Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGGATACACTTCTTTATACCATCAATCACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTACAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCTCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACA  >  BK006942/328259‑328831
                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                 
GGGATACACTTCTTTATACCATCAATCACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACTGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGAGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACC                                                                                                                                                                                                                                                                                   >  SRR13385771.745964/1‑300 (MQ=60)
            TTTATACCATCAATCACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCG                                                                                                                                                                                                                                                                      >  SRR13385771.309950/1‑301 (MQ=60)
                 ACCATCAATCACAGAAGGCCAAATTTTGTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAG                                                                                                                                                                                                                                                                 <  SRR13385771.227002/301‑1 (MQ=60)
                          CACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTTATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCC                                                                                                                                                                                                                                                        <  SRR13385771.1455951/301‑1 (MQ=60)
                                     AAATTTTGTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAG                                                                                                                                                                                                                                             <  SRR13385771.432357/301‑1 (MQ=60)
                                         gttgtgGATGTAGGTTAGGTAGAATCCCACAAACAGTGCGGCAAGGTTAAAGCAAACGAAAACCCATTCAAAACCAAAGTTTCTCCATCTGTGATGATAACTCAGATTGTCTGGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGTCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGTAGGTTTGACCCATTATAGGTTGGCGTGGTACCATTTCACGTGTCGAGCATTTTACTTCCCTGTCATGGAGAAG                                                                                                                                                                                                                                          <  SRR13385771.1770917/294‑1 (MQ=60)
                                           TTTTGATGTAGGTTAGGTAGAAGCCCACAAACAGTGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATGTCGCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTA                                                                                                                                                                                                                                        <  SRR13385771.1352172/300‑1 (MQ=60)
                                            TTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAA                                                                                                                                                                                                                                       <  SRR13385771.191941/300‑1 (MQ=60)
                                                    AGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTTACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGATAAGTAAGCTTACGA                                                                                                                                                                                                                               >  SRR13385771.908664/1‑300 (MQ=60)
                                                               AAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATCTTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGA                                                                                                                                                                                                                   <  SRR13385771.1854843/301‑1 (MQ=60)
                                                                           ATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATG                                                                                                                                                                                                       <  SRR13385771.1683289/301‑1 (MQ=60)
                                                                                  CAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGGGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCGTACGAAAGTTTCAATGAAATACGTGTATGGTGAAAC                                                                                                                                                                                                <  SRR13385771.1508375/301‑1 (MQ=60)
                                                                                        TAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGT                                                                                                                                                                                           <  SRR13385771.1674078/300‑1 (MQ=60)
                                                                                        TAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGT                                                                                                                                                                                           <  SRR13385771.1180375/300‑1 (MQ=60)
                                                                                             CAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATCCGGTTATGGTGAAACCCTGTACATC                                                                                                                                                                                      >  SRR13385771.1302644/1‑300 (MQ=60)
                                                                                             CAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATG                                                                                                                                                                                      >  SRR13385771.1285397/1‑300 (MQ=60)
                                                                                                           TTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTT                                                                                                                                                                       >  SRR13385771.173972/1‑301 (MQ=60)
                                                                                                                                            ACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCAC                                                                                                                                        >  SRR13385771.1454071/1‑299 (MQ=60)
                                                                                                                                               CATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAAT                                                                                                                                   <  SRR13385771.34705/301‑1 (MQ=60)
                                                                                                                                                  ATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGA                                                                                                                                 <  SRR13385771.120743/300‑1 (MQ=60)
                                                                                                                                                                          CCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCA                                                                                                        <  SRR13385771.1618969/301‑1 (MQ=60)
                                                                                                                                                                                          AAGTAGGAGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAG                                                                                        <  SRR13385771.966471/301‑1 (MQ=60)
                                                                                                                                                                                                  GCAGACTGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAA                                                                                <  SRR13385771.1142026/301‑1 (MQ=60)
                                                                                                                                                                                                   CAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAACGACAGCGGCAGTTCGTAAA                                                                                >  SRR13385771.189103/1‑300 (MQ=60)
                                                                                                                                                                                                    AGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACAATTTCACTTGTCGAGCAGTTTACTTCCCTGTGATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATCCGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAAGGCGACAGAAGGAAGCTGTGAAACTATAGAGGCAGGCAAGAAAGCAAGCGGCGGTTTGTAAAcg                                                                              >  SRR13385771.370404/1‑299 (MQ=60)
                                                                                                                                                                                                        GGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGGCCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAGTACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGGATGGAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGG                                                                          <  SRR13385771.842686/301‑1 (MQ=60)
                                                                                                                                                                                                                    ATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATAT                                                                 >  SRR13385771.1423664/1‑298 (MQ=60)
                                                                                                                                                                                                                           TGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGT                                                                                                                                                          <  SRR13385771.370395/202‑1 (MQ=60)
                                                                                                                                                                                                                                  TCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAA                                                 >  SRR13385771.1567554/1‑300 (MQ=60)
                                                                                                                                                                                                                                               ATCAATAAAGGGTTTCATAAACTGACCGCAGGTGTGACCCAGTATAGGTTGGCTGGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCGTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGGTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATAC                                   <  SRR13385771.656652/301‑1 (MQ=60)
                                                                                                                                                                                                                                                            TTCATAAACTGACCGCAGGTTTGACCCATCATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGACTGTCCAAAATCTTGGGAATAACGAGTATGGTCGCATAACGCCACAGAATGAAGCTGTGACACTATACAGGAAGGCAACAAAGACAGCGGCAGCTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATACA                       >  SRR13385771.1462881/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                 AAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAAGGACAAATAATACATGGAAAATAAAATATA                  >  SRR13385771.420449/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                   ACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATT               <  SRR13385771.1668964/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                    CTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGTGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAAGAAAATATAATTC              >  SRR13385771.154016/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                      GACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCA             <  SRR13385771.790635/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                          GCAGGTTTGACCCATCATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGCAGCCACAACCCAAATGACAAATAATACACGGCACAGAAAATATAATTCAAGTA         >  SRR13385771.49244/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                 TGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACA  <  SRR13385771.1509551/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                 
GGGATACACTTCTTTATACCATCAATCACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTACAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCTCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACA  >  BK006942/328259‑328831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑