Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTGTAAACATAAAAATACACACATACCACAATTACACTCTCTCATCGACTCAATGACTGCTGGTTCTGCCCCCCCTGTTGATTACACTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATAATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATATGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTTAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCGACCACTGTGATGATTGAAGAGTTTACTTTCACCCCGGCTATGTCCAATGTGGAGGCTAC  >  BK006934/375657‑376241
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                          
GTGTAAACATAAAAATACACACATACCACCATTACACTCTCTCATCAACTCAATGACTGCTGGTTCTGCCCCCCCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACG                                                                                                                                                                                                                                                                                              <  SRR13385771.953785/301‑1 (MQ=60)
      ACATAAAAATACACACATACCACCATTACACTCTCTCATCAACTCAATGACTGCTGGTTCTGCCCCCCCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCAT                                                                                                                                                                                                                                                                                        >  SRR13385771.348021/1‑301 (MQ=60)
                ACACACATACCACCATTACACTCTCTCATCAACTCAATGACTGCTGGTTCTGCCCCCCCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATACATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAACAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGG                                                                                                                                                                                                                                                                              >  SRR13385771.1545827/1‑301 (MQ=60)
                          CACCATTACACTCTCTCATCAACTCAATGACTGCTGGTTCTGCCCCCCCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCC                                                                                                                                                                                                                                                                      >  SRR13385771.401649/1‑299 (MQ=60)
                                              AACTCAATGACTGCTGGTTCTGCCCCCCCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTT                                                                                                                                                                                                                                                <  SRR13385771.1773709/301‑1 (MQ=60)
                                                    ATGACTGCTGGTTCTGCCCCACCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCC                                                                                                                                                                                                                                          <  SRR13385771.351926/301‑1 (MQ=60)
                                                                TCTGCCCCCCCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAA                                                                                                                                                                                                                               <  SRR13385771.736594/300‑1 (MQ=60)
                                                                 CTG‑CCCCCCTGTTGATTACGCTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACC                                                                                                                                                                                                                            >  SRR13385771.707553/1‑301 (MQ=60)
                                                                                      CTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGCATCTATGGATTTGACAATATCAAAAGTTCCTTTTACTGATAACCCAAAATGGCCTGATTCGTTTCCCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCCCTCTT                                                                                                                                                                                                        >  SRR13385771.269905/1‑301 (MQ=60)
                                                                                       TTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATAC                                                                                                                                                                                                                                     <  SRR13385771.1673406/271‑1 (MQ=60)
                                                                                            TAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTT                                                                                                                                                                                                  >  SRR13385771.696233/1‑301 (MQ=60)
                                                                                                GAAGAACTTCCAACCGTTTCTCTCACGAAGAGTAGAAAATAGATCTCTGCAAAGCTTTCGGGATGCTTCTGCCATCTCAGATGCCGTCCTTGAGCTAGCTGGTGGACTGCCCACAGAGCGATTTTTTCCTATCGAATCCCTGGCTCTGAAACTCTCCCCAGTTCATTTCAATGATAACCCAAAATGGCATGATTCGCTTCCCACGGCGCATTTGGACTTGGGATCCCCCAGTCAGCTCCCCATCGCCCGTTCTTCCCCATACGCAGAAACCCAGGGCTTACCCCCTCTCTTACACTTTGTG                                                                                                                                                                                              >  SRR13385771.1593220/1‑301 (MQ=60)
                                                                                                    AACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTGATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAG                                                                                                                                                                                          <  SRR13385771.830547/301‑1 (MQ=60)
                                                                                                                    TCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCA                                                                                                                                                                                                                           <  SRR13385771.1224505/252‑1 (MQ=60)
                                                                                                                          GAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGAGTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCG                                                                                                                                                                    <  SRR13385771.652998/301‑1 (MQ=60)
                                                                                                                             GAGTAGAAAATAGATCTCTGCAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAACAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCC                                                                                                                                                                 <  SRR13385771.1155071/301‑1 (MQ=60)
                                                                                                                              AGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCA                                                                                                                                                                <  SRR13385771.240562/301‑1 (MQ=60)
                                                                                                                                        AGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCCCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGCATTAATCGCCCAGCCTTTTCCG                                                                                                                                                      >  SRR13385771.1511079/1‑301 (MQ=60)
                                                                                                                                            CTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGCATTAATCGCCCAGCCTTTTCCGATG                                                                                                                                                   >  SRR13385771.1549040/1‑300 (MQ=60)
                                                                                                                                                               TGCTTCTGATATCTCAGATGAAGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGG                                                                                                                                                                                                                        >  SRR13385771.1724649/1‑212 (MQ=60)
                                                                                                                                                                  TTCTGATATCTCAGATGACGTCATTGAGATAGCTGGTGGAATGCAAAACGAGAGATTTTTTCCTATAGAATCTATGGATTTGAAAATATAAAAAGTTCACTTTAATGATAACCACAAATGGACTGATTCGTTTACCACGGCGCATTTGGACTAGGGATCCCCCCGTGAGATACCAATTGCCCGTTATTTCCAATACGCAGAAAACAAGGGTTTACCCCATCTCTTCCATTTTGAGAACGATTTTGTGTCCCGAATTAATCGCACAGCCTTTTCCGATGAGACGGCGTCTAAATGGGATGCC                                                                                                                            >  SRR13385771.1591751/1‑301 (MQ=60)
                                                                                                                                                                                  GACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGT                                                                                                            <  SRR13385771.604460/301‑1 (MQ=60)
                                                                                                                                                                                       CATTGGGCTAGCTGGTGGAATGCCAACCGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTAGTTTAACCCGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGAAGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAAC                                                                                                       <  SRR13385771.633113/301‑1 (MQ=60)
                                                                                                                                                                                          TGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGAT                                                                                                    >  SRR13385771.399574/1‑301 (MQ=60)
                                                                                                                                                                                           GAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTGTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGAC                                                                                                                                                                                                                                                                                  <  SRR13385771.1556432/126‑1 (MQ=60)
                                                                                                                                                                                                                                     GAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCAACC                                                          >  SRR13385771.45038/1‑300 (MQ=60)
                                                                                                                                                                                                                                      AATCTATGGATTTGAAAATATCAAAAGTTCCTTGTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTGCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCAACCAC                                                        <  SRR13385771.1362116/301‑1 (MQ=60)
                                                                                                                                                                                                                                           ATGGATTTGAAAATATGTAAAGTTCCTTTTATTGATAACCCAATATGGTATGGTTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGCAACCAAGGGTTTACCCCCTCTCCTACTTTTTGTGAGAGATTTTGTGTCCAtgattaagcgccccgcctctcccgccccgacgcagtctccctcgcccgccctcctcccccgccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc                                                    <  SRR13385771.270691/300‑123 (MQ=60)
                                                                                                                                                                                                                                           ATGGATTTGAAAATAGCAAAAGTGCCTTTTAATGATAACCCTAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGGGAGCTACCCATTGCACGTTCTTTCCAAGACGCAGAAACCAAGGGTTTACCCCCTCTCTGACATTTTGTGAAAGAGTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCAACCACTGTG                                                    <  SRR13385771.270724/300‑1 (MQ=60)
                                                                                                                                                                                                                                                           CAAAAGTTCCTTTTAATGATAACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTTGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGCCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATCTGCGACGAATCAACCACTGTGATGATTGAAGAGTTTAC                                   >  SRR13385771.1153038/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                         AATGATAACCCAAAATGGCATGATTCGTTTACCACTGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCAACCACTGTGATGATTGAAGAGTTTACTTTCACCCCGGCT                      >  SRR13385771.1906621/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                            GATAACCCAAAATGGCATGATTCGCTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCCGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGCAACAATTTGCGACGACTCAACCACTGTGATGATTGAAGAGTTTACTTTCACCCCGGCTATGT                  >  SRR13385771.29969/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                               AACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCAACCACTGTGATGATTGAAGAGTTTACTTTCACCCCGGCTATGTCCA               <  SRR13385771.1108384/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                               AACCCAAAATGGCATGATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCAACCACTGTGATGATTGAAGAGTTTACTTTCACCCCGGCTATGTCC                <  SRR13385771.38374/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                              GATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATACGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTGAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCAACCACTGTGATGATTGAAGAGTTTACTTTCACCCCGGCTATGTCCAATGTGGAGGCTAC  >  SRR13385771.1749072/1‑299 (MQ=60)
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                          
GTGTAAACATAAAAATACACACATACCACAATTACACTCTCTCATCGACTCAATGACTGCTGGTTCTGCCCCCCCTGTTGATTACACTTCCTTAAAGAAGAACTTCCAACCGTTTCTCTCCAGAAGAGTAGAAAATAGATCTCTGAAAAGCTTTTGGGATGCTTCTGATATCTCAGATGACGTCATTGAGCTAGCTGGTGGAATGCCAAACGAGAGATTTTTTCCTATCGAATCTATGGATTTGAAAATATCAAAAGTTCCTTTTAATGATAACCCAAAATGGCATAATTCGTTTACCACGGCGCATTTGGACTTGGGATCCCCCAGTGAGCTACCCATTGCACGTTCTTTCCAATATGCAGAAACCAAGGGTTTACCCCCTCTCTTACATTTTGTTAAAGATTTTGTGTCCAGAATTAATCGCCCAGCCTTTTCCGATGAGACGGAGTCTAACTGGGATGTCATCCTTTCTGGCGGGTCCAACGATTCAATGTTTAAGGTTTTTGAAACAATTTGCGACGAATCGACCACTGTGATGATTGAAGAGTTTACTTTCACCCCGGCTATGTCCAATGTGGAGGCTAC  >  BK006934/375657‑376241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑