Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTGTGGTGACTTCTAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTTTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCAGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGATTTACTGCATTTGGCCACCTACAAAGACTTGAAAAAGCTGGGCATAA  >  BK006945/341913‑342485
                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                                       
TTGTGGTGACTTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGCTTTCTACAACAAATCAGGCCGTGTAGCGGCTTTGGAAATAGACTTTGATTATCTGTTGGTGCACTTCCCCAACATGGTGCGTGTCTTGAACGCATCTTACGCCATCAACAAAAAGTACAGGGCGCTAAACTCCCTTTTCGTGAATGCTGCGCAAGGTCTATTTGACGGTATAGCTTGGACCGGCGCGGTCAAGGAGGTTTACACCAATCCATTGGAGGCGGTGACAAATCAGACATACCAGA                                                                                                                                                                                                                                                                                   >  SRR13385771.1306812/1‑300 (MQ=60)
          TTCGAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTG                                                                                                                                                                                                                                                                        >  SRR13385771.735242/1‑301 (MQ=60)
                  CGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAA                                                                                                                                                                                                                                                                <  SRR13385771.420773/301‑1 (MQ=60)
                      TCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGCTTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTC                                                                                                                                                                                                                                                             <  SRR13385771.1854978/300‑1 (MQ=60)
                              TGCAGGAGGTGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGATTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCAGTGGAGGCGGTGACAAATCCGACATACCAGATACAACTGGTGGGCGTCAAGTCTAAAGATG                                                                                                                                                                                                                                                     >  SRR13385771.27679/1‑300 (MQ=60)
                                       TGATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATACGACATACAAGATACAACTGGTGGGCGTCAAGTATAAAGATGACATGGGGCT                                                                                                                                                                                                                                           >  SRR13385771.16434/1‑301 (MQ=60)
                                        GATTAACCAGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTT                                                                                                                                                                                                                                          <  SRR13385771.404531/301‑1 (MQ=60)
                                              CCAGATTATAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTCTAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACACGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTC                                                                                                                                                                                                                                    <  SRR13385771.224989/301‑1 (MQ=60)
                                                AGATTAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCA                                                                                                                                                                                                                                  <  SRR13385771.1708836/301‑1 (MQ=60)
                                                AGAGTAAAGATGTCTACAGCAAATCAGGGCGTGTAGAGGATTTGGAAATAGACTTGGATTAGCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATGACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTGTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCA                                                                                                                                                                                                                                  <  SRR13385771.754616/301‑1 (MQ=60)
                                                    TAAAGATTTCTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTCATTTCCAGGCC                                                                                                                                                                                                                              >  SRR13385771.1764366/1‑301 (MQ=60)
                                                               ACAACAAATCAGGCCGTGTAGATGATTTGGAAATAGACTTTGATTATCTGTTGGTTGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTAGCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCAGTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTG                                                                                                                                                                                                                    <  SRR13385771.701727/300‑1 (MQ=60)
                                                                CAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGCGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCAAATGTGTTTGCT                                                                                                                                                                                                                  >  SRR13385771.1507904/1‑301 (MQ=60)
                                                                                    AGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACCTACAAGATACAACTGGTGGGCGTCAAGTCTAAACATGACATAGGGC‑TATATTCCAGGCCAACGTGTATGTTCCGTACTACCTTACAAGTAA                                                                                                                                                                                              >  SRR13385771.786881/1‑300 (MQ=60)
                                                                                          TGGAAATAGACTTTGAGTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAATGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGTCGTAAAGTCTAAAGATGACAatgtgcttatttgtaaggccaatgtgtttgataagaactaatttataagtacaattct                                                                                                                                                                                        >  SRR13385771.1377722/1‑243 (MQ=60)
                                                                                           GGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGCGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAACTCCGACATACACGATACAACCGGTGGGCGTCAAGTCTACAGCTGACATGTGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGCACTCCTTTCTCAGTAAAATTCTG                                                                                                                                                                                       >  SRR13385771.1193405/1‑301 (MQ=60)
                                                                                                TAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGACAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTC                                                                                                                                                                                   >  SRR13385771.1249419/1‑300 (MQ=60)
                                                                                                                GTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAA                                                                                                                                                                    <  SRR13385771.302269/299‑1 (MQ=60)
                                                                                                                             ACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGAGGGCGAAAAGTCTAAAGATGACATGGGTGTTATTTTCTAAGTCAATGTATTTGGTCCGTACTAATTTATTAACACAATTGTGCCTCAATTGACCAGGTGAAAGACTTATATTGGTT                                                                                                                                                     >  SRR13385771.1009924/1‑301 (MQ=60)
                                                                                                                                  CATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTTTTTGTTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATT                                                                                                                                                >  SRR13385771.298502/1‑301 (MQ=60)
                                                                                                                                        GATTGTCTTGAACGCTTATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGGTCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGT                                                                                                                                          <  SRR13385771.1575100/301‑1 (MQ=60)
                                                                                                                                         ggtggCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAATATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGATAGGCTTATATTGTTTGGATTTCGAGTA                                                                                                                                         <  SRR13385771.377213/296‑1 (MQ=60)
                                                                                                                                                TGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTAT                                                                                                                                     <  SRR13385771.720780/298‑1 (MQ=60)
                                                                                                                                                    CGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTGATATTGATTGGATTTCGAGTAATATGTCCGAT                                                                                                                              >  SRR13385771.1577955/1‑301 (MQ=60)
                                                                                                                                                           TACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGT                                                                                                                       >  SRR13385771.1389772/1‑301 (MQ=60)
                                                                                                                                                                        AAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAA                                                                                                          <  SRR13385771.653623/301‑1 (MQ=60)
                                                                                                                                                                                     GATAAACTACCTGTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAAC                                                                                                         <  SRR13385771.149903/289‑1 (MQ=60)
                                                                                                                                                                                        AAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACCAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCAAATGAGTTTGGTCCGTAATACTTTATCAGTTAAATTCTGCCTCACTTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTACGCTACTCAGTATCTCTCGTTGAACGATATTGACCTACT                                                                                           >  SRR13385771.1273767/1‑300 (MQ=60)
                                                                                                                                                                                            TACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGAGGACATGGGGCGTATATTCCAGGCCAATGTGTTGGGTCCGAACCACTTTATCAGTAAAATTCGGCCGCAATTGACCAGGGGAAAGGCTTATATTGTTGGGATTTCGAGTAGTATGTCCGAaccgaaggaccgtacggtgaacgatagtgaactacgaaagc                                                                                      >  SRR13385771.1479374/1‑260 (MQ=60)
                                                                                                                                                                                              CCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGAGCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGATGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCGTATGTTCCAGGCCAATGTGTTTGGTCCGGACGACTTGATCAGTAAAATTCTGCCGCACTTGACCAGGGGAAAGGCGTATATGGTTTGGATGTCGAGTATTATGTCCGATCCGAAGTATCTTTCGTTGAACGAGATTGAACTACTAAAGAC                                                                                     >  SRR13385771.333744/1‑300 (MQ=60)
                                                                                                                                                                                                 TTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAAT                                                                                 >  SRR13385771.1238489/1‑301 (MQ=60)
                                                                                                                                                                                                     GTGAATGCTGCGCAAGGTATCTTGGACGGTATAGAGTGGTTCGGAGCGGTCAAGGAGGTTTTCGGCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGAGGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCT                                                                             <  SRR13385771.1835980/301‑1 (MQ=60)
                                                                                                                                                                                                       GAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCT                                                                           <  SRR13385771.1017891/301‑1 (MQ=60)
                                                                                                                                                                                                          TGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATAGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATT                                                                                                                                                                                          >  SRR13385771.1073924/1‑187 (MQ=60)
                                                                                                                                                                                                          AGCTGCGAAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCGATTGGAGGCGGTGACAAATCCGACATAGAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTACGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTAT                                                                        <  SRR13385771.1436295/301‑1 (MQ=60)
                                                                                                                                                                                                                              ACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCCCCAATCCATTGGCGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTCCTACTTTCTCCGTAAAATTCTGCCTCAATTGACAAGGGGAAAGGCTTATCTTGTTTGGCTTTCACGTCTTATGTACGATCCTAAGTCTCTTTCGTTGCACGATCTTGAACTAATAAAGACACATGCATCTTCTGCGGGCTCCCAGCGTTTAGT                                                    >  SRR13385771.67974/1‑301 (MQ=60)
                                                                                                                                                                                                                                 GTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGA                                                 <  SRR13385771.1180995/301‑1 (MQ=60)
                                                                                                                                                                                                                                         TGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGATTTACTGC                                         >  SRR13385771.471659/1‑301 (MQ=60)
                                                                                                                                                                                                                                           GATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAATGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAG                                                            <  SRR13385771.874648/280‑1 (MQ=60)
                                                                                                                                                                                                                                                                      CAATCCATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGATTTACTGCATTTGGCCACCTACAAAGACTTGAAAAAG            <  SRR13385771.27992/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                           CATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGATTTACTGCATTTGGCCACCTACAAAGACTTGAAAAAGCTGGG       <  SRR13385771.1663135/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                            ATTGGAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGATTTACTGCATTTGGCCACCTACAAAGACTTGAAAAAGCTGGGC      <  SRR13385771.1521802/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                GAGGCGGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGATTTACTGCATTTGGCCACCTACAAAGACTTGAAAAAGCTGGGCATAA  <  SRR13385771.1471197/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                                       
TTGTGGTGACTTCTAGAACGCTTCCTCGAGTGCAGGAGGTGATTAACCAGATTAAAGATTTTTACAACAAATCAGGCCGTGTAGAGGATTTGGAAATAGACTTTGATTATCTGTTGGTGGACTTCACCAACATGGTGAGTGTCTTGAACGCATATTACGACATCAACAAAAAGTACAGGGCGATAAACTACCTTTTCGTGAATGCTGCGCAAGGTATCTTTGACGGTATAGATTGGATCGGAGCGGTCAAGGAGGTTTTCACCAATCCATTGGAGGCAGTGACAAATCCGACATACAAGATACAACTGGTGGGCGTCAAGTCTAAAGATGACATGGGGCTTATTTTCCAGGCCAATGTGTTTGGTCCGTACTACTTTATCAGTAAAATTCTGCCTCAATTGACCAGGGGAAAGGCTTATATTGTTTGGATTTCGAGTATTATGTCCGATCCTAAGTATCTTTCGTTGAACGATATTGAACTACTAAAGACAAATGCCTCTTATGAGGGCTCCAAGCGTTTAGTTGATTTACTGCATTTGGCCACCTACAAAGACTTGAAAAAGCTGGGCATAA  >  BK006945/341913‑342485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑