Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATGAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCCTATTACTGTATATGTGACTTTACATTGTTACTTCCGCGGCTATTTGACGTTTTCTGCTTCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCGCCCAGCTCTCTGAC  >  BK006934/355832‑356413
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                          
CCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACCTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCA                                                                                                                                                                                                                                                                                           <  SRR13385771.730849/301‑1 (MQ=60)
     TAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCT                                                                                                                                                                                                                                                                                       >  SRR13385771.1340263/1‑300 (MQ=60)
                            TTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCC                                                                                                                                                                                                                                                               >  SRR13385771.519821/1‑301 (MQ=60)
                              CAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATCTTCAATCTCA                                                                                                                                                                                                                                                             <  SRR13385771.1405583/301‑1 (MQ=60)
                                               TTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGACTTTCAATCTCAAGTTTGTGTACTAGAT                                                                                                                                                                                                                                             >  SRR13385771.1519743/1‑300 (MQ=60)
                                                TCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCA                                                                                                                                                                                                                                                                   <  SRR13385771.133001/277‑1 (MQ=60)
                                                               AGTATTGTACAAAATATGTCTATCCCTTTGGTGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGA                                                                                                                                                                                                                             <  SRR13385771.463150/300‑1 (MQ=60)
                                                                  ATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACACGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACT                                                                                                                                                                                                                          >  SRR13385771.610890/1‑300 (MQ=60)
                                                                              ATGTCTATCCCTTTTGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCTCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTT                                                                                                                                                                                                              <  SRR13385771.723168/300‑1 (MQ=60)
                                                                                GTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAA                                                                                                                                                                                                           <  SRR13385771.921128/301‑1 (MQ=60)
                                                                                 TCTATCCCTGTGTGGAATTGAGTCTAATAAAATCTTTTTTGCCCTATCTTGGCTTGGTTTCGGTCTCTCACTAGGTGTTCACATTATGTGTATGATTGACAGTATCCATGAATTTACTTATTACCTTGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTTACATAAATCTCACTTTTTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAATTTTGTGTAATATATAGCGTTATATTATAGAACTATAAAGGTCCTTGAA                                                                                                                                                                                                           <  SRR13385771.1673996/300‑1 (MQ=60)
                                                                                          TTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATA                                                                                                                                                                                                   <  SRR13385771.1748511/299‑1 (MQ=60)
                                                                                               GAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCACTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTT                                                                                                                                                                                            >  SRR13385771.1361447/1‑301 (MQ=60)
                                                                                                      GTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTA                                                                                                                                                                                     <  SRR13385771.740543/301‑1 (MQ=60)
                                                                                                                      TTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGAC                                                                                                                                                                     >  SRR13385771.1579471/1‑301 (MQ=60)
                                                                                                                                  TGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAAT                                                                                                                                                                                                          >  SRR13385771.1668486/1‑252 (MQ=60)
                                                                                                                                    GCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACCTTGCTACT                                                                                                                                                       >  SRR13385771.1317648/1‑301 (MQ=60)
                                                                                                                                      TTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATACATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTC                                                                                                                                                     >  SRR13385771.1503068/1‑301 (MQ=60)
                                                                                                                                       TGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTC                                                                                                                                                     <  SRR13385771.541790/300‑1 (MQ=60)
                                                                                                                                       TGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTGTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTC                                                                                                                                                     <  SRR13385771.121270/300‑1 (MQ=60)
                                                                                                                                        GGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCG                                                                                                                                                   <  SRR13385771.1220673/301‑1 (MQ=60)
                                                                                                                                         GGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTTCTACTTCCGC                                                                                                                                                  >  SRR13385771.717297/1‑301 (MQ=60)
                                                                                                                                                 CTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCCCAACAATCAATCTATCGCCCTGTGCGATTTTCAATCTCAAGTTTGTGTCCTAGATAGCGTTCTATTATCGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTT                                                                                                                                          >  SRR13385771.325712/1‑301 (MQ=60)
                                                                                                                                                     CACTAGGTTTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGACAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGAC                                                                                                                                       <  SRR13385771.1067757/300‑1 (MQ=60)
                                                                                                                                                                  CATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAG                                                                                                                         <  SRR13385771.1625031/301‑1 (MQ=60)
                                                                                                                                                                                    CATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACCTAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCA                                                                                                        >  SRR13385771.1233606/1‑300 (MQ=60)
                                                                                                                                                                                      TTATCCATGAATTTACTGAGTACCTGTACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTCTGTGT                                                                                                                                                                                                                                                    >  SRR13385771.628591/1‑158 (MQ=60)
                                                                                                                                                                                                 TTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAACTCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGCGATTTTCCATCTCACGTTTGTGTAATAGATAGCGTTATATTATAGAACTATCAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATCTGTGACTTTCCATTGCTACTTCCGCGGCTATTTGCCGTTTTTTGCTCCAGGTGCGGCTTGCAGGGCACAGTGTCAGcacat                                                                                          >  SRR13385771.10027/1‑296 (MQ=60)
                                                                                                                                                                                                        AGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGCTTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCC                                                                                     >  SRR13385771.1326678/1‑299 (MQ=60)
                                                                                                                                                                                                                        TGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACCACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGAGTTATCTTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTCTTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTCTTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCCAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAA                                                                    >  SRR13385771.1630417/1‑300 (MQ=60)
                                                                                                                                                                                                                                CCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGATTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACGTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGA                                                            <  SRR13385771.1594042/300‑1 (MQ=60)
                                                                                                                                                                                                                                 CATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAA                                                          <  SRR13385771.596876/301‑1 (MQ=60)
                                                                                                                                                                                                                                    CAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACG                                                       <  SRR13385771.340923/301‑1 (MQ=60)
                                                                                                                                                                                                                                    CAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACG                                                       <  SRR13385771.1704855/301‑1 (MQ=60)
                                                                                                                                                                                                                                                 CTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATAT                                          >  SRR13385771.351115/1‑301 (MQ=60)
                                                                                                                                                                                                                                                               ACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCC                            >  SRR13385771.1552014/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                           CTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGCCGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTAGAGGACTGTCCTCTATACACCC                 >  SRR13385771.759872/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                    ATTCGAAAACAAGGCACAACAATCAATCGATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTAGAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGGCCTCTATACAACCACCCAGCTC        <  SRR13385771.168869/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                       CGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAAGCTCAAGTGTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCT     <  SRR13385771.1357803/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                          AAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAGGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGAC  >  SRR13385771.1185766/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                          
CCATTTAACTAAGCAGAGCTTTCCCATGTTCAATGCACCCATGTTAATTCCTTTGTGCCAGATAGTATTGTACAAAATATGTCTATCCCTTTGGGGAATTGAGTCTAATAAAATCGTCTTTGCCCTATCTTGGCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATGAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCCTATTACTGTATATGTGACTTTACATTGTTACTTCCGCGGCTATTTGACGTTTTCTGCTTCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCGCCCAGCTCTCTGAC  >  BK006934/355832‑356413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑