Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTACAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCTCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACACCAGCTACACGGGCAGAGGTTTCGAAACCGCAACAGAAGTAGCAAC  >  BK006942/328285‑328877
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                    
CACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTTATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCC                                                                                                                                                                                                                                                                                                      <  SRR13385771.1455951/301‑1 (MQ=60)
           AAATTTTGTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAG                                                                                                                                                                                                                                                                                           <  SRR13385771.432357/301‑1 (MQ=60)
               gttgtgGATGTAGGTTAGGTAGAATCCCACAAACAGTGCGGCAAGGTTAAAGCAAACGAAAACCCATTCAAAACCAAAGTTTCTCCATCTGTGATGATAACTCAGATTGTCTGGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGTCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGTAGGTTTGACCCATTATAGGTTGGCGTGGTACCATTTCACGTGTCGAGCATTTTACTTCCCTGTCATGGAGAAG                                                                                                                                                                                                                                                                                        <  SRR13385771.1770917/294‑1 (MQ=60)
                 TTTTGATGTAGGTTAGGTAGAAGCCCACAAACAGTGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATGTCGCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTA                                                                                                                                                                                                                                                                                      <  SRR13385771.1352172/300‑1 (MQ=60)
                  TTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAA                                                                                                                                                                                                                                                                                     <  SRR13385771.191941/300‑1 (MQ=60)
                          AGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTTACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGATAAGTAAGCTTACGA                                                                                                                                                                                                                                                                             >  SRR13385771.908664/1‑300 (MQ=60)
                                     AAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATCTTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGA                                                                                                                                                                                                                                                                 <  SRR13385771.1854843/301‑1 (MQ=60)
                                                 ATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATG                                                                                                                                                                                                                                                     <  SRR13385771.1683289/301‑1 (MQ=60)
                                                        CAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGGGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCGTACGAAAGTTTCAATGAAATACGTGTATGGTGAAAC                                                                                                                                                                                                                                              <  SRR13385771.1508375/301‑1 (MQ=60)
                                                              TAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGT                                                                                                                                                                                                                                         <  SRR13385771.1180375/300‑1 (MQ=60)
                                                              TAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGT                                                                                                                                                                                                                                         <  SRR13385771.1674078/300‑1 (MQ=60)
                                                                   CAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATCCGGTTATGGTGAAACCCTGTACATC                                                                                                                                                                                                                                    >  SRR13385771.1302644/1‑300 (MQ=60)
                                                                   CAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATG                                                                                                                                                                                                                                    >  SRR13385771.1285397/1‑300 (MQ=60)
                                                                                 TTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTT                                                                                                                                                                                                                     >  SRR13385771.173972/1‑301 (MQ=60)
                                                                                                                  ACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCAC                                                                                                                                                                                      >  SRR13385771.1454071/1‑299 (MQ=60)
                                                                                                                     CATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAAT                                                                                                                                                                                 <  SRR13385771.34705/301‑1 (MQ=60)
                                                                                                                        ATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGA                                                                                                                                                                               <  SRR13385771.120743/300‑1 (MQ=60)
                                                                                                                                                CCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCA                                                                                                                                                      <  SRR13385771.1618969/301‑1 (MQ=60)
                                                                                                                                                                AAGTAGGAGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAG                                                                                                                                      <  SRR13385771.966471/301‑1 (MQ=60)
                                                                                                                                                                        GCAGACTGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAA                                                                                                                              <  SRR13385771.1142026/301‑1 (MQ=60)
                                                                                                                                                                         CAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAACGACAGCGGCAGTTCGTAAA                                                                                                                              >  SRR13385771.189103/1‑300 (MQ=60)
                                                                                                                                                                          AGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACAATTTCACTTGTCGAGCAGTTTACTTCCCTGTGATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATCCGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAAGGCGACAGAAGGAAGCTGTGAAACTATAGAGGCAGGCAAGAAAGCAAGCGGCGGTTTGTAAAcg                                                                                                                            >  SRR13385771.370404/1‑299 (MQ=60)
                                                                                                                                                                              GGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGGCCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAGTACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGGATGGAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGG                                                                                                                        <  SRR13385771.842686/301‑1 (MQ=60)
                                                                                                                                                                                          ATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATAT                                                                                                               >  SRR13385771.1423664/1‑298 (MQ=60)
                                                                                                                                                                                                 TGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGT                                                                                                                                                                                                        <  SRR13385771.370395/202‑1 (MQ=60)
                                                                                                                                                                                                        TCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAA                                                                                               >  SRR13385771.1567554/1‑300 (MQ=60)
                                                                                                                                                                                                                     ATCAATAAAGGGTTTCATAAACTGACCGCAGGTGTGACCCAGTATAGGTTGGCTGGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCGTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGGTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATAC                                                                                 <  SRR13385771.656652/301‑1 (MQ=60)
                                                                                                                                                                                                                                  TTCATAAACTGACCGCAGGTTTGACCCATCATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGACTGTCCAAAATCTTGGGAATAACGAGTATGGTCGCATAACGCCACAGAATGAAGCTGTGACACTATACAGGAAGGCAACAAAGACAGCGGCAGCTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATACA                                                                     >  SRR13385771.1462881/1‑300 (MQ=60)
                                                                                                                                                                                                                                       AAACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAAGGACAAATAATACATGGAAAATAAAATATA                                                                >  SRR13385771.420449/1‑300 (MQ=60)
                                                                                                                                                                                                                                         ACTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATT                                                             <  SRR13385771.1668964/301‑1 (MQ=60)
                                                                                                                                                                                                                                          CTGACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGTGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAAGAAAATATAATTC                                                            >  SRR13385771.154016/1‑301 (MQ=60)
                                                                                                                                                                                                                                            GACCGCAGGTTTGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCA                                                           <  SRR13385771.790635/300‑1 (MQ=60)
                                                                                                                                                                                                                                                GCAGGTTTGACCCATCATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGCAGCCACAACCCAAATGACAAATAATACACGGCACAGAAAATATAATTCAAGTA                                                       >  SRR13385771.49244/1‑300 (MQ=60)
                                                                                                                                                                                                                                                       TGACCCATTATAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACA                                                <  SRR13385771.1509551/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                  AGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGA                                                                                                                                                                               <  SRR13385771.639082/162‑1 (MQ=60)
                                                                                                                                                                                                                                                                                      CACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACACCAGCTACACGGGCAGAGGTTTCGAAACCGCA                <  SRR13385771.710296/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                      CACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCA                                                                                                                                                                                       >  SRR13385771.1144822/1‑134 (MQ=60)
                                                                                                                                                                                                                                                                                      CACTTGTCGAGCAGTTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTAAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACACCAGCTACACGGGCAGAGGTTTCGAAACCGCA                <  SRR13385771.898336/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                    TTTACTTCCCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACACTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACACCAGCTACAAGGGCAGAGGTTTCGAAACCGCAACAGAAGTAGCAAC  >  SRR13385771.427833/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                    
CACAGAAGGCCAAATTTTTTTGATGTAGGTTAGGTAGAAGCCCACAAACATGGCGGCAATGTTAAAGCAAACGAAAACCCATTCAAAACCAAAATTTCTCCATCTGTGATGATAACTCATATTTTCTTGAGCAAGGAAGTCATCCCCAACAGTGTACATGCAGTAGGCGCAGACGGTGTATGTGTTATTGATGTGCAGTTTCCCACCAAATTCATCAATAAAGGGTTTCATAAACTGACCGCAGGTTTGACCCATTACAGGTTGGCTTGGTACCATTTCACTTGTCGAGCAGTTTACTTCTCTGTCATGGAGAAGTAAGCTTACGAAAGTTTCAATGAAATACGTGTATGGTGAAACCCTGTACATGAATGTCCAAAATCTTGGGAATAACGAGTATGGTTGCATAACGCCACAGAATGAAGCTGTGAAACTATAGAGGAAGGCAACAAAGACAGCGGCAGTTTGTAAATCGGGGGCAGAATATAGAAGCCACAACCCAAATGACAAATAATACATGGAAAATAAAATATAATTCAAGTAAAAGACACCAGCTACACGGGCAGAGGTTTCGAAACCGCAACAGAAGTAGCAAC  >  BK006942/328285‑328877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑