Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTTTTGGAAGGCAGAGAATCAAACTGGCTCGTTGAATTTGCCAAAGATTTCCGTAAAAGATTTCTGTCGCTTCTTTCTTATGATTTTCATAAGTTTACTGCCGTTCAAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGGTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGATGCTATTGCTGAAATGGATGGTGAAGAAATC  >  BK006947/377613‑378176
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                 
GTTTTGGAAGGCAGAGAATCAAACTGGCTCGTTGAATTTGCCAAAGATTTCCGTAAAAGATTTCTGTCGCTTCTTTCTTATGATTTTCATAAGTTTACTGCCGTTCAAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTG                                                                                                                                                                                                                                                                                                 >  SRR13385771.887360/1‑277 (MQ=60)
                AATCAAACTGGCTCGTTGAATTTGCCAAAGATTTCCGTAAAAGATTTCTGTCGCTTCTTTCTTATGATTTTCATAAGTTTACTGCCGTTCAAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATA                                                                                                                                                                                                                                                          >  SRR13385771.555959/1‑300 (MQ=60)
                                             GATTTCCGTAAAAGATTTCTGTCGCTTCTTTCTTATGATTTTCATAAGTTTACTGCCGTTCAAGCCTTAAGTGCCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGACAAGATTGGATAGCTACCCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCCCTTTTGTACTTCGGCGATAAACTGGGAGATTCAGTAAAACTATCAAGCG                                                                                                                                                                                                                            >  SRR13385771.1148475/1‑301 (MQ=60)
                                                                        CTTTCTTATGATTTTCATACGTTTACTGACGTTCAAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGAGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGCTACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGATATCCTGTTGGCTAT                                                                                                                                                                                                   >  SRR13385771.1734208/1‑299 (MQ=60)
                                                                               ATGATTTTCATAAGTTTACTGCCGTTCAAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAACAGATTGGATAGCTCCTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTAC                                                                                                                                                                                           >  SRR13385771.1193657/1‑300 (MQ=60)
                                                                                        ATAAGTTTACTGCCGTTCAAGCCTTACGTGTCATTGAAAGTAGTAAGAAAGCACACGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCAATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATCTGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCAAGAGTGCTATCCTGTTGGCTCTAGGGTTACAGCGTAACA                                                                                                                                                                                  >  SRR13385771.1831338/1‑300 (MQ=60)
                                                                                                ACTGCCGTTCAAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTAACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGAC                                                                                                                                                                          <  SRR13385771.204432/300‑1 (MQ=60)
                                                                                                          AAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAA                                                                                                                                                               <  SRR13385771.260055/301‑1 (MQ=60)
                                                                                                          AAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAA                                                                                                                                                               <  SRR13385771.216642/301‑1 (MQ=60)
                                                                                                          AAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGATATCATGTTGGCTATAGGGTTACAGCGTCAAAACATCGACACTATTGCCA                                                                                                                                                                >  SRR13385771.1538568/1‑300 (MQ=60)
                                                                                                           AGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTAACAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATAGACACTATTGCCAA                                                                                                                                                               >  SRR13385771.1853949/1‑300 (MQ=60)
                                                                                                                                                  TTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTT                                                                                                                       >  SRR13385771.1112964/1‑301 (MQ=60)
                                                                                                                                                   TTGTCTGATGACGAAAAGCATGATAATAAAGAATGTACGCGGACGCATCTGGATGACATTTTTTCTCCATTGGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTGTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCGATAGGGTTACAGCGTAAAAACATCGACACTATGGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTT                                                                                                                       <  SRR13385771.1378820/300‑1 (MQ=60)
                                                                                                                                                      GCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGA                                                                                                                   <  SRR13385771.1603079/301‑1 (MQ=60)
                                                                                                                                                                 AAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATG                                                                                                           >  SRR13385771.358750/1‑298 (MQ=60)
                                                                                                                                                                    GCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAA                                                                                                     <  SRR13385771.565209/301‑1 (MQ=60)
                                                                                                                                                                            ATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTC                                                                                              >  SRR13385771.1528860/1‑300 (MQ=60)
                                                                                                                                                                                AGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTAC                                                                                         <  SRR13385771.1810616/301‑1 (MQ=60)
                                                                                                                                                                                  AATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTT                                                                                       >  SRR13385771.413914/1‑301 (MQ=60)
                                                                                                                                                                                  AATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTG                                                                                                                                                                                                                                                                                                 >  SRR13385771.21453/1‑99 (MQ=60)
                                                                                                                                                                                                 ATCTGGATGACATTTTTTCTACATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTA                                                                          >  SRR13385771.1497738/1‑299 (MQ=60)
                                                                                                                                                                                                             TTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGC                                                                                                                                                                                                                  <  SRR13385771.1603741/151‑1 (MQ=60)
                                                                                                                                                                                                                   CACCATTTGACTTGAACAGATTGGATCGCTACTCCACTAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATACAATGGGAGATTCAGTAACACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTGCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAAC                                                      <  SRR13385771.203645/301‑1 (MQ=60)
                                                                                                                                                                                                                                  AAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTAGTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAA                                       <  SRR13385771.660498/301‑1 (MQ=60)
                                                                                                                                                                                                                                         GGATAGCTACTCAAATAAGTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTGTGTACTTCGTCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGA                                 <  SRR13385771.1837249/300‑1 (MQ=60)
                                                                                                                                                                                                                                            TAGCTACTCACATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAACACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGCGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCAA                                                                     <  SRR13385771.1624278/261‑1 (MQ=60)
                                                                                                                                                                                                                                                    CAAATAATTTGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGATGCTATTGCT                       <  SRR13385771.1136215/299‑1 (MQ=60)
                                                                                                                                                                                                                                                            TGGCTAGATTATCACGTTATCGTTGATATGAGACCCATGCTTGCTCTTTGTTACTTCGGCGATAAAATGGTAGGTTCAGTAAAACTATCAAGCGTCCAGAGTGCTATGCTGTTGGCTATAGTGTTACAGCGTAGAAACATCGACACTATTGCCAATGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTGCTTCCGTCAGCTGTTAATCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGATGCTATTGCTGAAATGGAT              <  SRR13385771.1230883/300‑1 (MQ=60)
                                                                                                                                                                                                                                                             TGCTAGATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGATGCTATTGCTGAAATGG                <  SRR13385771.1384336/297‑1 (MQ=60)
                                                                                                                                                                                                                                                                   ATTATCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGATGCTATTGCTGAAATGAATGGTGA         >  SRR13385771.663016/1‑298 (MQ=60)
                                                                                                                                                                                                                                                                       TCACGTTATCGTTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGATGCTATTGCTGAAATGGATGGTGAAGAAATC  >  SRR13385771.307730/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                 
GTTTTGGAAGGCAGAGAATCAAACTGGCTCGTTGAATTTGCCAAAGATTTCCGTAAAAGATTTCTGTCGCTTCTTTCTTATGATTTTCATAAGTTTACTGCCGTTCAAGCCTTAAGTGTCATTGAAAGTAGTAAGAAAGCACAAGATTTGTCTGATGACGAAAAGCATGATAATAAAGAATTGACGCGGACGCATCTGGATGACATTTTTTCTCCATTTGACTTGAAAAGATTGGATAGCTACTCAAATAATTTGCTAGATTATCACGTTATCGGTGATATGATACCCATGCTTGCTCTTTTGTACTTCGGCGATAAAATGGGAGATTCAGTAAAACTATCAAGCGTCCAGAGTGCTATCCTGTTGGCTATAGGGTTACAGCGTAAAAACATCGACACTATTGCCAAGGAATTGAATTTACCTTCCAATCAAACTATTGCTATGTTTGCGAAGATCATGAGAAAAATGTCTCAGTACTTCCGTCAGCTGTTAAGCCAATCAATTGAAGAAACTCTACCAAATATCAAAGATGATGCTATTGCTGAAATGGATGGTGAAGAAATC  >  BK006947/377613‑378176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑