Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
149 |
26.7 |
2337422 |
87.5% |
2045244 |
105.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
AM260480 |
293,407 |
T→A |
Y759N (TAC→AAC) |
flhF → |
Flagellar GTP‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | AM260480 | 293,407 | 0 | T | A | 100.0%
| 142.7
/ NA
| 38 | Y759N (TAC→AAC) | flhF | Flagellar GTP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (21/17); total (21/17) |
GCGGCCGCGCCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAATACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATCGC > AM260480/293284‑293533
|
gcgGCCGCGCCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCggg > 2:283168/1‑134 (MQ=255)
gcgcCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTa > 2:651548/1‑84 (MQ=255)
gcgcCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTa < 1:651548/84‑1 (MQ=255)
ccggtgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCgg > 1:1004817/1‑76 (MQ=255)
ccggtgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCgg < 2:1004817/76‑1 (MQ=255)
ccggtgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGc > 1:414033/1‑133 (MQ=255)
ggtgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAg < 2:949867/101‑1 (MQ=255)
ggtgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAg > 1:949867/1‑101 (MQ=255)
ggtgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCAt > 1:677633/1‑134 (MQ=255)
ggtgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCAt < 1:697431/134‑1 (MQ=255)
tgccggGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATgg < 1:283168/134‑1 (MQ=255)
aTGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGc > 1:192666/1‑68 (MQ=255)
aTGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGc < 2:192666/68‑1 (MQ=255)
aTGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATg > 1:653670/1‑134 (MQ=255)
aTGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATg > 2:1032336/1‑134 (MQ=255)
gggCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGcc < 2:675483/121‑1 (MQ=255)
gggCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGcc > 1:675483/1‑121 (MQ=255)
gCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCAccg < 2:28981/51‑1 (MQ=255)
gCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCAccg > 1:28981/1‑51 (MQ=255)
gCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGgcgc > 1:536451/1‑134 (MQ=255)
cTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAgcg > 1:658604/1‑84 (MQ=255)
cTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAgcg < 2:658604/84‑1 (MQ=255)
cTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAgc > 1:305034/1‑83 (MQ=255)
cTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAgc < 2:305034/83‑1 (MQ=255)
cTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCcgcg > 1:799554/1‑133 (MQ=255)
gCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCac < 2:677633/133‑1 (MQ=255)
gCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCac < 2:536451/133‑1 (MQ=255)
cATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCacga < 2:799554/134‑1 (MQ=255)
aTTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCacgac > 2:505641/1‑134 (MQ=255)
ttGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCacgacg > 1:742676/1‑134 (MQ=255)
aCGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAg < 1:478375/65‑1 (MQ=255)
aCGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAg > 2:478375/1‑65 (MQ=255)
gTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATc < 2:603159/134‑1 (MQ=255)
gCTGGAAAACTATCCGGGACGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATCGc > 2:709562/1‑134 (MQ=255)
cTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCg > 1:823919/1‑45 (MQ=255)
cTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCg < 2:823919/45‑1 (MQ=255)
cTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGAt < 2:323662/47‑1 (MQ=255)
cTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGAt > 1:323662/1‑47 (MQ=255)
|
GCGGCCGCGCCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAATACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATCGC > AM260480/293284‑293533
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGCGCCTGGAACACGCGCCGACCGCGGCCGCGCCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAATACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATCGCCG > AM260480/293260‑293535
|
aagagacaGGAACACGCGCCGACCGCGGCCGCGCCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAAC < GWNJ‑0478:712:GW2002102894th:2:1102:15835:11095/142‑1 (MQ=60)
tcaagcagaagacggcatacgagattagcgagtgtctcgtgggctcggagatgtgtataagagacagGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAAC < GWNJ‑0478:712:GW2002102894th:2:1114:8836:51753/82‑1 (MQ=60)
gtgtctcgtgggctcggagatgtgtataagagacagGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCAC < GWNJ‑0478:712:GW2002102894th:2:2104:20040:77019/114‑1 (MQ=60)
GACCGCGGCCGCGCCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCtgtctcttat > GWNJ‑0478:712:GW2002102894th:2:1110:3700:16857/1‑139 (MQ=60)
cggcatacgagattagcgagtgtctcgtgggctcggagatgtgtataagagacagTGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCA < GWNJ‑0478:712:GW2002102894th:2:1213:1874:41151/95‑1 (MQ=60)
GTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGctgtctcttatacacatctccgagcccacgagacactcgctaat > GWNJ‑0478:712:GW2002102894th:2:2208:2633:5070/1‑106 (MQ=60)
GTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCC > GWNJ‑0478:712:GW2002102894th:2:1208:2694:96968/1‑149 (MQ=60)
GCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCctgtctcttatacacatct > GWNJ‑0478:712:GW2002102894th:2:2205:13839:94894/1‑131 (MQ=60)
GCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATG > GWNJ‑0478:712:GW2002102894th:2:2106:15327:25981/1‑150 (MQ=60)
aagacggcatacgagattagcgagtgtctcgtgggctcggagatgtgtataagagacaGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAG < GWNJ‑0478:712:GW2002102894th:2:2207:13896:5447/92‑1 (MQ=60)
CGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAG < GWNJ‑0478:712:GW2002102894th:2:2108:8053:43893/150‑1 (MQ=60)
GTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCC < GWNJ‑0478:712:GW2002102894th:2:1116:19867:94962/150‑1 (MQ=60)
GTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTctgtctcttatacacatctccgagcccacgagacactcgctaatctcgtatg > GWNJ‑0478:712:GW2002102894th:2:1113:12581:40142/1‑98 (MQ=60)
GTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGC > GWNJ‑0478:712:GW2002102894th:2:2104:6384:89563/1‑150 (MQ=60)
GCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTG > GWNJ‑0478:712:GW2002102894th:2:2106:13517:13863/1‑150 (MQ=60)
CAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCtgtctcttatacacatctccgagcccacgagacactcgctaacctcgtatgccgtcttctgcttgaaaaaaaaaaatcgttcatctccagc > GWNJ‑0478:712:GW2002102894th:2:2211:20708:13215/1‑59 (MQ=60)
ATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCtgtctcttatacacatctccgagcccacgagacactcgctaatctcgtatgccgtcttctgcttgaa > GWNJ‑0478:712:GW2002102894th:2:1103:6349:86607/1‑82 (MQ=60)
ATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCC > GWNJ‑0478:712:GW2002102894th:2:1214:4458:19972/1‑150 (MQ=60)
GGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCtgtctcttatacacatctccgagcccacgagacact > GWNJ‑0478:712:GW2002102894th:2:1203:9412:34443/1‑114 (MQ=60)
GGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCctgtctcttatacacatctccgagcccacgagacac > GWNJ‑0478:712:GW2002102894th:2:2107:17428:18942/1‑114 (MQ=60)
GGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGC > GWNJ‑0478:712:GW2002102894th:2:2112:9154:72312/1‑149 (MQ=60)
GGCCGCATGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGC > GWNJ‑0478:712:GW2002102894th:2:2111:17058:84063/1‑150 (MQ=60)
TGCTGGCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCctgtctcttatacacatctccgagcccacgagacactcgctaatctcgtatgccgtcttctgcttgaaaaaaaaaaaaaaacaaa > GWNJ‑0478:712:GW2002102894th:2:1216:9861:29671/1‑64 (MQ=60)
gtgtataagagacaGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATCGCCG < GWNJ‑0478:712:GW2002102894th:2:2203:5352:27985/136‑1 (MQ=60)
GCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGctgtctcttatacacatctccgagcccacgagacactcgctaatctcgtatgccgtcttctgcttgaaaaaaaa > GWNJ‑0478:712:GW2002102894th:2:2115:5611:86496/1‑75 (MQ=60)
GCATTGCTCGACGTGCTGGAAAACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGctgtctcttatacacatctccgagcccacgagacactcgctaatctcgtatgccgtcttctgcttgaaaaaa > GWNJ‑0478:712:GW2002102894th:2:1202:11921:54113/1‑77 (MQ=60)
|
CTGCGCCTGGAACACGCGCCGACCGCGGCCGCGCCCGCCTTCCTCGCGCGCCTGGCTGGCCGCACGGTGCGCCAGGGCGTGCCGGTGCCGGGCACGGTGCTCAATGAAGGCATGGGCCGCATGCTGGCATTGCTCGACGTGCTGGAATACTATCCGGGCCGCGGCACCGCCGTGCCCGCTGAAGCGATGGAGGTGTTGCAGTGAGCGCCCTCGCCATGGACCAGGCCGAGAGCCTGCGCCGGATGCTGGCGCCGCGCACGACGCGCCGTATCGCCG > AM260480/293260‑293535
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
