Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCTAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTTTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCAGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCC  >  BK006945/341679‑342265
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                   
GGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAA                                                                                                                                                                                                                                                                                                <  SRR13385771.410901/301‑1 (MQ=60)
 GCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAAC                                                                                                                                                                                                                                                                                               <  SRR13385771.11441/301‑1 (MQ=60)
     TTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAA                                                                                                                                                                                                                                                                                             <  SRR13385771.1389695/299‑1 (MQ=60)
           ATGGTCTTTTAACGAAAGAACGGCATCTTGAAGTGAGCAGGTATTTAAAAGATAGGACGAGAAACATGCACATGAGCTGTGTCGAAAAAAAGTAGCAGAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGC                                                                                                                                                                                                                                                                                      <  SRR13385771.424916/300‑1 (MQ=60)
           ATGGTCGGTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCGGTGGCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTAGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGC                                                                                                                                                                                                                                                                                      <  SRR13385771.834612/300‑1 (MQ=60)
                CGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGAGAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGGGACTTCGAGAACGCCTCCTCGAGTGCAGGAGGGGATTAACCAGATTAAAGATCTCTCTAACAAATCATGCCGTGT                                                                                                                                                                                                                                                                                 >  SRR13385771.50063/1‑300 (MQ=60)
                        GAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAAAATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAACGATTTCTACAACAAATCAGGCAGAGTAGAGGATTT                                                                                                                                                                                                                                                                        >  SRR13385771.339605/1‑301 (MQ=60)
                                        GAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGAT                                                                                                                                                                                                                                                        >  SRR13385771.1189925/1‑301 (MQ=60)
                                            TGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATC                                                                                                                                                                                                                                                    >  SRR13385771.593942/1‑301 (MQ=60)
                                             GAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCATCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGCGGATTTGGAAATAGACTTTGATTATCT                                                                                                                                                                                                                                                   >  SRR13385771.1230725/1‑301 (MQ=60)
                                              GGCAGGTATTTAAAAGATAGGAAGAGAAACAAGCACATGAGCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTG                                                                                                                                                                                                                                                  <  SRR13385771.1067693/301‑1 (MQ=60)
                                                 AGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAAATGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTG                                                                                                                                                                                                                                               <  SRR13385771.992509/301‑1 (MQ=60)
                                                       TTAAAAGATAGGACGAGAAACAAGCACATGATCTGTATCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTCGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGCGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGAGTAGAGGATTTGGAAATAGACTTTGATTATCTGCTGGTGGAC                                                                                                                                                                                                                                         >  SRR13385771.1497657/1‑301 (MQ=60)
                                                             GATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGATGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGGACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACC                                                                                                                                                                                                                                   <  SRR13385771.1179211/301‑1 (MQ=60)
                                                                           CAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATGGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGT                                                                                                                                                                                                                     >  SRR13385771.1777858/1‑301 (MQ=60)
                                                                                 CATCATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATATGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAA                                                                                                                                                                                                               <  SRR13385771.1223198/301‑1 (MQ=60)
                                                                                     ATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGC                                                                                                                                                                                                            >  SRR13385771.993881/1‑300 (MQ=60)
                                                                                         GTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATT                                                                                                                                                                                                       >  SRR13385771.1326668/1‑301 (MQ=60)
                                                                                          TGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTGGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATT                                                                                                                                                                                                       >  SRR13385771.743846/1‑300 (MQ=60)
                                                                                                       TAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATATGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAA                                                                                                                                                                                          >  SRR13385771.1472251/1‑300 (MQ=60)
                                                                                                                GAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGG                                                                                                                                                                                <  SRR13385771.786264/301‑1 (MQ=60)
                                                                                                                                AGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGAGTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTT                                                                                                                                                                >  SRR13385771.998322/1‑301 (MQ=60)
                                                                                                                                                       CGTAACGGGTACTAATAGTAAGCTTGGGCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACGCCAATGTCAGATTGACCAGTGTGGTGACGTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGAGTTCTACAACAAATCAGGCCGTGTAGATGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATTGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGAGAAACTACCTGTTCGTGAATGCTGCGCAAGGTAT                                                                                                                                          <  SRR13385771.661844/300‑1 (MQ=60)
                                                                                                                                                        GTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGGCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCT                                                                                                                                        <  SRR13385771.218565/301‑1 (MQ=60)
                                                                                                                                                                    AATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACT                                                                                                                                                                      <  SRR13385771.1211904/259‑1 (MQ=60)
                                                                                                                                                                       AGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATT                                                                                                                         >  SRR13385771.1400628/1‑301 (MQ=60)
                                                                                                                                                                        GTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGATGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTG                                                                                                                        >  SRR13385771.193965/1‑301 (MQ=60)
                                                                                                                                                                            TCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCCGATTGACCATTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGCTTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGT                                                                                                                                                                                                                       >  SRR13385771.1130720/1‑202 (MQ=60)
                                                                                                                                                                                                                                          TTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGCTTTCTACAACAAATCAGGCCGTGTAGCGGCTTTGGAAATAGACTTTGATTATCTGTTGGTGCACTTCCCCAACATGGTGCGTGTCTTGAACGCATCTTACGCCATCAACAAAAAGTACAGGGCGCTAAACTCCCTTTTCGTGAATGCTGCGCAAGGTCTATTTGACGGTATAGCTTGGACCGGCGCGGTCAAGGAGGTTTACACCAATCCATTGGAGGCGGTGACAAATCAGACATACCAGA                                                       >  SRR13385771.1306812/1‑300 (MQ=60)
                                                                                                                                                                                                                                                    TTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTG                                            >  SRR13385771.735242/1‑301 (MQ=60)
                                                                                                                                                                                                                                                            CGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAA                                    <  SRR13385771.420773/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                TCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGCTTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTC                                 <  SRR13385771.1854978/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                        TGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGATTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCAGTGGAGGCGGTGACAAATCCGACATACCAGATACAACTGGTGGGCGTCAAGTCTAAAGATG                         >  SRR13385771.27679/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                 TGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATACGACATACAAGATACAACTGGTGGGCGTCAAGTATAAAGATGACATGGGGCT               >  SRR13385771.16434/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                  GATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTT              <  SRR13385771.404531/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                        CCAGATTATAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTCTAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACACGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTC        <  SRR13385771.224989/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                          AGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCA      <  SRR13385771.1708836/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                          AGAGTAAAGATGTCTACAGCAAATCAGGGCGTGTAGAGGATTTGGAAATAGACTTGGATTAGCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATGACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTGTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCA      <  SRR13385771.754616/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                              TAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTCATTTCCAGGCC  >  SRR13385771.1764366/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                   
GGCCTTTATTTATGGTCGTTTAACGAAAGAACGGCATCTTGAATTGAGCAGGTATTTAAAAGATAGGACGAGAAACAAGCACATGATCTGTGTCGAAAAAAAGTAGCAAAGAGAAAAAGTAGGAGGATAGGATGAACAGGAAAGTAGCTATCGTAACGGGTACTAATAGTAATCTTGGTCTGAACATTGTGTTCCGTCTGATTGAAACTGAGGACACCAATGTCAGATTGACCATTGTGGTGACTTCTAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTTTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCAGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCC  >  BK006945/341679‑342265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑