Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGTCCATTGGCTGCCTTTAAAGTGCAGAAGTCAGAAGCATTGTTACTAACTTTCAACAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTCCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACCATACACACACATTATACTTAAGTGAGTTTTCTGGACCCGTGGAAGGCATCCTGATTGTTTGCGTTT  >  BK006934/354875‑355461
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                              
CGTCCATTGGCTGCCTTTAAAGTGCAGAAGTCAGAAGCATTGTTACTAACTTTCAACAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTT                                                                                                                                                                                                                                                                                                <  SRR13385771.1748740/301‑1 (MQ=60)
                           AAGTCAGAAGCATTGTTACTAACTTTCAACAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAAAATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGAATGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGAT                                                                                                                                                                                                                                                                     >  SRR13385771.1677884/1‑301 (MQ=60)
                             GTCAGAAGCATTGTTACTAACTTTCAACAAGTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATGTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATAGCAAACGTTCGATGGATGTGATGG                                                                                                                                                                                                                                                                   <  SRR13385771.1078308/301‑1 (MQ=60)
                                  AAGCATTGTTACTAACTTTCAACAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAACCGTTCGATGGATGTGATGGTGTA                                                                                                                                                                                                                                                               >  SRR13385771.330008/1‑300 (MQ=60)
                                      ATTGTTACTAACTTTCAACAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGTAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGC                                                                                                                                                                                                                                                          >  SRR13385771.1046396/1‑301 (MQ=60)
                                        TGTTACTAACTTTCAACAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCT                                                                                                                                                                                                                                                         <  SRR13385771.149744/300‑1 (MQ=60)
                                                        CAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCAATTTTGGCAAAGATTTTGTCACATATTTACCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTAGATGGATGTGATGGTGACCACGCTCGACGTATCACTCAATC                                                                                                                                                                                                                                        >  SRR13385771.1647356/1‑301 (MQ=60)
                                                                          ATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACT                                                                                                                                                                                                                      <  SRR13385771.347859/301‑1 (MQ=60)
                                                                                    TCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAACCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCAT                                                                                                                                                                                                            >  SRR13385771.1655586/1‑301 (MQ=60)
                                                                                      AAAGGGAAGACCGCGCGCTGGTATCTAAGTATTTCTTAAAGCCATGTTGGCAAAGATTTTGTCACATATGTCCCACGTGGATGTCGCCCAACATCATCACATTAGCAGTATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTAGTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTATGAGAACTAT                                                                                                                                                                                                                    <  SRR13385771.1258382/291‑1 (MQ=60)
                                                                                       AAGTGAAGACCGCGCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGTATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGAGACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATA                                                                                                                                                                                                           <  SRR13385771.1682973/299‑1 (MQ=60)
                                                                                         GTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGCATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGCCTGTATTATATTACGATCCAAACCTTAACACAGATACGCCTCGATGGACATATTTTTCTTACGCATTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTAGCCGTATCAATCAATCAGGACCATTAGAAGAACTATTCGATAATAGTAT                                                                                                                                                                                                       >  SRR13385771.376803/1‑301 (MQ=60)
                                                                                             AGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATGTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGAGTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCCTTAGGTGTATTTCTATATCAAACGTTCGATGGCTGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGATAACTATTCGAACATAGGTTTGAT                                                                                                                                                                                                   >  SRR13385771.366139/1‑301 (MQ=60)
                                                                                                  GCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCAT                                                                                                                                                                                              >  SRR13385771.1206700/1‑301 (MQ=60)
                                                                                                   CTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGTCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATT                                                                                                                                                                                             >  SRR13385771.286432/1‑301 (MQ=60)
                                                                                                                          TAACGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGCTACGCCTAGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTAGATCATAGTCTTGATGCCATTAATTCTACTCTGTCTATTTTCAT                                                                                                                                                                      >  SRR13385771.1140444/1‑301 (MQ=60)
                                                                                                                                                                   TGGATGGCGCCCAACATCATCACATGATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCGTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTGCGATGGATGTGAGGGTGGACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATTCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTT                                                                                                                               <  SRR13385771.1629571/299‑1 (MQ=60)
                                                                                                                                                                      ATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCACTCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGT                                                                                                                          >  SRR13385771.1753426/1‑301 (MQ=60)
                                                                                                                                                                                ACATCATCACATTATCAGGTTTTGCTGTTATAGTTATCAACGTGTTGTCTGTATTCTATTACGATCCAAACCTTAGCACAGATACGCCTCGCTGGACTTATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCTTATAACTTAATGTTATCCCAATT                                                                                                                <  SRR13385771.120591/301‑1 (MQ=60)
                                                                                                                                                                                      TCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGAT                                                                                                          >  SRR13385771.578408/1‑301 (MQ=60)
                                                                                                                                                                                                                   ATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCCTAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGCCGAATTTTTACTTAAGTACTTTGG                                                                             >  SRR13385771.302713/1‑301 (MQ=60)
                                                                                                                                                                                                                       ACGTGTTGACTGTGTGCTATTACGATCCAAACCTTATCACAGATACGCCTCGCTGGACATATTTTTCTTACTCTTTAGGTGTATGTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGA                                                                         <  SRR13385771.1509447/301‑1 (MQ=60)
                                                                                                                                                                                                                       ACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGTAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGA                                                                         <  SRR13385771.1742512/301‑1 (MQ=60)
                                                                                                                                                                                                                        CGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATACCTTAATGTTATCCCAATTTGCGATGCTGACGACTTTTTACTTACGTCCTTGGGAAG                                                                          >  SRR13385771.108731/1‑299 (MQ=60)
                                                                                                                                                                                                                             TGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACC                                                                    <  SRR13385771.573615/300‑1 (MQ=60)
                                                                                                                                                                                                                              GACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTAGATCATAGTATTGATGCC                                                                                                                                                                                                <  SRR13385771.716663/175‑1 (MQ=60)
                                                                                                                                                                                                                                  GTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACCATACA                                                               <  SRR13385771.670432/300‑1 (MQ=60)
                                                                                                                                                                                                                                                     ACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTTCGATATCAGACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCGTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCGATTTTCATCTTCGCATCCGGAACTGGAATGGGATCTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACCATACACACACATTATACGTAAGTGA                                           <  SRR13385771.1044348/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                 ATATTTTTCTTACGCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACACTACACACACATTATACTTACGTCAGCTTTCTGGAACCGTGGACGGCATCCTG               >  SRR13385771.1031751/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                              GCTTTAGGTGTATTTCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACCATACACACACATTATACTTAAGTGAGTTTTCTGGACCCGTGGAAGGCATCCTGATTGTTTGCGTTT  >  SRR13385771.535948/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                           TTCTATATCAAACGTTCGATGGATGTGATGGTTTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACCATACACACACATTATA                                                    <  SRR13385771.265415/238‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                              
CGTCCATTGGCTGCCTTTAAAGTGCAGAAGTCAGAAGCATTGTTACTAACTTTCAACAATTTTTATTCCTTTTCATGATAGATATCAAAGTGAAGACCGCTCGCTGGTATCGAAGTATTTCTTAAAGCCATTTTGGCAAAGATTTTGTCACATATTTCCCACGTGGATGGCGCCCAACATCATCACATTATCAGGATTTGCTTTTATAGTTATCAACGTGTTGACTGTATTCTATTACGATCCAAACCTTAACACAGATACGCCTCGCTGGACATATTTTTCTTACGCTTTAGGTGTATTCCTATATCAAACGTTCGATGGATGTGATGGTGTACACGCTCGCCGTATCAATCAATCAGGACCCTTAGGAGAACTATTCGATCATAGTATTGATGCCATTAATTCTACTCTGTCTATTTTCATCTTCGCATCCGAAACTGGAATGGGATTTTCGTATAACTTAATGTTATCCCAATTTGCGATGCTGACGAATTTTTACTTAAGTACTTGGGAAGAGTACCATACACACACATTATACTTAAGTGAGTTTTCTGGACCCGTGGAAGGCATCCTGATTGTTTGCGTTT  >  BK006934/354875‑355461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑