Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AACAAAATAAACACTTTAGCTTGCATGTAATTTTAGGTGCAGTGGTAGATCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCTTAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCGCTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGGTGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTACTCAAGTAGTTTTTCTGTT  >  BK006934/357363‑357961
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                           
AACAAAATAAACACTTTAGCTTGCATGTACTTTTAGGTGCAGTGGTAGATCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTTAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAACATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCAT                                                                                                                                                                                                                                                                                                            >  SRR13385771.936225/1‑301 (MQ=60)
    AAATAGTCACTTTAGCTTGCATGTAATTTTAGGTGCAGTTGTATGTCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAATTTGCTTTAAAAAATGGATCAAAATTGATGTTTGTTTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTTAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAAT                                                                                                                                                                                                                                                                                                        <  SRR13385771.1301022/301‑1 (MQ=60)
           CACTTTAGCTTGCATGTAATTTTAGGTGCAGTGGTAGATCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGAC                                                                                                                                                                                                                                                                                                 <  SRR13385771.1485146/301‑1 (MQ=60)
                                   GGTGCAGTGGTAGATCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGG                                                                                                                                                                                                                                                                         >  SRR13385771.1110839/1‑301 (MQ=60)
                                        AGTGGTAGATCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCGAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCTTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAAGGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTA                                                                                                                                                                                                                                                                    <  SRR13385771.1521217/301‑1 (MQ=60)
                                              AGATCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATACATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGC                                                                                                                                                                                                                                                               >  SRR13385771.1019691/1‑300 (MQ=60)
                                                 TCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAACGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACCAGGTGCACC                                                                                                                                                                                                                                                            >  SRR13385771.185092/1‑300 (MQ=60)
                                                          CTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAATTGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCCAAAAGCCGATCCAAAGTGGCACTATGTGCATCTAACTCTGGG                                                                                                                                                                                                                                                  >  SRR13385771.961701/1‑301 (MQ=60)
                                                             TCATGGGGAGAATCCCGGAATTCCTTATTATGAACTGTCTTTAAAAAATGGATCAAGAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCTAACTCTGGGGC                                                                                                                                                                                                                                                <  SRR13385771.822526/300‑1 (MQ=60)
                                                                      GAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGTCGCAGCCTTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCC                                                                                                                                                                                                                                      >  SRR13385771.514360/1‑301 (MQ=60)
                                                                                                   CTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGTACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCACGTCAATCCACACCAAT                                                                                                                                                                                                         >  SRR13385771.669686/1‑301 (MQ=60)
                                                                                                        AAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAA                                                                                                                                                                                                          >  SRR13385771.124091/1‑295 (MQ=60)
                                                                                                                        GGATGTTTGTGTATGTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGGGTCAAGTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGA                                                                                                                                                                                    <  SRR13385771.1512177/301‑1 (MQ=60)
                                                                                                                          ATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGCGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAACAGAAAAATGCCATCACTGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACAAATGGAAGCTTCGAAGGACAATGAGG                                                                                                                                                                                  >  SRR13385771.1558838/1‑301 (MQ=60)
                                                                                                                           TGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTAGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGG                                                                                                                                                                                  >  SRR13385771.158631/1‑300 (MQ=60)
                                                                                                                                  GTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTT                                                                                                                                                                           <  SRR13385771.1338383/300‑1 (MQ=60)
                                                                                                                                           AGAAATGAAAACGCCTCCTCTTATGATTAGAGGAAGATCACCTTCTAACTAGGCGTCATCTCAGCGAATAACTGTAAGAACACAGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCA                                                                                                                                                                 <  SRR13385771.744191/301‑1 (MQ=60)
                                                                                                                                                                TATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTT                                                                                                                                            >  SRR13385771.1498560/1‑301 (MQ=60)
                                                                                                                                                                      AAGAGGAAGATCACCTTCTAACGATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACAT                                                                                                                                      <  SRR13385771.1672430/301‑1 (MQ=60)
                                                                                                                                                                          GGAAGAGCACCGTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCC                                                                                                                                  <  SRR13385771.1888304/301‑1 (MQ=60)
                                                                                                                                                                              GATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAA                                                                                                                              <  SRR13385771.770106/301‑1 (MQ=60)
                                                                                                                                                                                TCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGATTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCTAAAAGGCGATCCAAAGTGGCACTATGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAAC                                                                                                                             <  SRR13385771.1641952/300‑1 (MQ=60)
                                                                                                                                                                                  ACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGACAGTTGCCTCAATGCAAGACATTCGAAAAGGAGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTAGCCTATCAAATCTCGTCAACCCCCACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCCAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAA                                                                                                                           >  SRR13385771.644209/1‑300 (MQ=60)
                                                                                                                                                                                         AACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATGCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGA                                                                                                                     <  SRR13385771.996420/299‑1 (MQ=60)
                                                                                                                                                                                         AACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGAT                                                                                                                    <  SRR13385771.1805033/300‑1 (MQ=60)
                                                                                                                                                                                                  TCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACGCTTGAACATATCCAGAACAAACTGGATGCTTTGA                                                                                                             >  SRR13385771.134769/1‑298 (MQ=60)
                                                                                                                                                                                                                      GAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCGATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCT                                                                                      <  SRR13385771.1114007/301‑1 (MQ=60)
                                                                                                                                                                                                                                             CCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAACATGAGGATCCGTTCTTCAGGCCAAACAAAAGGGCGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTC                                                               >  SRR13385771.132163/1‑301 (MQ=60)
                                                                                                                                                                                                                                                  CAAAACAGCACAAAAAGAAAAATGCCAACCATGGCGCAGCCGTTAAATGAAAGTCGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAAAAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAG                                                          <  SRR13385771.581595/301‑1 (MQ=60)
                                                                                                                                                                                                                                                            CAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCATACATGCAAGACCTTCGAACAGGAGATCCAAAGTGGCACTAGGTGCAACGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACCCCAATGGAAGCTTAGAAGGAAAATGAGGATCCGTTCTTCAGGCCACATAAACGGGTGGAGACTCTTGCACATATCAAGAACAAACTGGATGATTTGAAAAATCAATGTCCAGATTCCTATCTGAACTATCCGAGTTCATCTTCAAGAGGTCTGGACGG                                                >  SRR13385771.1269924/1‑301 (MQ=60)
                                                                                                                                                                                                                                                               AAAGAAAAATGCCATCAATGGCGCAGCCGTGAAATGAAAGTTGCATAAATGCAAGACCTTCTAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGTGCCTCCATCTCGCCGATCAAATCTCGTCAATCCACACCAATGGAAGCGTCGAAGGAAAATGAGGATCCGTGCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTG                                             <  SRR13385771.1032088/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                      AATGCCATCAATGGCGGAGACGTTAAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTGTTTAGAA                                      <  SRR13385771.41376/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                    CGCAGCCGTTAAATGAAAGTGGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTGTTTAGAAAAGGAGGATTTAGT                        <  SRR13385771.556675/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                            TTAAATGCAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTCGGTGCACCGAACTCTGGGGCCTCCATCTCGACTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGCACAAT                                                                                                        >  SRR13385771.585267/1‑213 (MQ=60)
                                                                                                                                                                                                                                                                                              AAATGAAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTATTCAAGT              <  SRR13385771.465591/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                   AAAGTTGCATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTATTCAAGTAGTTT         <  SRR13385771.1337638/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                          CATAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCACTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGATGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTATTCAAGTAGTTTTTCTGTT  <  SRR13385771.454515/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                           
AACAAAATAAACACTTTAGCTTGCATGTAATTTTAGGTGCAGTGGTAGATCCAGATACCTTTCATGGGGAGAATCCCGGAATTCCTTATGATGAACTGGCTTTAAAAAATGGATCAAAAGGGATGTTTGTGTATTTGCAAGAAATGAAAACGCCTCCTCTTATTATTAGAGGAAGATCACCTTCTAACTATGCGTCATCTCAGCGAATAACTGTGAGAACACCGTCGAGTGTCAATTCCTCACAAAACAGCACAAAAAGAAAAATGCCATCAATGGCGCAGCCGTTAAATGAAAGTTGCTTAAATGCAAGACCTTCGAAAAGGCGATCCAAAGTGGCGCTAGGTGCACCGAACTCTGGGGCCTCCATCTCGCCTATCAAATCTCGTCAATCCACACCAATGGAAGCTTCGAAGGAAAATGAGGATCCGTTCTTCAGGCCAAATAAAAGGGTGGAGACTCTTGAACATATCCAGAACAAACTGGGTGCTTTGAAAAATCAATGTCCAGATTCCTCTCTGAAATATCCGAGTTCATCTTCAAGAGGTATGGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTACTCAAGTAGTTTTTCTGTT  >  BK006934/357363‑357961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑