Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAACAGCGTATTCACTGTAATCCTCTTGGAGACCCTGCACAGCACCTGTCACGGCTAGTAAAACGAAAAGAAAACAACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAATATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATTATGCATTGAAAAAGGCCGGAGT  >  BK006934/369692‑370271
                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                  
AAACAGCGTATTCACTGTAATCGTCTTGGGGACCCTGCACAGCACCTGTCACGGCTAGTAAAGCGAAAAGAAAACAACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCA                                                                                                                                                                                                                                                                                         <  SRR13385771.1614349/301‑1 (MQ=60)
                             AGACCCTGCACAGCACCTGTCACGGCTAGTAAAACGAAAAGAAAACAACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACG                                                                                                                                                                                                                                                            <  SRR13385771.741328/301‑1 (MQ=60)
                                      ACAGCACCTGTCACGGCTAGTAAAACGAAAAGAAAACAACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGA                                                                                                                                                                                                                                                   <  SRR13385771.666847/301‑1 (MQ=60)
                                                    GGCTAGTAAAACGAAAAGAAAGCAACCCTACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAGCTTGGTCGTTTAAACCGTCGAAAATATTTTAGCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTGCGTAAAATTCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCGTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGT                                                                                                                                                                                                                                     <  SRR13385771.218223/301‑1 (MQ=60)
                                                        AGTAAAACGAAAAGAAAACAACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGGAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGGTATAAAAGTGA                                                                                                                                                                                                                                   <  SRR13385771.835396/299‑1 (MQ=60)
                                                          TAAAACGAAAAGAAAACAACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGACAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGACATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATAT                                                                                                                                                                                                                                >  SRR13385771.1729281/1‑300 (MQ=60)
                                                                           AACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCGTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCT                                                                                                                                                                                                              <  SRR13385771.1322955/301‑1 (MQ=60)
                                                                                    ACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTAC                                                                                                                                                                                                     >  SRR13385771.243360/1‑301 (MQ=60)
                                                                                                               TTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCATTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAACAATACGTACCACAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTcacacatcc                                                                                                                                                                          >  SRR13385771.1167217/1‑292 (MQ=60)
                                                                                                                 AACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCT                                                                                                                                                                         <  SRR13385771.563306/300‑1 (MQ=60)
                                                                                                                                  ATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAG                                                                                                                                                         >  SRR13385771.819388/1‑299 (MQ=60)
                                                                                                                                       GTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGT                                                                                                                                                  >  SRR13385771.1282116/1‑301 (MQ=60)
                                                                                                                                         GTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGCGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGG                                                                                                                                                >  SRR13385771.267466/1‑301 (MQ=60)
                                                                                                                                                      TTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAA                                                                                                                                      <  SRR13385771.1000694/298‑1 (MQ=60)
                                                                                                                                                            CCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAG                                                                                                                                                                                <  SRR13385771.1174940/250‑1 (MQ=60)
                                                                                                                                                             CGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACC                                                                                                                             >  SRR13385771.1634253/1‑300 (MQ=60)
                                                                                                                                                               TCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATATGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACaaa                                                                                                                           >  SRR13385771.1030282/1‑297 (MQ=60)
                                                                                                                                                                CGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGCGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGAAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACA                                                                                                                          >  SRR13385771.1037799/1‑300 (MQ=60)
                                                                                                                                                                CGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAA                                                                                                                         <  SRR13385771.1271061/301‑1 (MQ=60)
                                                                                                                                                                   AAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAA                                                                                                                      <  SRR13385771.1629420/301‑1 (MQ=60)
                                                                                                                                                                       ATTTTATCCTTCCTTCCATTTAGTTGTAACCATGGTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTAGAAAGGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCGCATGGGTTTACCAAAGAGGGAGTGGATTGATCGAAGCTGTCACCACAAGAACTA                                                                                                                   <  SRR13385771.656422/300‑1 (MQ=60)
                                                                                                                                                                            ATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGAGTTATCGAAGCTGTCACCACAAGAACTAAAATTG                                                                                                             >  SRR13385771.1523537/1‑301 (MQ=60)
                                                                                                                                                                                                     CATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCAT                                                                                    <  SRR13385771.420624/301‑1 (MQ=60)
                                                                                                                                                                                                         TTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCA                                                                                 <  SRR13385771.371965/300‑1 (MQ=60)
                                                                                                                                                                                                             AGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTATTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGCGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAA                                                                             >  SRR13385771.1836075/1‑300 (MQ=60)
                                                                                                                                                                                                                        AAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAG                                                                 <  SRR13385771.1648626/301‑1 (MQ=60)
                                                                                                                                                                                                                          ATCCGCAGTCAGAGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGAC                                                               <  SRR13385771.1140128/301‑1 (MQ=60)
                                                                                                                                                                                                                                             GAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAA                                                                                                                                                                                                                                                                  >  SRR13385771.1728370/1‑87 (MQ=60)
                                                                                                                                                                                                                                                AATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAAT                                          >  SRR13385771.569514/1‑300 (MQ=60)
                                                                                                                                                                                                                                                               ATGATCTTTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGA                          <  SRR13385771.623555/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                      TTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGACCTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATT                        <  SRR13385771.622020/296‑1 (MQ=60)
                                                                                                                                                                                                                                                                      TTTAAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATTAT                      <  SRR13385771.817691/298‑1 (MQ=60)
                                                                                                                                                                                                                                                                         AAATTACAGGTTATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATCACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATTATGCATTG                >  SRR13385771.462468/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                               CAGGTTATCGCGGTAGAATATTGGGGGTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATGTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATTATGCATTGAAAAAG          <  SRR13385771.1118610/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                    TATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACAAAAGAGGGAGTGGATTTATCGACGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATTATGCATTGAACAAGGCCGG     >  SRR13385771.1776398/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                    TATCGCGGGAGAAGATTGGGGTTCAGAAAGACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCGCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATTATGCATTGAAAAAGGCCG      <  SRR13385771.224255/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                     ATCGCGGGAGAAGATTGGGGTTCAGAAATACAACACATAGAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCGCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGGCAGCGGAGATTATGCATTGAAAAAGGCCGG     <  SRR13385771.1829074/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                       CGCGGGAGAAGATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGCCAATATTTTGACAGCGGAGATTATGCATTGAAAAAGGCCGGAGT  >  SRR13385771.176858/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                  
AAACAGCGTATTCACTGTAATCCTCTTGGAGACCCTGCACAGCACCTGTCACGGCTAGTAAAACGAAAAGAAAACAACCCCACAACGAATTCATGTGCAACATGATATAACTTAACACTCTGGTTTGTTTATATAGTGTTAACTTGGTCTTTTAAACCGTCGAAAATATTTTATCCTTCCTTCCATTTAGTTGGAACCATTTTCTAGTTCTTCGTAAAATCCGCAGTCAGCGCAGGAGAAAATAGAACGAGACAAATGATCTTTTAAATTACAGGTTATCGCGGGAGAATATTGGGGTTCAGAAATACAACACATATAAACAAAAATACGTACCAAAGAAGTGTTATAAAAGTGATATAACTATGTCAGAGGATCTTTCACCTACAAGCAGCAGGGTGGATTTGAGCAATCCTCATGGGTTTACCAAAGAGGGAGTGGATTTATCGAAGCTGTCACCACAAGAACTAAAATTGTATAAAATGTATGGGAAGCTTCCATCCAAAAAAGATCTGTTAAGACATAAGATGCAGGATCGTCAATATTTTGACAGCGGAGATTATGCATTGAAAAAGGCCGGAGT  >  BK006934/369692‑370271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑