Pputida_carbon_ALE_2: KT2440_NRELM9_XylD_xylose

Notes

Publication: None

Mutation Type	Unique	Observed
Single Base Substitutions	62	123
Multiple Base Substitutions	0	0
Deletions	5	16
Insertions	15	33
Mobile Element Insertions	0	0
Amplifications	0	0
Gene Conversions	0	0
Inversions	0	0
Total	82	172

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A25 F0 I1 R1	3	123.2	6165484	93.7%	5777058	132.5
A25 F11 I1 R1	11	788.4	37250750	92.1%	34307940	143.1
A25 F37 I1 R1	15	134.5	6416132	89.7%	5755270	132.7
A25 F66 I0 R1	1294	212.7	9046086	97.5%	8819933	149.0
A25 F66 I1 R1	15	388.5	16872376	96.3%	16248098	148.2
A26 F10 I1 R1	11	16.8	770476	94.0%	724247	144.2
A26 F35 I1 R1	15	22.5	1172340	88.9%	1042210	132.9
A26 F72 I0 R1	3046	294.6	18336838	67.6%	12395702	148.6
A26 F72 I1 R1	15	251.2	10896892	96.5%	10515500	148.3
A27 F14 I1 R1	12	347.9	16462144	93.7%	15425028	140.4
A27 F39 I1 R1	16	43.9	2012446	89.9%	1809188	133.1
A27 F51 I0 R1	86	21.1	1139054	79.4%	904408	133.2
A27 F51 I2 R1	13	15.7	883546	89.6%	791657	133.1
A27 F58 I0 R1	35	11.3	607456	80.1%	486572	133.1
A27 F58 I2 R1	15	214.6	9455664	90.0%	8510097	132.8
A27 F76 I0 R1	3238	164.4	10246624	67.0%	6865238	148.5
A27 F76 I1 R1	15	246.9	10856068	96.0%	10421825	146.6
A27 F76 I2 R1	16	354.5	15212414	95.9%	14588705	149.0
A28 F11 I1 R1	11	342.9	16076890	93.9%	15096199	141.4
A28 F36 I1 R1	14	35.7	1674236	89.9%	1505138	133.2
A28 F48 I0 R1	17	9.2	543684	80.3%	436578	133.1
A28 F48 I1 R1	18	43.7	2337284	89.8%	2098881	133.0
A28 F56 I0 R1	193	14.9	1024624	64.7%	662931	133.0
A28 F56 I3 R1	51	59.6	2747906	89.7%	2464871	132.9
A28 F75 I0 R1	3451	177.8	10903450	69.6%	7588801	145.2
A28 F75 I1 R1	16	266.3	11463262	97.1%	11130827	148.2
A28 F75 I2 R1	15	492.2	21031502	96.1%	20211273	149.0