Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	6081	0.0	0	0.0%	0	0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGATAAATGGCACTTTTCGCACACCCGTTGTTTTATCTCCGATAGTACGTGGGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCTAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTTTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCAGTGACAAATCCGACATACAAGATACAACTGGTG  >  BK006945/341628‑342223

AGATAAATGGCACTTTTCGCACACCCGTTGTTTTATCTCCGATAGTACGTGGGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCG                                                                                                                                                                                                                                                                                                           >  SRR13385771.336233/1‑299 (MQ=60)

AGATAAATGGCACTTTTCGCACACCCGTTGTTTTATCTCCGATAGTACGTGGGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTACCGTAACGGGTAATAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAG                                                                                                                                                                                                                                                                                                         <  SRR13385771.180796/301‑1 (MQ=60)

          CACTTTTCGCACACCCGTTGTTTTATCTCCGATAGTACGTGGGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCC                                                                                                                                                                                                                                                                                               >  SRR13385771.265512/1‑301 (MQ=60)

                     CACCCGTTGTTTTATCTCCGATAGTACGTGGGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGG                                                                                                                                                                                                                                                                                    >  SRR13385771.1434620/1‑301 (MQ=60)

                                      ccgagattactttggccgTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTTAGCAGGTATTTAAAAGATAGGACTGTAAACAAGCACATGATCTGTGTCTAAAAAAAGTAGCTAAGAGAAAAATTAGTAGGATAGTATGAACAGGAAATGAGCTAGCGTAACGGGTACTAATAGTAATCTTGGTCTTAACATTGTGTTCCGTCTTATTGTAACTTATGACACCAATTGCATATTGACCATTGTGGTGACTTCGAGAACGTTTCCTCTAGTGCATTATTTGATTAACCAGAT                                                                                                                                                                                                                                                                     <  SRR13385771.1729602/281‑1 (MQ=60)

                                                   GGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAA                                                                                                                                                                                                                                                      <  SRR13385771.410901/301‑1 (MQ=60)

                                                    GCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAAC                                                                                                                                                                                                                                                     <  SRR13385771.11441/301‑1 (MQ=60)

                                                        TTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAA                                                                                                                                                                                                                                                   <  SRR13385771.1389695/299‑1 (MQ=60)

                                                              ATGGTCTTTTAACGAAAGAACGGCATCTTGAAGTGAGCAGGTATTTAAAAGATAGGACGAGAAACATGCACATGAGCTGTGTCGAAAAAAAGTAGCAGAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGC                                                                                                                                                                                                                                            <  SRR13385771.424916/300‑1 (MQ=60)

                                                              ATGGTCGGTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCGGTGGCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTAGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGC                                                                                                                                                                                                                                            <  SRR13385771.834612/300‑1 (MQ=60)

                                                                   CGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGAGAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGGGACTTCGAGAACGCCTCCTCGAGTGCAGGAGGGGATTAACCAGATTAAAGATCTCTCTAACAAATCATGCCGTGT                                                                                                                                                                                                                                       >  SRR13385771.50063/1‑300 (MQ=60)

                                                                           GAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAAAATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAACGATTTCTACAACAAATCAGGCAGAGTAGAGGATTT                                                                                                                                                                                                                              >  SRR13385771.339605/1‑301 (MQ=60)

                                                                                           GAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGAT                                                                                                                                                                                                              >  SRR13385771.1189925/1‑301 (MQ=60)

                                                                                               TGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATC                                                                                                                                                                                                          >  SRR13385771.593942/1‑301 (MQ=60)

                                                                                                GAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCATCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGCGGATTTGGAAATAGACTTTGATTATCT                                                                                                                                                                                                         >  SRR13385771.1230725/1‑301 (MQ=60)

                                                                                                 GGCAGGTATTTAAAAGATAGGAAGAGAAACAAGCACATGAGCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTG                                                                                                                                                                                                        <  SRR13385771.1067693/301‑1 (MQ=60)

                                                                                                    AGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAAATGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTG                                                                                                                                                                                                     <  SRR13385771.992509/301‑1 (MQ=60)

                                                                                                          TTAAAAGATAGGACGAGAAACAAGCACATGATCTGTATCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTCGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGCGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGAGTAGAGGATTTGGAAATAGACTTTGATTATCTGCTGGTGGAC                                                                                                                                                                                               >  SRR13385771.1497657/1‑301 (MQ=60)

                                                                                                                GATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGATGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGGACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACC                                                                                                                                                                                         <  SRR13385771.1179211/301‑1 (MQ=60)

                                                                                                                              CAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATGGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGT                                                                                                                                                                           >  SRR13385771.1777858/1‑301 (MQ=60)

                                                                                                                                    CATCATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATATGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAA                                                                                                                                                                     <  SRR13385771.1223198/301‑1 (MQ=60)

                                                                                                                                        ATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGC                                                                                                                                                                  >  SRR13385771.993881/1‑300 (MQ=60)

                                                                                                                                            GTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATT                                                                                                                                                             >  SRR13385771.1326668/1‑301 (MQ=60)

                                                                                                                                             TGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTGGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATT                                                                                                                                                             >  SRR13385771.743846/1‑300 (MQ=60)

                                                                                                                                                          TAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATATGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAA                                                                                                                                                >  SRR13385771.1472251/1‑300 (MQ=60)

                                                                                                                                                                   GAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGG                                                                                                                                      <  SRR13385771.786264/301‑1 (MQ=60)

                                                                                                                                                                                   AGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGAGTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTT                                                                                                                      >  SRR13385771.998322/1‑301 (MQ=60)

                                                                                                                                                                                                          CGTAACGGGTACTAATAGTAAGCTTGGGCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACGCCAATGTCAGATTGACCAGTGTGGTGACGTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGAGTTCTACAACAAATCAGGCCGTGTAGATGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATTGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGAGAAACTACCTGTTCGTGAATGCTGCGCAAGGTAT                                                                                                <  SRR13385771.661844/300‑1 (MQ=60)

                                                                                                                                                                                                           GTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGGCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCT                                                                                              <  SRR13385771.218565/301‑1 (MQ=60)

                                                                                                                                                                                                                       AATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACT                                                                                                                            <  SRR13385771.1211904/259‑1 (MQ=60)

                                                                                                                                                                                                                          AGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATT                                                                               >  SRR13385771.1400628/1‑301 (MQ=60)

                                                                                                                                                                                                                           GTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGATGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTG                                                                              >  SRR13385771.193965/1‑301 (MQ=60)

                                                                                                                                                                                                                               TCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCCGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGCTTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGT                                                                                                                                                                             >  SRR13385771.1130720/1‑202 (MQ=60)

                                                                                                                                                                                                                                                                                             TTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGCTTTCTACAACAAATCAGGCCGTGTAGCGGCTTTGGAAATAGACTTTGATTATCTGTTGGTGCACTTCCCCAACATGGTGCGTGTCTTGAACGCATCTTACGCCATCAACAAAAAGTACAGGGCGCTAAACTCCCTTTTCGTGAATGCTGCGCAAGGTCTATTTGACGGTATAGCTTGGACCGGCGCGGTCAAGGAGGTTTACACCAATCCATTGGAGGCGGTGACAAATCAGACATACCAGA             >  SRR13385771.1306812/1‑300 (MQ=60)

                                                                                                                                                                                                                                                                                                       TTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTG  >  SRR13385771.735242/1‑301 (MQ=60)

AGATAAATGGCACTTTTCGCACACCCGTTGTTTTATCTCCGATAGTACGTGGGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCTAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTTTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCAGTGACAAATCCGACATACAAGATACAACTGGTG  >  BK006945/341628‑342223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`