Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCTTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAAAAATTGTGTGAAATCAACTGCATTTTTGGAAGCGAAAAAGATGATGAACCTGAGTTGAATGGCTGTGGGAAACCAATACTTGAC  >  BK006939/342268‑342833
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                     
aaaatattgaattctataaagaggggctgattctagtaaggatgggattctctatcccttatatggtattttttttttctttccgttttttcttgccTTTTTTTCTTTCCTTTTTTTCTTTCGCGGTTGGGAAACCTGGCTGGCTTCCCTTAAGTTCGTGCATCTTTCGCATTGGTTCCATATTCACATTCACAGTTCTCAATTGAGCGGAACGAGCTATGACTACCGCAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCT                                                                                                                                                                                                                                                                                                      <  SRR13385771.1155034/204‑1 (MQ=60)
           TACGTAAAAGAGAAAATAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATTTTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCGCCGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCAAATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGCACAATATTGGCCCTTTGCACGTTCG                                                                                                                                                                                                                                                                                           >  SRR13385771.720242/1‑301 (MQ=60)
            ACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATTTTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGC                                                                                                                                                                                                                                                                                          <  SRR13385771.1589196/301‑1 (MQ=60)
                  AAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATTTTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTTGGTAAAGTAGCTAGCTTCCTTTAAATTAGTGCTTCTATCGCATTTGTTCCATATTCACTTTCACAGTTCTTAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGGGATAGAGCGAAAGAGCGGCCATGACTGCGATGACGCTAGGTAAAAATATGTGCCCTTTGCACGTTCGCGACTA                                                                                                                                                                                                                                                                                     >  SRR13385771.526707/1‑300 (MQ=60)
                    GAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATTTTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAAC                                                                                                                                                                                                                                                                                  <  SRR13385771.1820671/301‑1 (MQ=60)
                             ATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATTTTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCAAAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGGTAGAGCGACAGAGCTGCCATGACTGCGATGCCTTTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGCCTAAACGAGTTagc                                                                                                                                                                                                                                                                          >  SRR13385771.590045/1‑297 (MQ=60)
                                     aaagatggaactatctatctcttatatagaattttttttttctttcctttttttctttccTTTTTTTCTTTCCTTTTTTTCTTGCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTC                                                                                                                                                                                                                                                                  <  SRR13385771.366594/240‑1 (MQ=60)
                                      aagatggaaatatctagcacttatatagaagtgtttgtttctttccttttgttctttccTTTTTTTCTTTCCTTTGTGTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCGATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCTAAAAATATTTGCCCTTTGCACTTTCGCGACTATACGAGTTCGATAGTAGTCCC                                                                                                                                                                                                                                                                <  SRR13385771.484325/242‑1 (MQ=60)
                                              aatatctatcacttatatagaattttttttttctttcctttttttctttccTTTTTTTCTTTCCTTTTTTTCTTTCTCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTTTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCCCCGTTTTTCGACCGGGCGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGG                                                                                                                                                                                                                                                        >  SRR13385771.1693324/52‑301 (MQ=60)
                                                     atcatttatatagaattttttttttctttcctttttttctttccTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGTGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTGGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTT                                                                                                                                                                                                                                                  <  SRR13385771.1494471/256‑1 (MQ=60)
                                                             tatagaattttttttttctttcctttttttctttccTTTTTTTATTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGTATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCGGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTAC                                                                                                                                                                                                                                          <  SRR13385771.1111390/264‑1 (MQ=60)
                                                                                       ttttctttccTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCCCAGTTTTTCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTCCCGGCCCACATTTTTTAACCTGACTCCG                                                                                                                                                                                                               >  SRR13385771.157979/11‑301 (MQ=60)
                                                                                              tccTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGCGATAGAGTGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTG                                                                                                                                                                                                         >  SRR13385771.798411/4‑300 (MQ=60)
                                                                                               ccTTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCAAAGTTCTCAATTGAGCAGAACGAGCTATGCCTACCACCGTTTTGCGACCGGGAGATAGAGCGCAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTCTTTTCCCTTTACCGGCCCACATTTTTCCACCTGACTCCGGTCCTGCC                                                                                                                                                                                                       >  SRR13385771.1548771/3‑301 (MQ=60)
                                                                                                   TTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTA                                                                                                                                                                                                    <  SRR13385771.1183752/300‑1 (MQ=60)
                                                                                                      TTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGATAGCTTCCCTTAAATTAGTGCATCTCTCGCCTTTGTTCCACCTTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTCGCGAAAAATATTGGCCCTTTGTCCGTCCGCGACTCAACGAGTTCGATCGTAGACCCGTGTCTGGTTTTTTACCTCTACCGGCCCACCTTTTTTCACCTGACTCCGGACCTGTCGTACGAC                                                                                                                                                                                                >  SRR13385771.456990/1‑301 (MQ=60)
                                                                                                        CTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACAGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTC                                                                                                                                                                                              >  SRR13385771.775191/1‑301 (MQ=60)
                                                                                                          TTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTG                                                                                                                                                                                            >  SRR13385771.444865/1‑301 (MQ=60)
                                                                                                                       TTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACC                                                                                                                                                                               >  SRR13385771.520524/1‑301 (MQ=60)
                                                                                                                         CGCTGTTGGGAAAACTAGCTCGCTTTCATTAAATTGTTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTG                                                                                                                                                                             <  SRR13385771.370048/301‑1 (MQ=60)
                                                                                                                         CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCTCAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTG                                                                                                                                                                             <  SRR13385771.1731403/301‑1 (MQ=60)
                                                                                                                                    AAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATGTTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGCCTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCT                                                                                                                                                                  <  SRR13385771.444083/301‑1 (MQ=60)
                                                                                                                                               CTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTAC                                                                                                                                                       >  SRR13385771.566831/1‑301 (MQ=60)
                                                                                                                                                       AAATTAGGGCATCTATCGCATTTTTTCCATATTCACATTCACAGTTCTGATTTGAGCAGAACGAGTTATGACTAGTACAGTGGTGCGACCGGGAGATAGAGCTAAAGAGCTGCCATGAGTGCGAGTACTCTAGCTAAAAATGTTGGCCCTTTGCACGTTCGCTACTAAACGAGTTCGATAGTAGTCCCGTGTCTGGTTTTTTCCCTTTTCCGGCCCGCTTTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGGAATG                                                                                                                                               <  SRR13385771.1644433/301‑1 (MQ=60)
                                                                                                                                                           TAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTTGGGCTTTTACTAGTAATGTGC                                                                                                                                            >  SRR13385771.586553/1‑300 (MQ=60)
                                                                                                                                                            AGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCAC                                                                                                                                          >  SRR13385771.715771/1‑301 (MQ=60)
                                                                                                                                                                     ATCGCATTTGTTCCATATTCACATTCCCAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATG                                                                                                                                    <  SRR13385771.1806897/298‑1 (MQ=60)
                                                                                                                                                                     AGCGCATTTGTTCCATATTCACATGCACAGTGCTCAATGGAGCAGAACGAGCTAGTACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGGTGCCATGACTGCGAGGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCTGCCCACATTTTGTCACCTGACTCCGGTCCTGACGTACGACTCTGGTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGT                                                                                                                                   <  SRR13385771.1351727/299‑1 (MQ=60)
                                                                                                                                                                              GTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGT                                                                                                                        >  SRR13385771.619294/1‑301 (MQ=60)
                                                                                                                                                                                TCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGACCGAGCTGCCATGACTGCGATGACTCTAGCGAACAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGACCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGCAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGCTGGTCC                                                                                                                      >  SRR13385771.340887/1‑301 (MQ=60)
                                                                                                                                                                                   ATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCTCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTTGTAATGTGTACGTGATCTGGCGTGATGGGCCTTT                                                                                                                   >  SRR13385771.49108/1‑301 (MQ=60)
                                                                                                                                                                                           ATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTTTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCGG                                                                                                             >  SRR13385771.841369/1‑299 (MQ=60)
                                                                                                                                                                                                       CAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTG                                                                                               <  SRR13385771.1385171/301‑1 (MQ=60)
                                                                                                                                                                                                        AATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATATTAGTCCCGTTTCTGGCTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAA                                                                                                                                                                                     >  SRR13385771.662383/1‑214 (MQ=60)
                                                                                                                                                                                                                      AGCTATGACTACCACAGTTTTGCGACCTGGAAATAGATCGAAAGATCTTCCATGACTGCGATGACTCTAGCGAAAAATATTTGCCCTTTGCACGTTCGCTACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCGCCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACTTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCTGAGTGCGGGACCCTGGTTCATGAAAAAT                                                                                  <  SRR13385771.801766/299‑1 (MQ=60)
                                                                                                                                                                                                                       GCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACAGGCCCACATTTTTTCACCTGAATCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTACTGTGGCTTTTACTAGTAATGTGCAAGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGAGGGACCCTGGTTCCTGAAAAATTGT                                                                               >  SRR13385771.1164203/1‑301 (MQ=60)
                                                                                                                                                                                                                                                CGGGAAATAGAGCGAAAGGGCTGCCATGACTGCAATGACTCTAGCGAAAAATATTGGCCCTTTGCAAGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGACCAACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTAGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAAAAATTGTGTGAAATCAACTGCATTTTTGGAAG                                                      <  SRR13385771.461359/301‑1 (MQ=60)
                                                                                                                                                                                                                                                  GGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCTACTAAACGAGTTCGAGAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAGTATTTCCTGTGGCTTTTACGAGGAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAACAATTGTGTGAAATCAACTGCATTTTTGGAAGCG                                                    >  SRR13385771.182305/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                     TGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTCAGTCACGTGAAATATTTCCTGCGGCTTTTACTAGTAAGGTGCCCGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAAAAATTGTGTGAAATCAACTGCCTTTTTGGAAGCGAAAAAGATGATGAACCCG                                  >  SRR13385771.860678/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                           GACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCAGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGCTGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAAAAATTGTGTGAAATCAACTGCATTTTTGGAAGCGACAAAGATGATGAACCTGAGTTGA                            >  SRR13385771.658800/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                             GAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAAAAATTGTGTGAAATCAACTGCATTTTTGGAAGCGAAAAAGATGATGAACCTGAGTTGAATGGCTGTGGGAAACCAAT         >  SRR13385771.1795078/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                              AAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTGCGATAGTAGTCCCGTTGCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCGGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAAAAATTGTGTGAAAGCAACTTCATTTTTGGAAGCGAAAAAGATGATGAACCTGAGTTGAATGGCTGTGGGAAACCAATA        <  SRR13385771.1832438/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                     TTTGCCCTTTGCACGTTAGCGACTAAACGAGTTCTATAGTATTCCCGTTTCTTTTTTTTTCCCTTTACCGGCCCACGTTTTTTCACCTGACTCCGGTCCTGACGTACTACTCTGGTTTTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATTTGCACGTGAGGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACGCTGGTTCATGAAAAATTGGGTGAAATCAACTGCATTTTTGGAAGCGAAAAAGATGATGAACCTGAGTTGAATGGCTGTGGGAAACCAATACTTGAC  <  SRR13385771.1820871/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                     
AAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTCTTTCCTTTTTTTCTTTCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCTTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGGTCCTGACGTACGACTCTGTTTGTAAGTCACGTGAAATATTTCCTGTGGCTTTTACTAGTAATGTGCACGTGATGTGGCGTGATGGTCCTTTACCCGGAGTGCGGGACCCTGGTTCATGAAAAATTGTGTGAAATCAACTGCATTTTTGGAAGCGAAAAAGATGATGAACCTGAGTTGAATGGCTGTGGGAAACCAATACTTGAC  >  BK006939/342268‑342833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑