Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACACTCTTACTATCCAAACAACAAAGAAGAATCAATCTCCACAAAACTTCAAGGTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAAGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTCAACTATTGTTTATAAAGAGATCCATTTGAGTCTACAGATTTTTCTATTTATCAAACTATAATATTCCACCACTCT  >  BK006934/352859‑353455
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                          
ACACTCTTACTATCCAAACAACAAAGAAGAATCAATCTCCACAAAACTTCAAGGTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGA                                                                                                                                                                                                                                                                                                          <  SRR13385771.1299147/301‑1 (MQ=60)
  ACTCTTACTAACCAAACAACAAAGAAGAATCAATCTCCACAAAACTTCAAGGTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAATCCTCATATGTCAACGCGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGAC                                                                                                                                                                                                                                                                                                         >  SRR13385771.844990/1‑300 (MQ=60)
     CTTACTAGCCAAACAACAAAGAAGAATCAATCGCCACAAAACTTCAAGGGGAGAAAATGTACATTCATCAAGCAGTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACAT                                                                                                                                                                                                                                                                                                       <  SRR13385771.596117/299‑1 (MQ=60)
       TACTATCCAAACAACAAAGAAGAATCAATCGCCACAAAACTTCAAGGTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCA                                                                                                                                                                                                                                                                                                     <  SRR13385771.884660/299‑1 (MQ=60)
                                       CACAAAACTTCAAGGTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATA                                                                                                                                                                                                                                                                   <  SRR13385771.1428677/301‑1 (MQ=60)
                                             ACTTCAAGGTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGT                                                                                                                                                                                                                                                             <  SRR13385771.927022/301‑1 (MQ=60)
                                                     GTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATA                                                                                                                                                                                                                                                     <  SRR13385771.1325490/301‑1 (MQ=60)
                                                                                  GGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCA                                                                                                                                                                                                                         <  SRR13385771.182800/300‑1 (MQ=60)
                                                                                             GTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATT                                                                                                                                                                                                             >  SRR13385771.1658435/1‑301 (MQ=60)
                                                                                                ATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAAT                                                                                                                                                                                                          <  SRR13385771.998876/301‑1 (MQ=60)
                                                                                                  AAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGTGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTGTCGATCAAATCTGCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGTTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATT                                                                                                                                                                                                         <  SRR13385771.481404/300‑1 (MQ=60)
                                                                                                      CCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAA                                                                                                                                                                                                     >  SRR13385771.1697961/1‑300 (MQ=60)
                                                                                                             TAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATTCTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGT                                                                                                                                                                                              <  SRR13385771.197665/300‑1 (MQ=60)
                                                                                                                                CAAATCAAACCCTAATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTCAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGC                                                                                                                                                                          >  SRR13385771.702981/1‑301 (MQ=60)
                                                                                                                                 AAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATATAACAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATATTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGCAGATATCAAAGTGCTACATGAGGGAAGTAGCCAATCCATTACATTAATTCAAAGAATAGTGGACAGAAGCTGGGAGCAGCT                                                                                                                                                                         >  SRR13385771.1634339/1‑301 (MQ=60)
                                                                                                                                      AAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAAC                                                                                                                                                                    >  SRR13385771.1664770/1‑301 (MQ=60)
                                                                                                                                          CCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACA                                                                                                                                                                   >  SRR13385771.911236/1‑298 (MQ=60)
                                                                                                                                           CTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGCCGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGC                                                                                                                                                                >  SRR13385771.1635007/1‑300 (MQ=60)
                                                                                                                                             CATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACG                                                                                                                                                              >  SRR13385771.86585/1‑300 (MQ=60)
                                                                                                                                                       CGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAA                                                                                                                                                   <  SRR13385771.258912/301‑1 (MQ=60)
                                                                                                                                                          GGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGT                                                                                                                                                >  SRR13385771.221241/1‑301 (MQ=60)
                                                                                                                                                                                   GAAAGTGTAATAGCATCTAAAAAGACAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGACGGCAGGAACGGTGGATAGATTAATTAATGACGGAACC                                                                                                                       >  SRR13385771.319246/1‑301 (MQ=60)
                                                                                                                                                                                           AATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATAT                                                                                                               <  SRR13385771.864454/301‑1 (MQ=60)
                                                                                                                                                                                           AATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGCGGATAGATTAATTAATGACGGAAACGATAATA                                                                                                                >  SRR13385771.794813/1‑300 (MQ=60)
                                                                                                                                                                                                      AAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATAT                                                                                                    >  SRR13385771.1558363/1‑301 (MQ=60)
                                                                                                                                                                                                              GAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCAG                                                                                            <  SRR13385771.795470/301‑1 (MQ=60)
                                                                                                                                                                                                                       GGGGGCAAGGGTGTGAGTGCAGATGGTCAGTTCATTTTCGATCAAATCTTCAATACCATAGTATATACTATGTGGGTGGCTAAGTACATCATTATTCTTGATGACTGTAAGGTGCAACCTCCATACGAGGTCGAAGATATCAAAGTGCTACATGATGGAAGTAACCAATCCATTACATTAATTCAAAGAATATTGGAAAGAATCTGGTAGCATCTAGAACAAGACGATGGGAGGAAATGTTTATATATTAATTAATGACGGAAACTATAATATACGTTATATATTTTATCCGGACTTCTAT                                                                                   <  SRR13385771.1163815/301‑1 (MQ=60)
                                                                                                                                                                                                                             AAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTC                                                                             >  SRR13385771.1060676/1‑301 (MQ=60)
                                                                                                                                                                                                                                   GTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTCAACTAT                                                                       <  SRR13385771.939150/301‑1 (MQ=60)
                                                                                                                                                                                                                                           ATAGGGTCAGGTCATTTTCGATTAAATCTTCAAGACCATAGGAGATGCTAAGTGGGTGGCTAAGGACAGTATTATTCTTGATGACGTTAAGGTGCAAACTTCATACAAGGTCGAAGATATCAATGTGCTACATGGGGGAAGTATCCAATCCATTATATGAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGTCGGAAACGATAATATACGTTATATATTTGATCCGGACTTCTATAATGTCAACTATTGTTTAT                                                                <  SRR13385771.281958/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                        TCAAGACCATAGGAGATACTAAGTTGGTGGCTAAGGACATCATTATTCTTGATGACGTGAATGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAATACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACTTTATATATTTTATCCGTACTTCTATAATGTCAACTATTGTTTATAAAGAGATCCATTTGAGTCTACAGATTTT                                   <  SRR13385771.1396448/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                               CATAGGAGATACTAAGTGGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGCGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTCAACTATTGTTTATCACGAGATCCATTTGAGTCTACAGATTTTTCTATTTT                           >  SRR13385771.1641962/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                GGGTGGCTAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTCAACTATTGTTTATAAAGAGATCCATTTGAGTCTACAGATTTTTCTATTTATCAAACTATAATATTCC          >  SRR13385771.400199/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                       TAAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTCAACTATTGTTTATAAAGAGATCCATTTGAGTCTACAGATTTTTCTATTTATCAAACTATAATATTCCACCACTC   >  SRR13385771.1524150/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                        AAGGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGCACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTCAACTATTGTTTATAAAGAGATCCATTTGAGTCTACAGATTTTTCTATTTATCAAACTATAATATTCCACCACTCT  >  SRR13385771.1427745/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                          
ACACTCTTACTATCCAAACAACAAAGAAGAATCAATCTCCACAAAACTTCAAGGTGATAAAATGTACATTCATCAAGCATTTGGAAGTCATTGGTGATAAGCCCTCGTTTAACTCATTCAAAAAGCAACAAATCAAACCCTCATATGTCAACGTGGAAAGAGTTGAGAAGCTTTTGAAAGAAAGTGTAATAGCATCTAAAAAGAAAGAACTCTTAAGGGGCAAGGGTGTGAGTGCAGAGGGTCAGTTCATTTTCGATCAAATCTTCAAGACCATAGGAGATACTAAGTGGGTGGCTAAAGACATCATTATTCTTGATGACGTTAAGGTGCAACCTCCATACAAGGTCGAAGATATCAAAGTGCTACATGAGGGAAGTAACCAATCCATTACATTAATTCAAAGAATAGTGGAAAGAAGCTGGGAGCAGCTAGAACAAGACGATGGTAGGAAAGGTGGATAGATTAATTAATGACGGAAACGATAATATACGTTATATATTTTATCCGTACTTCTATAATGTCAACTATTGTTTATAAAGAGATCCATTTGAGTCTACAGATTTTTCTATTTATCAAACTATAATATTCCACCACTCT  >  BK006934/352859‑353455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑