Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGTATATACGGAAAACAGGTAATCTGGCATACCTACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGCAAATTGAGCAAGATAGTGCTATAAAAGGTCTTTTGCCCTTTTTTGCCTATTATGCAAGCATTGCTTTACTAGTGTGGATGCAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCT  >  BK006934/355476‑356051
                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                            
GGTATATACGGAAAACAGGTAATCTGGCCTACCTACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTT                                                                                                                                                                                                                                                                                     <  SRR13385771.685054/301‑1 (MQ=60)
   ATATACGGAAAACAGGTAATCTGGCATACCTACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTC                                                                                                                                                                                                                                                                                   >  SRR13385771.1107079/1‑300 (MQ=60)
     ATACGGAAAACAGGTAATCTGGCATACCTACTTATTTACAATTACAGTTGGTGCTAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGCTAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAACATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATC                                                                                                                                                                                                                                                                                >  SRR13385771.1816390/1‑301 (MQ=60)
          GAAAACAGGTAATCTGGCATACCTACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACATCCAAGCTTTACTACACTCTCTTTCATCCTTTC                                                                                                                                                                                                                                                                           >  SRR13385771.923161/1‑301 (MQ=60)
                   TAATCTGGCATACCTACTTATTTACAAGTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGAGAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCGGTATTACACTCTCTTTCATCCTTTCCGTTGGTT                                                                                                                                                                                                                                                                   <  SRR13385771.1404541/300‑1 (MQ=60)
                    AATCTGGCATACCTACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTC                                                                                                                                                                                                                                                                 >  SRR13385771.693806/1‑301 (MQ=60)
                         GGCATACCTACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCAC                                                                                                                                                                                                                                                               <  SRR13385771.1159913/298‑1 (MQ=60)
                                 TACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTT                                                                                                                                                                                                                                                     >  SRR13385771.23645/1‑300 (MQ=60)
                                  ACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTT                                                                                                                                                                                                                                                     <  SRR13385771.939031/299‑1 (MQ=60)
                                                   GTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCG                                                                                                                                                                                                                                  <  SRR13385771.1054935/301‑1 (MQ=60)
                                                                 AATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACT                                                                                                                                                                                                                    >  SRR13385771.980071/1‑301 (MQ=60)
                                                                  ATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACT                                                                                                                                                                                                                    >  SRR13385771.568776/1‑300 (MQ=60)
                                                                    TGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGCATAATCGTTTGCCATTTAACTA                                                                                                                                                                                                                   >  SRR13385771.1317010/1‑299 (MQ=60)
                                                                           GACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCT                                                                                                                                                                                                          <  SRR13385771.21047/301‑1 (MQ=60)
                                                                            ACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCGTTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTT                                                                                                                                                                                                         <  SRR13385771.814764/301‑1 (MQ=60)
                                                                              ACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCCCGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGACGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTC                                                                                                                                                                                                       >  SRR13385771.494668/1‑301 (MQ=60)
                                                                                TCTAGATATTGTTTTTTCCCTAGCTGCTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCACGATAGTGCTATAAAAGGTCTGTTGCCC‑TTTTTGCCTCTTATCCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCCGACGACTAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCC                                                                                                                                                                                                     >  SRR13385771.1224287/1‑300 (MQ=60)
                                                                                    GATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGT                                                                                                                                                                                                 >  SRR13385771.1517392/1‑301 (MQ=60)
                                                                                                aagtggtactgtagtacagacgtgtgctcttccgatcgTGCGAAAAGAAACTTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGATCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGTATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGTTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCA                                                                                                                                                                                     <  SRR13385771.1813694/263‑1 (MQ=60)
                                                                                                    TAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGCAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTT                                                                                                                                                                                 >  SRR13385771.1402674/1‑301 (MQ=60)
                                                                                                         GTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATT                                                                                                                                                                             <  SRR13385771.1236783/300‑1 (MQ=60)
                                                                                                           TTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCC                                                                                                                                                                           <  SRR13385771.1064063/300‑1 (MQ=60)
                                                                                                               GGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGG                                                                                                                                                                                                                                                                     >  SRR13385771.714205/1‑206 (MQ=60)
                                                                                                                                   GTCTGCGAAAAGAAACGTGGATAAGGAATATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAA                                                                                                                                                   <  SRR13385771.1295044/300‑1 (MQ=60)
                                                                                                                                        CGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGGTTCACGGGAGCATTTACCGTCGGAAGAATAATCGGTTGCCATTTAACTAAGCAGAGCTTGCCCATGTTCAATGCACCCATGTTAATTCCTTTGTTCCAGATAGGATTGTACAAAATATT                                                                                                                                             >  SRR13385771.680511/1‑301 (MQ=60)
                                                                                                                                          AAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTC                                                                                                                                           <  SRR13385771.541290/301‑1 (MQ=60)
                                                                                                                                              GAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATC                                                                                                                                       >  SRR13385771.1721050/1‑301 (MQ=60)
                                                                                                                                                             ATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGAAAATTGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTG                                                                                                                         >  SRR13385771.887643/1‑300 (MQ=60)
                                                                                                                                                                                                        TGAGCAAGATAGTGCTATAAAAGGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGT                                                                             >  SRR13385771.874540/1‑301 (MQ=60)
                                                                                                                                                                                                                              GGTCTGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCTATTTAACTAAGCAGAGCTTTCCCATGCTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAAAATGTCAATCCCATAGGGAAATAGAGTCTAATAAAATCGTCTTTGCCCTAACTTGGATTGGGTTCGGTCTCTCACTAGGTCTTCACATT                                                        >  SRR13385771.827569/1‑300 (MQ=60)
                                                                                                                                                                                                                                  TGTTGCCCTTTTTTGCCTATTATGCAAGCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTT                                                   >  SRR13385771.1008173/1‑301 (MQ=60)
                                                                                                                                                                                                                                                             GCATCGCTTTACTAGTGTGGATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTAC                        <  SRR13385771.523562/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                   ATTTACTAGTGTGGAAACAACCAAGCTTTATTACACTATCTTTCATCCATACCGTAAGTTTCACGGGAGCATTTAACGTCGGAAGACTAATCGCTAGCCATTTAACTAAACAGAGCTTTACAATGTTCAATGCACACATGTTAATTACTTTGTGCAAGCTAGAATTGTACAAAATATGTCAAACCCTTTGGGGAATTGAGTATAATAAAATCGTCATTACCCTATATTGGCTTGGGTTCGGTCTCTCACTAGGTATTCACATTACGTTTAAGAACGAAATTATCCATGAATTTCCTGAGT                   >  SRR13385771.1041603/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                 ATACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAGTCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATG    <  SRR13385771.1656349/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                   ACAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCT  >  SRR13385771.392547/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                            
GGTATATACGGAAAACAGGTAATCTGGCATACCTACTTATTTACAATTACAGTTGGTGATAAGGTAATTGATGTAGACACTCTAGATATTGTTTTTTCCCTAGCTGTTTTCGGTTTGGTTATGAACGCATTGTCTGCGAAAAGAAACGTGGATAAGTATTATAGAAACAGCACTTCTTCGGCCAACAATATCACGCAAATTGAGCAAGATAGTGCTATAAAAGGTCTTTTGCCCTTTTTTGCCTATTATGCAAGCATTGCTTTACTAGTGTGGATGCAACCAAGCTTTATTACACTCTCTTTCATCCTTTCCGTTGGTTTCACGGGAGCATTTACCGTCGGAAGAATAATCGTTTGCCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCT  >  BK006934/355476‑356051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑