Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATTTCTGCTCTTGCAGGATCTCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAAGGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATTTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTT  >  BK006939/337085‑337666
                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                             
ATTTCTGCTCTTGCAGGATCTCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGT                                                                                                                                                                                                                                                                                           >  SRR13385771.117049/1‑301 (MQ=60)
ATTTCTGCTCTTGCAGGATCTCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGT                                                                                                                                                                                                                                                                                           >  SRR13385771.391900/1‑301 (MQ=60)
ATTTCTGCTCTTGCAGGATCTCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATACTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGATTCAGCACCGGAGTGGATCTCTTTATCAATTACCGGGTTTGATATAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTCTTTAGTATACAACAATGGAATAGT                                                                                                                                                                                                                                                                                           >  SRR13385771.1229248/1‑301 (MQ=60)
  TTCTGCTCTTGCAGGATCTCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCCACATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCGGCAACGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTC                                                                                                                                                                                                                                                                                          <  SRR13385771.308340/300‑1 (MQ=60)
                   CTCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTT                                                                                                                                                                                                                                                                        >  SRR13385771.1438094/1‑301 (MQ=60)
                    TCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAA                                                                                                                                                                                                                                                                                      >  SRR13385771.1073978/1‑286 (MQ=60)
                     CCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTT                                                                                                                                                                                                                                                                         <  SRR13385771.388507/298‑1 (MQ=60)
                                     ACAGTATCCTGCTACTTAAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGGCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATGTACATCCGCCACCCTTGCATGGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTA                                                                                                                                                                                                                                                      <  SRR13385771.271389/301‑1 (MQ=60)
                                               GCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACG                                                                                                                                                                                                                                             <  SRR13385771.512870/300‑1 (MQ=60)
                                                        GCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATA                                                                                                                                                                                                                                   <  SRR13385771.1598532/301‑1 (MQ=60)
                                                                            TATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGAACTCAGCCACCCTTGCATTGCACACCGTCCAAACGCGGTCAAAGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATAACACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATAGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATGAAAcacaa                                                                                                                                                                                                                >  SRR13385771.1725307/1‑295 (MQ=60)
                                                                                       ATGTAATATGGTTCTTATCGGACTTTGTCAAAACCTTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCCCACAGTCCAAACGCGGTCAACGAGTCAGGACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATAAAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAA                                                                                                                                                                                                   <  SRR13385771.670558/301‑1 (MQ=60)
                                                                                                 GTCCTTATCGGACTTTGTCAAAACATTAGTCTCTAGAATGTGTGAATCCGCCATTGACATCCTCCACCCTTGCATTGCACACAGTCCAAACTCGGTCAACGAGTCATCACCGGTGTTGCTCTCTGTATCAATGACCGGGTTTTATAGAATTTGTCCCAGTGTTCTTTTTCTGGTTCTCTATATGTTATACAACAAGGGAATATGCAAAGTCCTAGTGATGTTATTAATCTGAAAACTACTATCGCGAACGAATAGTTATAATTAATCATTG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTAC                                                                                                                                                                                         <  SRR13385771.1446485/301‑1 (MQ=60)
                                                                                                 GGCCTTATCGGAGTTTGTCAAAACATTAGTCTCTAGAAGTTGTGAATCCTCCATGGACATCCGCCACCCTTTCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTGTTCTTTTTCTGGTTCTCTATATGTTATTCAACAATGGAATAGTCAAAATCCTAGTGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTAC                                                                                                                                                                                         <  SRR13385771.762133/301‑1 (MQ=60)
                                                                                                   CCTTTTCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAACCGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAA                                                                                                                                                                                       <  SRR13385771.207532/301‑1 (MQ=60)
                                                                                                                  TCAAAACATTAGGCTCTAGAATGTGTGAAGCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGTGTGGCTCTCTTGATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC                                                                                                                                                                         <  SRR13385771.1789394/300‑1 (MQ=60)
                                                                                                                        CATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGT                                                                                                                                                                  >  SRR13385771.1763665/1‑301 (MQ=60)
                                                                                                                        CATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCCCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACACCAACTAATATAAACTAATTGT                                                                                                                                                                  >  SRR13385771.154537/1‑301 (MQ=60)
                                                                                                                                     AATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTCGATAAC                                                                                                                                                        >  SRR13385771.694734/1‑298 (MQ=60)
                                                                                                                                     AATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTACTTTATAACAT                                                                                                                                                      >  SRR13385771.579305/1‑300 (MQ=60)
                                                                                                                                                                 CACCCTTTCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCGCTCTTTATCAATTACCGTTTTTGATAGAATTTGTCCCATTTTTCTTTGTCTTGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTATGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAG                                                                                                                         <  SRR13385771.1029919/301‑1 (MQ=60)
                                                                                                                                                                    CCTTGCATTGCACCCAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAG                                                                                                                      <  SRR13385771.1336150/301‑1 (MQ=60)
                                                                                                                                                                                                TCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTAT                                                                                                                                                                                                                                                     >  SRR13385771.1877119/1‑147 (MQ=60)
                                                                                                                                                                                                    GGAGTCAGCACCGGAATGGCTGTGTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAAAAATGGAATAGTCAGAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACA                                                                                      <  SRR13385771.576691/301‑1 (MQ=60)
                                                                                                                                                                                                                                TCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGACTTTTTTTTATTTATTTTTCAAGAACAAAACAGAAGTCTATATAATTAGCACTAT                                                          >  SRR13385771.30123/1‑301 (MQ=60)
                                                                                                                                                                                                                                     TACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑‑AAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTACAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATC                                                    >  SRR13385771.1145815/1‑301 (MQ=60)
                                                                                                                                                                                                                                        CGGGGTTGATAGAATTTTGCTCATTTTTGTTTTTCTGGTTCTCTATAGGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGGTATTAATCTGAAAACTACTATCTCGAACGAATAGTTAGAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTTTCCTTTATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACGATAATATCCA                                                  <  SRR13385771.1724484/301‑1 (MQ=60)
                                                                                                                                                                                                                                                 aagtATTTGTACCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAAAAATGGAATAGTAAAAATCCTAGGGATGTTATTAAACGGAAAACTAATAACTCGAAAGAATAGTTATAATTAATCAATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAAT                                          <  SRR13385771.248335/297‑1 (MQ=60)
                                                                                                                                                                                                                                                      TTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTTTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTACAGAAAAAAACAGAAGTCTATATACTTAGCACTATAATTACCAGTTTCAATTTGCTT                                    >  SRR13385771.768743/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                 TTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGATGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAATTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCC                         >  SRR13385771.603740/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                      TTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATGATTAATCTATG‑AAAAAAAAAAGAAAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACT                                                                   <  SRR13385771.841464/254‑1 (MQ=60)
                                                                                                                                                                                                                                                                         TCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGC                 >  SRR13385771.147500/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                           TGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGATTCCGAATTGGCTG               >  SRR13385771.1012519/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                        GTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTT  >  SRR13385771.887756/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                             
ATTTCTGCTCTTGCAGGATCTCCACTATTTTATTACCACAGTATTCTGCTACTTTAGCGCCACCATGACCATCGAATATACCGTAAAATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAAGGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATTTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTT  >  BK006939/337085‑337666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑