Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTA‑T‑TTTCATGATGTATGGGTGTATCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAGAGAATGCTATGGAAAATAATA‑‑TGTAGCAACATAGCCAACTAATTGCCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAAGTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTATTATCAAAAATTGTGGTTTTGTTAATACAAAAGCTGATATATATATAATATGGCATTTAGT  >  BK006934/383001‑383549
                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                            
ATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATAAATTAGCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCG                                                                                                                                                                                                                                                             <  SRR13385771.279629/301‑1 (MQ=60)
        TGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTACAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTT                                                                                                                                                                                                                                                      >  SRR13385771.649508/1‑300 (MQ=60)
            ggtaaaatgaagaggaagtctgactGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTGTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTCTATGTTGGTACAGTAGTTTATTGACATCCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAAC                                                                                                                                                                                                                                                 >  SRR13385771.1340125/26‑301 (MQ=60)
            GGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTGCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGGCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAAC                                                                                                                                                                                                                                                 <  SRR13385771.892479/301‑1 (MQ=60)
                                      CATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACA                                                                                                                                                                                                                        >  SRR13385771.881365/1‑300 (MQ=60)
                                         TTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTACCACTGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAACCGGTTAAATATTGAAAAAGTTTCACAAGAC                                                                                                                                                                                                                    >  SRR13385771.1872306/1‑301 (MQ=60)
                                                   GATATTTTTTTTTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAA                                                                                                                                                                                                          <  SRR13385771.1518510/301‑1 (MQ=60)
                                                   GATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCA                                                                                                                                                                                                           >  SRR13385771.1340719/1‑300 (MQ=60)
                                                            TTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATC                                                                                                                                                                                                  <  SRR13385771.1765117/300‑1 (MQ=60)
                                                              GTATCAAGACTTCTACCAATGTCAGGATTTA‑TGTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATTTAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATGGTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTGCGCTTTCTTAAAACGGTTAAATAGTGAAAAAGTTACACAAGACACGAAATCAAAAAGGATCCAT                                                                                                                                                                                               <  SRR13385771.1121276/301‑1 (MQ=60)
                                                                         TCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAACGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAA                                                                                                                                                                                     >  SRR13385771.1281932/1‑300 (MQ=60)
                                                                              CAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAG                                                                                                                                                                               <  SRR13385771.1506931/301‑1 (MQ=60)
                                                                                ATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCCCTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGC                                                                                                                                                                              >  SRR13385771.1434300/1‑300 (MQ=60)
                                                                                            atT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACT                                                                                                                                                                 >  SRR13385771.1289665/3‑301 (MQ=60)
                                                                                                   CATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTA                                                                                                                                                           <  SRR13385771.322955/301‑1 (MQ=60)
                                                                                                        TGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGCAAATAATATGTGTCGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGACATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAA                                                                                                                                                        >  SRR13385771.1727058/1‑299 (MQ=60)
                                                                                                           ATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAATTGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATT                                                                                                                                                   >  SRR13385771.829925/1‑301 (MQ=60)
                                                                                                                       GATGTGCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATTGAAAATAATATGTGTAGCAACATTAACTATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTATTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAA                                                                                                                                       <  SRR13385771.469022/301‑1 (MQ=60)
                                                                                                                        ATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCAGTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTGCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAA                                                                                                                                      <  SRR13385771.588435/301‑1 (MQ=60)
                                                                                                                              GGATGTCACTTTCTTTTATTTTGAAGTTTGGTACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATTCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACA                                                                                                                                <  SRR13385771.373119/301‑1 (MQ=60)
                                                                                                                                 TGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTG                                                                                                                                                                                                                                                                         >  SRR13385771.250706/1‑161 (MQ=60)
                                                                                                                                  GTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAAGTAATTATCATGGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTGCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTTGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTG                                                                                                                             <  SRR13385771.173217/300‑1 (MQ=60)
                                                                                                                                           TTTTATTTTGAAGTTTGTGACAAAGAATGATATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTG                                                                                                                   >  SRR13385771.1465970/1‑301 (MQ=60)
                                                                                                                                                TTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTT                                                                                                                                                                                                                                             <  SRR13385771.903167/174‑1 (MQ=60)
                                                                                                                                                                    AATGCTATGGAAAATAATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCA                                                                                          <  SRR13385771.1140712/301‑1 (MQ=60)
                                                                                                                                                                                           aagcaacataaccaattaagtatCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGGTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACTGTTAAATATTGAAAAAGTTTCACAATACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAA                                                                   <  SRR13385771.1311015/278‑1 (MQ=60)
                                                                                                                                                                                               AACATAACCAATTAATTAGCATTGCATTAAATGTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACAGTCTTCTGGTGTTGACCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAGGCTACGCTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTA                                                               <  SRR13385771.470365/301‑1 (MQ=60)
                                                                                                                                                                                                     accaattaattatCATTGCATTAAATTTTGGTAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTGCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGTAAAGTTTATTTCATCAAAACTATTATCA                                                         <  SRR13385771.649289/288‑1 (MQ=60)
                                                                                                                                                                                                       CAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCA                                                                                                                                                                      <  SRR13385771.1196584/190‑1 (MQ=60)
                                                                                                                                                                                                                   ATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTCGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTATTATCAAAAATTGTGGTTTT                                           >  SRR13385771.1679672/1‑301 (MQ=60)
                                                                                                                                                                                                                                  GGAAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTATTATCAAAAATTGTGGTTTTGTTAATACAAAAGCT                            <  SRR13385771.1291835/301‑1 (MQ=60)
                                                                                                                                                                                                                                     AGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTATTATCAAAAATTGTGGTTTTGTTAATACAAAAGCTGAT                         >  SRR13385771.905003/1‑301 (MQ=60)
                                                                                                                                                                                                                                                             TATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTATTATCAAAAATTGTGGTTTTGTTAATACAAAAGCTGATATATATATAATATGGCATTTAGT  <  SRR13385771.1518122/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                            
ATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTA‑T‑TTTCATGATGTATGGGTGTATCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAGAGAATGCTATGGAAAATAATA‑‑TGTAGCAACATAGCCAACTAATTGCCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAAGTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTATTATCAAAAATTGTGGTTTTGTTAATACAAAAGCTGATATATATATAATATGGCATTTAGT  >  BK006934/383001‑383549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑