Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GACTGGCGGGTGCATGTTGCTGGGCCTTATTGATAATCGGGTTTTTAGGTTTCAATTTATGGGAAGATGGGACTACAAAGTCCATGCTGTTGGTCCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCACAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑TTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTCTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTA  >  BK006934/383944‑384543
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                            
GACTGGCGGGTGCATGCTGCTGGGCCTTATTGATAATCGGGTTTTTAGGTTTCAATTTATGGGAAGATGGGACTACAAAGTCCATGCTGTTGGTCCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCAT                                                                                                                                                                                                                                                                                                              <  SRR13385771.930230/301‑1 (MQ=60)
                                 TAATCGGGTTTTTAGGTTTCAATTTATGGGAAGATGGGACTACAAAGTCCATGCTGTTGGTCCGTGGAACGTCCATGCTAGGCTTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGT                                                                                                                                                                                                                                                                             >  SRR13385771.1407799/1‑301 (MQ=60)
                                         TTTTTAGGTTTCAATTTATGGGAAGATGGGACTACAAAGTCCATGCTGTTGGTCCGTGGAACGTCCATGCTAGGCTTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCC                                                                                                                                                                                                                                                                     >  SRR13385771.179543/1‑301 (MQ=60)
                                                                    GGGACTACAAAGTCCATGCTGTTGGTCCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTATCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGTGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACAC                                                                                                                                                                                                                                          >  SRR13385771.921755/1‑301 (MQ=60)
                                                                       ACTACAAAGTCCATGCTGTTGGTCCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTCTCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAA                                                                                                                                                                                                                                        >  SRR13385771.1123052/1‑300 (MQ=60)
                                                                                    TGCTGTTGGTCCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTT                                                                                                                                                                                                                         >  SRR13385771.733561/1‑301 (MQ=60)
                                                                                             TCCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACT                                                                                                                                                                                                                 >  SRR13385771.751245/1‑300 (MQ=60)
                                                                                              CCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTAC                                                                                                                                                                                                               >  SRR13385771.1573178/1‑301 (MQ=60)
                                                                                                   GAACGTCCATGCTAGGATTCATAGCCAATTTTTTATCCTATATTTGAGCCTACAAAGCATGAATCACCGACCAAAAGGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACAAAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATTTTTTTGGGGCTATTTTTCTTTTTGGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGA                                                                                                                                                                                                          <  SRR13385771.1647057/301‑1 (MQ=60)
                                                                                                         CCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCT                                                                                                                                                                                                    <  SRR13385771.465358/301‑1 (MQ=60)
                                                                                                             GCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTT                                                                                                                                                                                                 <  SRR13385771.824815/300‑1 (MQ=60)
                                                                                                                AGGATTCATAGCCAATTTTTTAGCCTCTATTTTAAGCTTCAAAGCATGGAGCACCGACCATAAAGTAGCAACAATGAACGATTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑ATGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTT                                                                                                                                                                                             <  SRR13385771.1561336/301‑1 (MQ=60)
                                                                                                                         AGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATC                                                                                                                                                                                    <  SRR13385771.583917/301‑1 (MQ=60)
                                                                                                                              ATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAA                                                                                                                                                                               <  SRR13385771.1871503/301‑1 (MQ=60)
                                                                                                                                               TTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGT                                                                                                                                                              >  SRR13385771.1857483/1‑301 (MQ=60)
                                                                                                                                                 AACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATACACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCATATTGGTAGTTAGCAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCCGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATG                                                                                                                                                            >  SRR13385771.619341/1‑301 (MQ=60)
                                                                                                                                                                                     AACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGAC                                                                                                                        >  SRR13385771.1800309/1‑301 (MQ=60)
                                                                                                                                                                                         ATGAACGCGTCAGGGATGATTGTCGGCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTGGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGG                                                                                                                    <  SRR13385771.569003/301‑1 (MQ=60)
                                                                                                                                                                                              CGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTT                                                                                                               >  SRR13385771.1657173/1‑301 (MQ=60)
                                                                                                                                                                                                CTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGG                                                                                                             >  SRR13385771.1015590/1‑301 (MQ=60)
                                                                                                                                                                                                            TTGTCGTCGATTGCATCATAAACGCCATTTTCTGTGTCGTTTTCGTTATTTGTCAATTACTGGTAGTCCTATTGGTAGTTCGAAACGTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATTCCTGCTCTACACAAAT‑CTGTGAAGGGTGCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTA                                                                                                  <  SRR13385771.1862826/300‑1 (MQ=60)
                                                                                                                                                                                                                                        TTTCTTATTCGTTGTCGTTAGTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATATGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTTTCTACACAAAT‑CTTGGAAGGGTTCAAGCACTACTTAGATGTCCTCTTTTTTGGAAGCATCTGGAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTTGTGTAAGTGTTATCAAGGACGGTGACGTGGTGTATGATAA                                                                      <  SRR13385771.1394030/300‑1 (MQ=60)
                                                                                                                                                                                                                                          TCTTATTCGTTTTCGTTATTTGTCCATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAAATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATG                                                                    <  SRR13385771.848094/300‑1 (MQ=60)
                                                                                                                                                                                                                                           CTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGGGGTGTATGATAATGG                                                                   >  SRR13385771.1602469/1‑300 (MQ=60)
                                                                                                                                                                                                                                              ATTCGTTTTCGTGAGTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATT                                                                <  SRR13385771.1100779/300‑1 (MQ=60)
                                                                                                                                                                                                                                                 CGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATG                                                            <  SRR13385771.1466402/301‑1 (MQ=60)
                                                                                                                                                                                                                                                      TCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAA                                                        >  SRR13385771.1783269/1‑300 (MQ=60)
                                                                                                                                                                                                                                                          TATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTCCACAAAT‑CTGTGACGGGTTCAAGCACTACTTAGATGGCATATTTTTTGGAAGAATCTGTAATGTGTTCACATTAATGATGGTTTACCAGACTTGGGCTATGACTACAGACGCCGAATTGGAATTTGGTGTAAGTGTTAGCACGGACGGTGAAGTGGTGTATGATAATGGATTTATGTGAAATGCT                                                   >  SRR13385771.1814720/1‑301 (MQ=60)
                                                                                                                                                                                                                                                             TTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGACTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTAAAAGACTTGGGATATGACTACCGACGACGACTTGGCATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGAGTATGATAATGGATTTATGTGAAATGCTTCT                                                >  SRR13385771.1211599/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                  AATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGGGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTT                                           >  SRR13385771.108419/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                   ATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTT                                          >  SRR13385771.308662/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                      ACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTA                                        <  SRR13385771.295678/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                       CTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACG                                                                                   <  SRR13385771.603161/256‑1 (MQ=60)
                                                                                                                                                                                                                                                                        TGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGA                                                                  >  SRR13385771.1197206/1‑272 (MQ=60)
                                                                                                                                                                                                                                                                          GTATCCCTATTGGTAGTTCGAAACTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGAAGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTCTTACC                                   >  SRR13385771.1729878/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                     ggtaggttggatCTTATGTGTCATAGGAGCTATCGGTGTGGGGCTATTTTTCTTGGTAGCAGGTCAGGTAGTTGTTTATGTCTTCTCTACACAAATCTTGT‑AATGGTTCAAGCACTACTGAGATGGCCGCGTTTTGGGATGCATCTGTAATGTGTTCACATTAAGGATGGTTTACAAGACTGGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGTTTACGTTGTGTATGATAATGGAGTTATGTGAAATGCTTCTTTTTGTGATTACCATATATAGAA                         <  SRR13385771.1268902/288‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                 CTTATGGGTCATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTATTACAATATATAGAAAATAGGTGTATAT            >  SRR13385771.675147/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                           ATAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑CTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTA  <  SRR13385771.337534/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                            
GACTGGCGGGTGCATGTTGCTGGGCCTTATTGATAATCGGGTTTTTAGGTTTCAATTTATGGGAAGATGGGACTACAAAGTCCATGCTGTTGGTCCGTGGAACGTCCATGCTAGGATTCATAGCCAATTTTTTAGCCTCTATTTTAACCTTCAAAGCATGGATCACCGACCATAAAGTAGCAACAATGAACGCTTCAGGGATGATTGTCGTCGTTTACATAATAAACGCCATTTTCTTATTCGTTTTCGTTATTTGTCAATTACTGGTATCCCTATTGGTAGTTCGAAACTTATGGGTCACAGGAGCTATCTTTTTGGGGCTATTTTTCTTTGTAGCAGGCCAGGTATTGGTTTATGCCTTCTCTACACAAAT‑TTGTGAAGGGTTCAAGCACTACTTAGATGGCCTCTTTTTTGGAAGCATCTGTAATGTGTTCACATTAATGATGGTTTACAAGACTTGGGATATGACTACCGACGACGACTTGGAATTTGGTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTCTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTA  >  BK006934/383944‑384543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑