2:491313/85‑1 (MQ=255)
ttCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTgccgc > 1:491313/1‑85 (MQ=255)
tCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTtg < 2:678731/133‑1 (MQ=255)
cAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTtgt < 2:1156235/133‑1 (MQ=255)
aaaGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTTGTgg > 1:918122/1‑134 (MQ=255)
|
GCGCGCTGTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCGAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTTGTGG > AM260479/2311353‑2311608
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTGCAAAATCCGCAGCGCGCTGTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCGAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTTGTGGCAAC > AM260479/2311338‑2311612
|
CTTGCAAAATCCGCAGCGCGCTGTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCC > GWNJ‑0478:712:GW2002102894th:2:2104:15868:23354/1‑150 (MQ=60)
AATCCGCAGCGCGCTGTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACG > GWNJ‑0478:712:GW2002102894th:2:1207:7626:40988/1‑149 (MQ=60)
ATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTT > GWNJ‑0478:712:GW2002102894th:2:2214:7662:96897/1‑150 (MQ=60)
TGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACT < GWNJ‑0478:712:GW2002102894th:2:1213:8635:53134/148‑1 (MQ=60)
gagacaGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGC < GWNJ‑0478:712:GW2002102894th:2:1213:7531:45744/144‑1 (MQ=60)
atacgagattagcgagtgtctcgtgggctcggagatgtgtataagagacagCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGC < GWNJ‑0478:712:GW2002102894th:2:2214:18143:95732/99‑1 (MQ=60)
gagacAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCC < GWNJ‑0478:712:GW2002102894th:2:2216:14251:5402/145‑1 (MQ=60)
GGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCC > GWNJ‑0478:712:GW2002102894th:2:2215:4785:67288/1‑150 (MQ=60)
GTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCC > GWNJ‑0478:712:GW2002102894th:2:1213:17682:71683/1‑149 (MQ=60)
TGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTT > GWNJ‑0478:712:GW2002102894th:2:1112:3898:59356/1‑150 (MQ=60)
GGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTC > GWNJ‑0478:712:GW2002102894th:2:2216:10717:46146/1‑150 (MQ=60)
CTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTG > GWNJ‑0478:712:GW2002102894th:2:2201:10610:45584/1‑150 (MQ=60)
GGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCActgtctcttatacacatctccgagcccacgagacactcgctaatctcgtatgccgtcttc > GWNJ‑0478:712:GW2002102894th:2:2112:1443:78874/1‑90 (MQ=60)
TTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCG > GWNJ‑0478:712:GW2002102894th:2:2201:8167:95710/1‑150 (MQ=60)
TTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGCTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCG > GWNJ‑0478:712:GW2002102894th:2:2106:19355:32350/1‑150 (MQ=60)
GTCCTCTCCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCtgtctcttatacacatctccgagcccacgagac > GWNJ‑0478:712:GW2002102894th:2:2112:11063:2828/1‑117 (MQ=60)
CCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCtgtctcttatacacatctccgagcccacgagac > GWNJ‑0478:712:GW2002102894th:2:1212:16484:3806/1‑116 (MQ=60)
CCTGGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGT < GWNJ‑0478:712:GW2002102894th:2:1211:20012:94219/147‑1 (MQ=60)
GGGCACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTTGTGGC > GWNJ‑0478:712:GW2002102894th:2:2204:7868:5159/1‑150 (MQ=60)
CACCAAGGTTTCAAAGCAAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTTGTGGCAAC < GWNJ‑0478:712:GW2002102894th:2:2205:5676:66569/150‑1 (MQ=60)
|
CTTGCAAAATCCGCAGCGCGCTGTAAAATCCGGCGCTCACCTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTGTGGAGGTTCGAGTCCTCTCCTGGGCACCAAGGTTTCAAAGCGAAAAGCCCGCACGAACGTGCGGGCTTTTTGTTTTGCCGCGACGGACTCGTCATTCATCCGCGCACAGCTTTGCCGCCGTCTGGTCCAGCTGCGCCTTCACCATTGCCAGCAGCGAATACACGTTGTGGCAAC > AM260479/2311338‑2311612
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
