Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
6054 |
0.0 |
0 |
0.0% |
0 |
0.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATAATTCATCGACAGTGATTTTACCGTTCCAGTAACCTTCAGTGGCCTTCTTTAATTCTCTGTTTGGACCGATTCTTGGGAACCCTAAGACAGCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCTTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGG > BK006939/342061‑342629
|
AATAATTCATCGACAGTGATTTTACCGTTCCAGTAACCTTCAGTGGCCTTCTTTAATTCGCTGGTTTGACCGATTCTTGGGAACCCTAAGACAGCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGGATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGAGGCTTGCTTTTTGATGATAAAGGAAGAGTTTAACAAAAATAGTTAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAAGATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTTTCTTTCCTTTTTTTCTT < SRR13385772.956301/301‑1 (MQ=60)
ATAATTCATCGACAGTGATTTTACCGTTCCAGTCACATTCAGTGGCCTTCTTTACTTCTCTGTTTGGACCGATTCTTGGGCACCCTAAGACAGCAGACTGAACAATCTATGATATGCACTTTGAAATCAACTTGGTATTTTGATTCTTAGAGCGTTGTAAATGCTCTTAGCTGCTTGCTTTTTTAAGATACCGGCAGACTTTAACAACAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATCGCCATCTCTATCAATTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTtccttcctttttctcctt > SRR13385772.767522/1‑283 (MQ=60)
CCTTCAGTGGCCTTCTTTAATTCTCTGTTTGGACCGATTCTTGGGAACACTAAGACAGCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGATAGTAAAGATGGAAATATCTATCACTTATATAGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑Cctttttttatttcctttttttctttcgaagttgg > SRR13385772.474037/1‑267 (MQ=60)
TCAGTGGCCTTCTTTAATTCTCTGTTTGGACCGATTCTTGGGAACCCTAAGACAGCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑Cctttttttctttcctttttttctttcgcagttggga < SRR13385772.461514/300‑37 (MQ=60)
GGACCGATTCTTGGGAACCCTAAGACAGCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTG < SRR13385772.691442/301‑1 (MQ=60)
GAACCCTAAGACAGCAGATTGAACCAGTTTGTATATGTACTTTGAAATTATATTGGGATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTGTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTAGCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTT < SRR13385772.1249159/301‑1 (MQ=60)
TAAGACAGCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCTTTCCTTT > SRR13385772.926049/1‑208 (MQ=60)
GCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCAC > SRR13385772.944804/1‑301 (MQ=60)
CAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACA < SRR13385772.96428/301‑1 (MQ=60)
CATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTC < SRR13385772.306635/301‑1 (MQ=60)
ATATTTACTTTGAAATTATATTGGTATTTTGTTTCTTATAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTGTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACGTATATAGAA‑TGTTTTTTTTCTTTCCTTTTTTTCTTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTG < SRR13385772.1113495/300‑1 (MQ=60)
ACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCTTTCCTTTTTTTCT > SRR13385772.1096877/1‑182 (MQ=60)
TATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGACATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTC < SRR13385772.822590/256‑1 (MQ=60)
GAGTGGTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGGAAAGATGTAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCGTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTGGGGAAAACTAGCTAGCTTCCCTTAAATTAGGGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATGGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGG < SRR13385772.8267/301‑1 (MQ=60)
AGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGG > SRR13385772.306669/1‑301 (MQ=60)
AATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTATTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGATCTCAATTGCGCAGAACGAGCTATCACTAACACAGTTTTtccacacggcgatagagc > SRR13385772.133474/1‑282 (MQ=60)
TAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAG < SRR13385772.530509/299‑1 (MQ=60)
TATGATAAAGGAAGAGTTTAACAAAAATATTGAATTCGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATG < SRR13385772.172527/291‑1 (MQ=60)
AAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTTCTTTCCTTTTTTTCTTTCCTTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAACTTAGCTAGCTTCCCTTAACTTTGTTCATCTATCGCCTTTGTTCCATCTTCACATTCACAGTTTTCAATTGAGCAGACCGAGCTATTACGACCACAGTTTTGCGACCGGGGGATTGTGCGAAAGAGCCTCCATGACTGCGATTACTCGAGCGAAAAATATTAGCCCT > SRR13385772.1130942/1‑301 (MQ=60)
AATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTGCTTGCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGGGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGATCGAAAGAGCTGCCATGACTGCGATGACCCTAGCGAAAAATTTTGGCCCTTT > SRR13385772.684889/1‑301 (MQ=60)
AAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAA < SRR13385772.894539/301‑1 (MQ=60)
ggAATGCTAGTAAAGATGGAAATATCTATCACGTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCGTTCCTTTTTTTCTTTCCTTGTTTTCGTGCGCATTTGGGAAAACTAGCTATCTGCCCTTAGATTAGGTCATCTATCGCTTTTGTTGCAGATTCACATTCACAGTTCGCAAGTGGGCAGAGCGAGCTATGACTACCACAGTTGTGCGACCGGGAGAGAGAGCGAAAGAGCTGCGATGACTGCGATGACGCTAGCGAAAAATATTGGCCCTTTGCACGTGCGCGACTAAACGAGgtct < SRR13385772.1278390/299‑5 (MQ=60)
GTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTTTCTTTCCTTTTTTTCTTTCC‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGT < SRR13385772.474055/301‑1 (MQ=60)
GGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTTCTTTCCTTTTTTTCTTTCC‑‑‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATACAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAAACAGTTCGCTAGTAGTCCCCTTTCTT > SRR13385772.899144/1‑301 (MQ=60)
ATCACTTATATAGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTT‑T‑TTTTTTTTCCTTTTTTCCCCTTTTTTTTTTTTTTCCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTT < SRR13385772.628337/300‑1 (MQ=60)
ttttctttcctttttttctttccTTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGGCCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTT < SRR13385772.576148/277‑1 (MQ=60)
tcctttttttctttccTTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCT > SRR13385772.20835/17‑137 (MQ=60)
tttctttccTTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCCTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCAGTTTCTGGTTTTTTCCCTTTACCGGTCCACATTTTTTCACCTGACTCCGG > SRR13385772.31597/10‑301 (MQ=60)
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AATAATTCATCGACAGTGATTTTACCGTTCCAGTAACCTTCAGTGGCCTTCTTTAATTCTCTGTTTGGACCGATTCTTGGGAACCCTAAGACAGCAGATTGAACCATTTTTGATATGTACTTTGAAATTATATTGGTATTTTGTTTCTTAGAGTGTTGTCAATGCTCTTAGATGCTTGCTTTTTTATGATAAAGGAAGAGTTTAACAAAAATATTGAATACGTAAAAGAGAAACTAATGCTAGTAAAGATGGAAATATCTATCACTTATATAGAA‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTT‑TTTTCTTTCCTTTTTTTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑CGCAGTTGGGAAAACTAGCTAGCTTCCCTTAAATTAGTGCATCTATCGCATTTGTTCCATATTCACATTCACAGTTCTCAATTGAGCAGAACGAGCTATGACTACCACAGTTTTGCGACCGGGAGATAGAGCGAAAGAGCTGCCATGACTGCGATGACTCTAGCGAAAAATATTGGCCTTTTGCACGTTCGCGACTAAACGAGTTCGATAGTAGTCCCGTTTCTGGTTTTTTCCCTTTACCGGCCCACATTTTTTCACCTGACTCCGG > BK006939/342061‑342629
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
