Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	6081	0.0	0	0.0%	0	0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCATCCCCTTCCATTTATCAGCATGATATTTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAAAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAGATTTTGATATATTAACATGACTAAAGGGCTATGGTCCATCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGATATTGACTCTCTAAAGCAATTACAGCAGCAAAATGACGATAGTTCCATA  >  BK006939/337449‑338026

AATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAA                                                                                                                                                                                                                                                                                      >  SRR13385771.1353967/1‑300 (MQ=60)

     AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTT                                                                                                                                                                                                                                                                                 >  SRR13385771.713054/1‑301 (MQ=60)

        tagtagaagatggtatatgatatgtaagtgtgactggagttcaacgtgtgctcttccgatctAACTTGTTGTAGTTTTATTCCGTGGGGTGGAGGGTGAATTTTTTTTATGTAGTTTTAAAGAACAAAACAGAAGTTTTTATACTTAGCACTAGAATATCCAGTTTTAATTTTCTCTGTCAGAATCCGAATTGGTTGGTTTTCTTTGTTTTACCAGCCTCTTCCATTTATTGGCATGATA‑‑TTTTTTTTTAGTATGGTCCTTTTTATTGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTT                                                                                                                                                                                                                                                                              <  SRR13385771.1398608/238‑1 (MQ=60)

                   AAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGCACTTGTTGTAGTTTTCTTCCGTGGGGAGGAGGGCGAATTTTTTTTCTTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATACTATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTCTCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTACAGGCATTA                                                                                                                                                                                                                                                                    >  SRR13385771.1694837/1‑300 (MQ=60)

                            ATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTACGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCCATCGTTGACGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACAC                                                                                                                                                                                                                                                            >  SRR13385771.1309245/1‑299 (MQ=60)

                                       ACTAATATACACTAATTGTCCTTGATCACAGAACTTGTTGTAGTTTTATTCCGAGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAACACAGAAGTATATATACTTAGCACTATAATATACAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTATTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGCAGTAGTTTGTGGGACAAGAAAAGTTGTTAAAGGAATAAACGTAAACAGTGATTTGCTG                                                                                                                                                                                                                                                >  SRR13385771.157517/1‑300 (MQ=60)

                                         TAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACC                                                                                                                                                                                                                                             >  SRR13385771.1852999/1‑301 (MQ=60)

                                           ATATACACTAATTGTCCTTGAGAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTAGATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTTGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCA                                                                                                                                                                                                                                           <  SRR13385771.384895/301‑1 (MQ=60)

                                             ATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATT                                                                                                                                                                                                                                         >  SRR13385771.1847922/1‑301 (MQ=60)

                                                   TAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑‑TTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTT                                                                                                                                                                                                                                  >  SRR13385771.1055198/1‑301 (MQ=60)

                                                    AATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTT                                                                                                                                                                                                                                  <  SRR13385771.1428914/301‑1 (MQ=60)

                                                          CCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACT                                                                                                                                                                                                                            <  SRR13385771.684345/301‑1 (MQ=60)

                                                                       ACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTG                                                                                                                                                                                                               <  SRR13385771.831659/301‑1 (MQ=60)

                                                                          TGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTT                                                                                                                                                                                                             <  SRR13385771.847634/300‑1 (MQ=60)

                                                                                                 AGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTT                                                                                                                                                                                                                                                                                 <  SRR13385771.2210/209‑1 (MQ=60)

                                                                                                                 TTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCG                                                                                                                                                                     >  SRR13385771.1389101/1‑301 (MQ=60)

                                                                                                                      TTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGT                                                                                                                                                                 <  SRR13385771.1568275/300‑1 (MQ=60)

                                                                                                                           TTTAAAGAACAAACCAGAAGTCTATATACTTAGCACTATAATCTCCAGTTTCAATTTGCTCTGTCAGCATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCCTTTATCAGCATGATATTTTTTTTTTTAGAATAATCCTTTCAATCGTTGCAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTAATTACGCTTTTTCAgatcggaagagcacccgtatgccctaccgtcacccttgcatctcgtatgacgtcttctgcttgac                                                                                                                                                             >  SRR13385771.213756/1‑235 (MQ=60)

                                                                                                                             TAAATAACAAAACAGAAGTCTATAGACTTAGCACTATAAGATCCAGTTTCAATTTGCGTTGGCAGAATCCTAATTGGCTGTTTTTGTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑GTTTTTTTTTATAATAATCCTTTCAATTGTTGAAGGAGTTTGTGGTAAAATAAAAGTTGTTAAAGTCATTAACGTACACAGTGATTTGCTGACTCAGTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATAGTAACATGTCTAAATGGCTATGTGCCGTCGTAGCAGAA                                                                                                                                                          <  SRR13385771.1863083/300‑1 (MQ=60)

                                                                                                                                                              CTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCG                                                                                                                        >  SRR13385771.132361/1‑301 (MQ=60)

                                                                                                                                                                              CAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGAT                                                                                                         >  SRR13385771.940364/1‑300 (MQ=60)

                                                                                                                                                                                ATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATT                                                                                                      >  SRR13385771.664567/1‑301 (MQ=60)

                                                                                                                                                                                            AGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAAGAATCCTTTCAATCGTTGAAGTAGTTTGTGGTAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTTCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGAGATATGAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAAGCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGTAAAA                                                                                          <  SRR13385771.1679874/301‑1 (MQ=60)

                                                                                                                                                                                              AATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTCAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAA                                                                                         >  SRR13385771.1392191/1‑300 (MQ=60)

                                                                                                                                                                                                        GGCTGTTTTTCTTTGTTTTACTATCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGGTTGTGGTAAAAGAAAAGTTGTTAAAGGCATTAACTTACACAGTTATGTGCTGGCTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCTATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAAT                                                                              <  SRR13385771.597738/301‑1 (MQ=60)

                                                                                                                                                                                                                      GTTTTACCCACACCTTGCATTTTTCAGCATGATA‑GTTTTGTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTGAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGAGTTGTCACTAATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATGATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATC                                                                 <  SRR13385771.269880/300‑1 (MQ=60)

                                                                                                                                                                                                                      GGTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATC                                                                 <  SRR13385771.66110/300‑1 (MQ=60)

                                                                                                                                                                                                                           ACCACCCCCTTCAATTAATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGGAGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGTCAATCATCACTTTAAAACCGAGGCCACAATCGAGAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAAT                                                            <  SRR13385771.434046/300‑1 (MQ=60)

                                                                                                                                                                                                                              ACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCA                                                         >  SRR13385771.1530622/1‑300 (MQ=60)

                                                                                                                                                                                                                                     TCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGAT                                                  >  SRR13385771.74568/1‑300 (MQ=60)

                                                                                                                                                                                                                                                   TGATA‑‑TTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGATATTGACTCTCTAAAGC                                  >  SRR13385771.1798667/1‑301 (MQ=60)

                                                                                                                                                                                                                                                                        TATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGATATTGACTCTCTAAAGCAATTACAGCAGCAAAATG                <  SRR13385771.47473/300‑1 (MQ=60)

                                                                                                                                                                                                                                                                           CCTTTCAATCGTTGAAGTAGTTTGTGGGAAAATAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTTTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGATATTGACTCTCTAAAGCAATTACAGCAGCAAAATGACGA            <  SRR13385771.488587/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                                    CGTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTGAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGATATTGACTCTCTAAAGCAATTACAGCAGCAAAATGACGATAGTTCCA    <  SRR13385771.1865994/300‑1 (MQ=60)

                                                                                                                                                                                                                                                                                     GTTGAAGTAGTTTGTGGGAAAAGAAAAGTTGTTACAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGTTTTTTCACTCATCGAAGTATTGTTAAATTTCGATATATTAACATGACTAAAGGGCTATGGTCCGTCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGATATTGACTCTCTAAAGCAATTACAGCAGCAAAATGACGATAGTTCCATA  <  SRR13385771.155922/301‑1 (MQ=60)

AATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACACTAATTGTCCTTGATAACAGAACTTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCATCCCCTTCCATTTATCAGCATGATATTTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAAAAAAGTTGTTAAAGGCATTAACGTACACAGTGATTTGCTGACTCATTACGATTTTTCACTCATCGAAGTATTGTTAGATTTTGATATATTAACATGACTAAAGGGCTATGGTCCATCGTAGCAGAAGGCAATCATCACTTTAAAACCGAGGCCACAATCGATAATTAGCACTGATATTCTGATTGGAAAAAAGGCAAAAAATGACCGCTTCCATCAAAATTCAACCGGATATTGACTCTCTAAAGCAATTACAGCAGCAAAATGACGATAGTTCCATA  >  BK006939/337449‑338026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`