breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	6,429	Δ1 bp	6.0%	intergenic (‑47/+42)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	6,433:1	+T	6.1%	intergenic (‑51/+38)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	14,802	T→C	5.3%	R491R (CGT→CGC)	gyrB →	DNA gyrase subunit B
RA	14,805	T→C	5.5%	Y492Y (TAT→TAC)	gyrB →	DNA gyrase subunit B
RA	14,808	C→T	5.6%	H493H (CAC→CAT)	gyrB →	DNA gyrase subunit B
RA	14,811	C→G	6.0%	N494K (AAC→AAG)	gyrB →	DNA gyrase subunit B
RA	14,826	C→G	5.8%	T499T (ACC→ACG)	gyrB →	DNA gyrase subunit B
RA	14,838	T→C	6.0%	V503V (GTT→GTC)	gyrB →	DNA gyrase subunit B
RA	14,845	T→G	6.1%	S506A (TCG→GCG)	gyrB →	DNA gyrase subunit B
RA	14,850	C→T	6.2%	H507H (CAC→CAT)	gyrB →	DNA gyrase subunit B
RA	14,853	C→T	5.9%	I508I (ATC→ATT)	gyrB →	DNA gyrase subunit B
RA	14,866	C→T	6.1%	L513L (CTG→TTG)	gyrB →	DNA gyrase subunit B
RA	14,887	C→A	5.3%	L520M (CTG→ATG)	gyrB →	DNA gyrase subunit B
RA	14,895	G→A	5.3%	E522E (GAG→GAA)	gyrB →	DNA gyrase subunit B
RA	14,899	G→A	5.5%	V524I (GTC→ATC)	gyrB →	DNA gyrase subunit B
RA	14,911	T→C	5.6%	Y528H (TAC→CAC) ‡	gyrB →	DNA gyrase subunit B
RA	14,913	C→T	5.6%	Y528Y (TAC→TAT) ‡	gyrB →	DNA gyrase subunit B
RA	14,922	T→C	5.3%	I531I (ATT→ATC)	gyrB →	DNA gyrase subunit B
RA	14,925	C→G	5.6%	A532A (GCC→GCG)	gyrB →	DNA gyrase subunit B
RA	26,837:1	+A	7.3%	intergenic (+33/+152)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	26,844	A→T	9.1%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	45,680	C→G	6.7%	intergenic (‑156/+47)	cadA‑I ← / ← PP_0042	cadmium translocating P‑type ATPase/hypothetical protein
RA	58,747	T→A	8.5%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	8.1%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,340	G→T	5.4%	intergenic (+28/+147)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,342	A→T	5.2%	intergenic (+30/+145)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,344	A→C	5.2%	intergenic (+32/+143)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	85,066	T→C	5.1%	intergenic (+44/+86)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,074	A→G	6.2%	intergenic (+52/+78)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,077	T→G	7.0%	intergenic (+55/+75)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,078:1	+T	6.5%	intergenic (+56/+74)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,081	T→G	8.6%	intergenic (+59/+71)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,088	C→A	5.1%	intergenic (+66/+64)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,091	Δ1 bp	5.3%	intergenic (+69/+61)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,093	C→A	5.9%	intergenic (+71/+59)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,096	C→T	5.8%	intergenic (+74/+56)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	85,104	G→A	5.2%	intergenic (+82/+48)	aroE → / ← PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
RA	90,358	A→G	6.5%	intergenic (+33/+89)	PP_0079 → / ← PP_0080	transcriptional regulator/hypothetical protein
RA	93,015	G→A	6.0%	F193F (TTC→TTT) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,016	A→T	6.0%	F193Y (TTC→TAC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,024	T→G	7.7%	E190D (GAA→GAC)	trpB ←	tryptophan synthase subunit beta
RA	93,027	G→A	7.3%	V189V (GTC→GTT)	trpB ←	tryptophan synthase subunit beta
RA	93,030	G→A	7.3%	N188N (AAC→AAT)	trpB ←	tryptophan synthase subunit beta
RA	93,036	A→G	10.7%	V186V (GTT→GTC)	trpB ←	tryptophan synthase subunit beta
RA	93,042	G→A	12.8%	D184D (GAC→GAT)	trpB ←	tryptophan synthase subunit beta
RA	93,048	C→A	12.9%	L182L (CTG→CTT)	trpB ←	tryptophan synthase subunit beta
RA	93,051	G→C	13.1%	A181A (GCC→GCG)	trpB ←	tryptophan synthase subunit beta
RA	93,072	C→G	14.5%	L174L (CTG→CTC)	trpB ←	tryptophan synthase subunit beta
RA	93,075	G→C	14.9%	T173T (ACC→ACG)	trpB ←	tryptophan synthase subunit beta
RA	93,078	A→G	14.8%	G172G (GGT→GGC)	trpB ←	tryptophan synthase subunit beta
RA	93,081	G→A	15.0%	T171T (ACC→ACT) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,082	G→T	14.5%	T171N (ACC→AAC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,087	G→A	14.0%	A169A (GCC→GCT)	trpB ←	tryptophan synthase subunit beta
RA	93,090	G→C	14.0%	T168T (ACC→ACG)	trpB ←	tryptophan synthase subunit beta
RA	93,093	A→T	13.5%	V167V (GTT→GTA)	trpB ←	tryptophan synthase subunit beta
RA	93,096	T→C	13.5%	P166P (CCA→CCG)	trpB ←	tryptophan synthase subunit beta
RA	93,100	A→T	12.1%	V165E (GTG→GAG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,101	C→T	11.8%	V165M (GTG→ATG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,102	G→T	11.9%	I164I (ATC→ATA) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,104	T→C	11.9%	I164V (ATC→GTC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,105	C→T	11.9%	E163E (GAG→GAA)	trpB ←	tryptophan synthase subunit beta
RA	93,111	G→A	13.7%	G161G (GGC→GGT)	trpB ←	tryptophan synthase subunit beta
RA	93,132	C→G	14.2%	V154V (GTG→GTC)	trpB ←	tryptophan synthase subunit beta
RA	93,138	C→T	12.3%	A152A (GCG→GCA) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,140	C→G	12.8%	A152P (GCG→CCG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,143	G→T	12.8%	Q151K (CAG→AAG)	trpB ←	tryptophan synthase subunit beta
RA	93,147	G→A	12.4%	R149R (CGC→CGT)	trpB ←	tryptophan synthase subunit beta
RA	93,150	C→T	12.7%	E148E (GAG→GAA)	trpB ←	tryptophan synthase subunit beta
RA	93,153	G→A	11.5%	I147I (ATC→ATT) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,155	T→C	11.4%	I147V (ATC→GTC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,159	G→A	12.1%	T145T (ACC→ACT)	trpB ←	tryptophan synthase subunit beta
RA	93,171	G→A	11.7%	Y141Y (TAC→TAT)	trpB ←	tryptophan synthase subunit beta
RA	93,176	T→C	10.1%	I140V (ATC→GTC)	trpB ←	tryptophan synthase subunit beta
RA	93,195	G→A	6.8%	R133R (CGC→CGT)	trpB ←	tryptophan synthase subunit beta
RA	93,198	C→G	6.5%	A132A (GCG→GCC)	trpB ←	tryptophan synthase subunit beta
RA	93,201	G→T	6.2%	A131A (GCC→GCA)	trpB ←	tryptophan synthase subunit beta
RA	93,204	G→A	6.5%	V130V (GTC→GTT)	trpB ←	tryptophan synthase subunit beta
RA	93,207	A→G	6.5%	T129T (ACT→ACC)	trpB ←	tryptophan synthase subunit beta
RA	93,210	G→T	6.6%	A128A (GCC→GCA)	trpB ←	tryptophan synthase subunit beta
RA	93,213	G→T	6.6%	T127T (ACC→ACA) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,215	T→A	7.1%	T127S (ACC→TCC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,216	G→T	6.6%	A126A (GCC→GCA)	trpB ←	tryptophan synthase subunit beta
RA	93,219	G→A	6.6%	V125V (GTC→GTT)	trpB ←	tryptophan synthase subunit beta
RA	93,222	A→G	6.7%	G124G (GGT→GGC)	trpB ←	tryptophan synthase subunit beta
RA	93,225	G→A	6.7%	H123H (CAC→CAT)	trpB ←	tryptophan synthase subunit beta
RA	93,229	A→T	6.6%	M122K (ATG→AAG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,230	T→G	6.6%	M122L (ATG→CTG) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,231	G→A	6.3%	G121G (GGC→GGT)	trpB ←	tryptophan synthase subunit beta
RA	93,234	G→A	6.4%	A120A (GCC→GCT)	trpB ←	tryptophan synthase subunit beta
RA	93,246	G→C	7.8%	A116A (GCC→GCG)	trpB ←	tryptophan synthase subunit beta
RA	93,252	C→G	5.7%	L114L (CTG→CTC) ‡	trpB ←	tryptophan synthase subunit beta
RA	93,254	G→T	5.9%	L114M (CTG→ATG) ‡	trpB ←	tryptophan synthase subunit beta
RA	96,132	C→G	6.4%	G185R (GGC→CGC)	PP_0088 ←	alkanal monooxygenase
RA	96,133	G→C	6.1%	R184R (CGC→CGG) ‡	PP_0088 ←	alkanal monooxygenase
RA	96,134	C→G	6.1%	R184P (CGC→CCC) ‡	PP_0088 ←	alkanal monooxygenase
RA	101,803	A→T	6.2%	K208M (AAG→ATG)	prlC →	oligopeptidase A
RA	126,115	A→G	7.0%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	7.0%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	127,121	C→G	8.6%	intergenic (‑31/+39)	thrB ← / ← PP_0122	homoserine kinase/hypothetical protein
RA	127,122	C→G	8.3%	intergenic (‑32/+38)	thrB ← / ← PP_0122	homoserine kinase/hypothetical protein
RA	127,123	G→C	9.0%	intergenic (‑33/+37)	thrB ← / ← PP_0122	homoserine kinase/hypothetical protein
RA	139,740	T→G	5.9%	Q255P (CAG→CCG)	kinB ←	alginate biosynthesis sensor protein KinB
RA	139,749	A→C	9.1%	L252R (CTG→CGG)	kinB ←	alginate biosynthesis sensor protein KinB
RA	155,546	A→C	5.9%	intergenic (‑251/+32)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	161,733	A→C	12.3%	intergenic (‑228/+18)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	162,281	A→T	7.9%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	7.8%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	170,839	T→G	6.8%	intergenic (+20/‑550)	PP_0159 → / → PP_16SA	family III CoA‑transferase/16S ribosomal RNA
RA	170,841	A→C	5.6%	intergenic (+22/‑548)	PP_0159 → / → PP_16SA	family III CoA‑transferase/16S ribosomal RNA
RA	181,943	C→T	25.0%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	G→A	9.3%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,035	A→T	8.9%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	9.0%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	191,912	Δ1 bp	5.3%	coding (1606/2157 nt)	paxB ←	toxin secretion ATP‑binding protein
RA	191,916:1	+G	5.2%	coding (1602/2157 nt)	paxB ←	toxin secretion ATP‑binding protein
RA	195,559	C→A	24.7%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	8.3%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	8.4%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	40.6%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	18.6%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	21.5%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	21.4%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	22.6%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	10.5%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	17.8%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	6.4%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	12.5%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	6.0%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,185	C→T	5.3%	T897T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	13.5%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	18.1%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	19.7%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	16.5%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	8.4%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,777	T→A	6.5%	L1428Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	212,034	T→A	7.5%	L5847Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	220,561	A→T	5.8%	intergenic (+18/‑110)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,562	C→G	5.7%	intergenic (+19/‑109)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	233,832	A→T	13.8%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	14.0%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	13.9%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	237,452	T→G	5.3%	D111E (GAT→GAG)	algR →	alginate biosynthesis regulatory protein
RA	244,785	G→A	7.1%	R154K (AGG→AAG)	algP →	transcriptional regulator AlgP
RA	253,348	T→C	5.7%	intergenic (‑133/+38)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,356	C→T	9.6%	intergenic (‑141/+30)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,358	A→T	9.7%	intergenic (‑143/+28)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,359	A→T	9.7%	intergenic (‑144/+27)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,361	A→G	9.7%	intergenic (‑146/+25)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,369	G→A	7.3%	intergenic (‑154/+17)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	264,017	G→T	9.6%	L256L (CTG→CTT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,020	T→C	7.4%	G257G (GGT→GGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,029	C→G	12.8%	A260A (GCC→GCG)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,032	G→T	14.3%	P261P (CCG→CCT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,056	C→T	14.0%	D269D (GAC→GAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,059	G→C	14.7%	L270L (CTG→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,062	C→T	15.2%	D271D (GAC→GAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,063	A→G	15.5%	K272E (AAG→GAG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,064	A→C	15.6%	K272T (AAG→ACG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,065	G→C	14.0%	K272N (AAG→AAC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,068	G→C	14.8%	A273A (GCG→GCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,074	G→A	14.9%	E275E (GAG→GAA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,077	C→T	15.1%	G276G (GGC→GGT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,080	G→T	15.3%	A277A (GCG→GCT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,081	A→C	15.1%	I278L (ATC→CTC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,083	C→T	15.1%	I278I (ATC→ATT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,087	T→G	15.1%	S280A (TCC→GCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,092	G→A	14.0%	K281K (AAG→AAA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,094	A→T	13.7%	Y282F (TAC→TTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,098	T→C	13.6%	R283R (CGT→CGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,110	G→A	17.3%	Q287Q (CAG→CAA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,132	A→C	18.0%	I295L (ATC→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,137	C→T	16.4%	Y296Y (TAC→TAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,140	G→A	15.8%	V297V (GTG→GTA)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,155	C→T	13.9%	Y302Y (TAC→TAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,158	C→T	13.6%	D303D (GAC→GAT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,161	G→C	13.0%	A304A (GCG→GCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,164	C→T	11.2%	F305F (TTC→TTT)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,176	G→C	5.7%	L309L (CTG→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,177	G→T	5.9%	A310S (GCC→TCC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,180	G→A	5.8%	A311T (GCT→ACT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,181	C→A	5.6%	A311D (GCT→GAT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,182	T→G	5.8%	A311A (GCT→GCG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,185	A→G	5.8%	A312A (GCA→GCG)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,188	T→C	5.8%	V313V (GTT→GTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,190	C→G	5.7%	A314G (GCC→GGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,192	A→T	5.5%	K315* (AAG→TAG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,193	A→C	5.5%	K315T (AAG→ACG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,197	G→C	5.7%	L316L (CTG→CTC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,202	T→C	5.6%	I318T (ATC→ACC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,206	T→C	5.7%	G319G (GGT→GGC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,213	C→T	5.8%	L322L (CTG→TTG) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,215	G→C	5.7%	L322L (CTG→CTC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,218	A→C	5.8%	E323D (GAA→GAC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,221	A→G	5.9%	E324E (GAA→GAG)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,226	C→T	5.9%	T326I (ACC→ATC)	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,229	C→A	5.7%	T327N (ACC→AAC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,230	C→T	5.9%	T327T (ACC→ACT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,231	A→C	5.9%	T328P (ACT→CCT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,232	C→T	5.9%	T328I (ACT→ATT) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	264,233	T→C	6.0%	T328T (ACT→ACC) ‡	gabD‑I →	succinate‑semialdehyde dehydrogenase
RA	278,754	T→A	8.8%	intergenic (‑249/+66)	PP_0224 ← / ← sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
RA	278,766	T→A	7.5%	intergenic (‑261/+54)	PP_0224 ← / ← sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
RA	284,587	T→A	14.7%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	14.6%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	295,694	C→G	8.1%	intergenic (+41/+101)	PP_0241 → / ← PP_0242	transporter/TetR family transcriptional regulator
RA	311,231	T→C	5.4%	T383A (ACC→GCC)	PP_0256 ←	putative oxidoreductase
RA	311,236	C→G	5.2%	G381A (GGC→GCC) ‡	PP_0256 ←	putative oxidoreductase
RA	311,237	C→G	5.2%	G381R (GGC→CGC) ‡	PP_0256 ←	putative oxidoreductase
RA	311,242	G→A	5.1%	A379V (GCG→GTG)	PP_0256 ←	putative oxidoreductase
RA	321,742	T→C	7.1%	intergenic (+27/+431)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	321,743	G→A	7.2%	intergenic (+28/+430)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,135	G→A	15.4%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	14.3%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	336,291	T→A	5.7%	intergenic (+136/+257)	PP_0278 → / ← PP_0279	hypothetical protein/hypothetical protein
RA	336,292	T→A	5.7%	intergenic (+137/+256)	PP_0278 → / ← PP_0279	hypothetical protein/hypothetical protein
RA	336,293	T→A	5.7%	intergenic (+138/+255)	PP_0278 → / ← PP_0279	hypothetical protein/hypothetical protein
RA	337,812	A→G	28.8%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	28.8%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	30.0%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	28.0%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	32.6%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	29.6%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	30.7%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	344,035	A→G	5.3%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	7.1%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	6.9%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	353,088	A→C	8.0%	intergenic (+52/+66)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	353,105	T→G	6.1%	intergenic (+69/+49)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	354,881	G→C	5.2%	V98V (GTC→GTG)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	358,088	A→G	23.7%	intergenic (+53/‑77)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,090	C→T	23.7%	intergenic (+55/‑75)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,093	T→C	24.8%	intergenic (+58/‑72)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,094	G→A	24.8%	intergenic (+59/‑71)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,097	A→G	24.3%	intergenic (+62/‑68)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,099	C→T	24.3%	intergenic (+64/‑66)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	384,786	C→G	5.4%	R421G (CGC→GGC)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,790	A→T	5.5%	N422I (AAT→ATT)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,794	C→G	5.4%	A423A (GCC→GCG)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	385,478	A→C	6.1%	intergenic (+15/+20)	PP_0320 → / ← ltaE	methyl‑accepting chemotaxis transducer/low specificity l‑threonine aldolase
RA	385,479	C→G	6.0%	intergenic (+16/+19)	PP_0320 → / ← ltaE	methyl‑accepting chemotaxis transducer/low specificity l‑threonine aldolase
RA	403,274	G→C	5.1%	intergenic (‑74/+95)	msrA ← / ← PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
RA	414,039	T→A	5.2%	intergenic (+56/‑147)	glnE → / → waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
RA	427,755	A→C	5.7%	L16R (CTG→CGG) ‡	PP_0350 ←	ferrichrome‑iron receptor
RA	427,756	G→T	5.7%	L16M (CTG→ATG) ‡	PP_0350 ←	ferrichrome‑iron receptor
RA	432,996	A→T	5.9%	intergenic (+18/+29)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,997	A→T	5.9%	intergenic (+19/+28)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,998	A→T	6.2%	intergenic (+20/+27)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	433,838	G→A	5.5%	N455N (AAC→AAT)	glcB ←	malate synthase G
RA	433,847	C→G	5.3%	V452V (GTG→GTC)	glcB ←	malate synthase G
RA	433,850	C→G	5.2%	V451V (GTG→GTC)	glcB ←	malate synthase G
RA	433,856	C→T	5.1%	E449E (GAG→GAA)	glcB ←	malate synthase G
RA	433,859	G→C	5.2%	A448A (GCC→GCG) ‡	glcB ←	malate synthase G
RA	433,860	G→T	5.0%	A448D (GCC→GAC) ‡	glcB ←	malate synthase G
RA	433,861	C→T	5.1%	A448T (GCC→ACC) ‡	glcB ←	malate synthase G
RA	433,865	T→A	5.0%	A446A (GCA→GCT)	glcB ←	malate synthase G
RA	433,868	C→G	5.0%	K445N (AAG→AAC) ‡	glcB ←	malate synthase G
RA	433,870	T→G	5.0%	K445Q (AAG→CAG) ‡	glcB ←	malate synthase G
RA	433,874	G→C	5.0%	C443W (TGC→TGG) ‡	glcB ←	malate synthase G
RA	433,875	C→G	5.0%	C443S (TGC→TCC) ‡	glcB ←	malate synthase G
RA	433,876	A→C	5.0%	C443G (TGC→GGC) ‡	glcB ←	malate synthase G
RA	433,877	G→T	5.1%	S442S (TCC→TCA) ‡	glcB ←	malate synthase G
RA	433,878	G→T	5.2%	S442Y (TCC→TAC) ‡	glcB ←	malate synthase G
RA	433,879	A→C	5.0%	S442A (TCC→GCC) ‡	glcB ←	malate synthase G
RA	433,889	G→A	5.1%	V438V (GTC→GTT)	glcB ←	malate synthase G
RA	433,898	A→G	5.2%	R435R (CGT→CGC)	glcB ←	malate synthase G
RA	445,078	T→G	7.4%	intergenic (+48/‑240)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,089	T→G	12.9%	intergenic (+59/‑229)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,090	G→A	11.0%	intergenic (+60/‑228)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,091	C→G	11.4%	intergenic (+61/‑227)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,093	T→C	16.6%	intergenic (+63/‑225)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,098	T→C	20.6%	intergenic (+68/‑220)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,108	A→T	22.3%	intergenic (+78/‑210)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,110	T→G	18.9%	intergenic (+80/‑208)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,118	G→A	18.6%	intergenic (+88/‑200)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,120	C→G	6.5%	intergenic (+90/‑198)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,123	G→A	13.6%	intergenic (+93/‑195)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,125	C→G	13.4%	intergenic (+95/‑193)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,126	T→C	13.9%	intergenic (+96/‑192)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,127	C→A	13.4%	intergenic (+97/‑191)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	471,069	T→C	6.8%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	7.0%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,528	G→C	5.4%	S470S (TCC→TCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,531	A→T	5.2%	I469I (ATT→ATA) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,532	A→G	5.3%	I469T (ATT→ACT) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,537	G→A	5.4%	N467N (AAC→AAT) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,538	T→A	5.4%	N467I (AAC→ATC) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,539	T→C	5.4%	N467D (AAC→GAC) ‡	rpoD ←	RNA polymerase sigma 70 factor
RA	471,542	G→T	5.4%	L466I (CTC→ATC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,555	C→T	7.1%	E461E (GAG→GAA)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,576	G→A	10.8%	R454R (CGC→CGT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,588	T→C	12.7%	A450A (GCA→GCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,594	G→A	12.9%	D448D (GAC→GAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,600	G→A	13.1%	I446I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,615	C→T	16.0%	A441A (GCG→GCA)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,624	G→A	18.7%	I438I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,633	G→T	18.4%	T435T (ACC→ACA)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,636	G→C	19.0%	A434A (GCC→GCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,657	G→A	19.9%	G427G (GGC→GGT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,660	G→A	19.9%	R426R (CGC→CGT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,666	G→A	20.5%	Y424Y (TAC→TAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,678	G→A	20.9%	D420D (GAC→GAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,681	C→G	21.1%	V419V (GTG→GTC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,687	T→C	20.4%	K417K (AAA→AAG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,702	G→A	19.5%	N412N (AAC→AAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,714	G→A	17.2%	I408I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,717	C→A	17.0%	L407L (CTG→CTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,720	G→A	17.0%	D406D (GAC→GAT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,732	C→A	14.8%	L402L (CTG→CTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,759	G→A	12.5%	I393I (ATC→ATT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,762	G→C	12.1%	S392S (TCC→TCG)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,765	A→G	11.8%	I391I (ATT→ATC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,768	C→A	9.8%	V390V (GTG→GTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,771	C→G	7.4%	L389L (CTG→CTC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,777	C→A	6.7%	L387L (CTG→CTT)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,783	C→G	6.1%	A385A (GCG→GCC)	rpoD ←	RNA polymerase sigma 70 factor
RA	471,786	C→T	5.2%	E384E (GAG→GAA)	rpoD ←	RNA polymerase sigma 70 factor
RA	503,828	Δ1 bp	12.2%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,834	A→T	13.3%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,835	A→T	13.7%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,840:1	+C	11.8%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	524,174	C→G	6.7%	intergenic (+38/‑778)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,339	A→G	5.2%	intergenic (+203/‑613)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	10.4%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	10.5%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	532,618	G→A	5.2%	noncoding (34/76 nt)	PP_t03 →	tRNA‑Thr
RA	532,619	G→C	5.2%	noncoding (35/76 nt)	PP_t03 →	tRNA‑Thr
RA	532,620	T→C	5.1%	noncoding (36/76 nt)	PP_t03 →	tRNA‑Thr
RA	541,375	G→C	8.5%	L1250L (CTG→CTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,376	A→C	8.8%	N1251H (AAC→CAC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,382	T→C	8.3%	L1253L (TTG→CTG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,387	G→C	10.9%	V1254V (GTG→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,399	G→C	10.6%	M1258I (ATG→ATC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,402	C→T	11.2%	H1259H (CAC→CAT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,405	G→T	10.7%	A1260A (GCG→GCT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,411	C→G	10.5%	S1262S (TCC→TCG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,413	C→T	10.4%	T1263I (ACT→ATT) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,414	T→C	10.4%	T1263T (ACT→ACC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,417	T→A	10.6%	G1264G (GGT→GGA)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,418	T→C	10.3%	S1265P (TCC→CCC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,420	C→T	10.4%	S1265S (TCC→TCT) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,424	A→T	10.0%	S1267C (AGC→TGC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,425	G→C	10.0%	S1267T (AGC→ACC) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,426	C→G	10.0%	S1267R (AGC→AGG) ‡	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,429	G→C	10.4%	L1268L (CTG→CTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,432	T→C	10.7%	V1269V (GTT→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,440	A→G	5.7%	Q1272R (CAG→CGG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,443	C→T	5.6%	P1273L (CCG→CTG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,447	G→C	11.5%	L1274L (CTG→CTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,477	T→C	11.6%	R1284R (CGT→CGC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,483	G→C	12.1%	G1286G (GGG→GGC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,486	G→A	11.0%	E1287E (GAG→GAA)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,492	A→G	9.8%	E1289E (GAA→GAG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,495	G→C	9.9%	V1290V (GTG→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,501	G→T	9.8%	A1292A (GCG→GCT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,513	C→T	7.4%	Y1296Y (TAC→TAT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,516	C→T	5.7%	G1297G (GGC→GGT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	542,021	G→A	5.0%	E86E (GAG→GAA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,516	G→T	5.4%	P251P (CCG→CCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,528	G→C	10.0%	L255L (CTG→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,534	T→C	11.5%	G257G (GGT→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,537	C→T	11.2%	G258G (GGC→GGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,543	C→T	11.9%	F260F (TTC→TTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,546	G→T	11.9%	A261A (GCG→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,549	T→A	11.9%	T262T (ACT→ACA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,555	C→T	13.1%	D264D (GAC→GAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,558	G→C	13.1%	L265L (CTG→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,567	G→T	14.1%	L268L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,570	T→C	14.1%	Y269Y (TAT→TAC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,573	C→T	13.8%	R270R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,576	G→T	13.8%	R271R (CGG→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,606	C→T	17.4%	R281R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,609	G→T	17.3%	L282L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,610	C→A	17.3%	L283M (CTG→ATG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,612	G→T	17.3%	L283L (CTG→CTT) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,615	T→A	16.5%	D284E (GAT→GAA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,619	T→C	16.3%	S286P (TCG→CCG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,620	C→G	16.7%	S286W (TCG→TGG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,621	G→C	16.7%	S286S (TCG→TCC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,624	G→T	16.8%	A287A (GCG→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,627	G→T	17.1%	P288P (CCG→CCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,629	A→G	17.2%	D289G (GAC→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,636	C→T	17.1%	I291I (ATC→ATT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,637	G→A	16.4%	V292M (GTG→ATG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,639	G→C	16.5%	V292V (GTG→GTC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,642	C→T	16.7%	R293R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,654	C→T	18.3%	R297R (CGC→CGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,658	C→T	17.0%	L299L (CTG→TTG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,669	G→T	13.4%	A302A (GCG→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,678	T→G	16.0%	A305A (GCT→GCG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,682	C→T	15.3%	L307L (CTG→TTG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,684	G→C	15.4%	L307L (CTG→CTC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,687	C→T	15.1%	D308D (GAC→GAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,702	T→C	14.5%	G313G (GGT→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,707	C→T	13.3%	A315V (GCC→GTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,714	T→C	13.3%	T317T (ACT→ACC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,717	C→T	13.2%	G318G (GGC→GGT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,718	T→G	13.2%	S319A (TCG→GCG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,720	G→T	13.3%	S319S (TCG→TCT) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,741	C→G	9.1%	S326S (TCC→TCG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,744	G→C	8.4%	L327L (CTG→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,745	G→T	8.2%	A328S (GCC→TCC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,754	A→C	8.8%	I331L (ATC→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,759	A→G	8.6%	K332K (AAA→AAG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,768	A→G	7.7%	Q335Q (CAA→CAG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,787	T→C	6.5%	L342L (TTG→CTG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,789	G→T	6.6%	L342F (TTG→TTT) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,801	T→C	5.2%	R346R (CGT→CGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,804	T→C	5.2%	V347V (GTT→GTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	542,810	C→T	5.0%	Y349Y (TAC→TAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,059	G→T	5.9%	L432L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,065	C→T	8.3%	I434I (ATC→ATT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,071	G→A	10.7%	A436A (GCG→GCA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,074	T→C	10.9%	F437F (TTT→TTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,081	G→A	10.9%	V440I (GTA→ATA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,082	T→C	11.0%	V440A (GTA→GCA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,083	A→G	11.0%	V440V (GTA→GTG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,095	T→C	11.7%	G444G (GGT→GGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,101	T→C	12.1%	A446A (GCT→GCC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,113	C→T	12.3%	H450H (CAC→CAT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,119	G→C	12.6%	L452L (CTG→CTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,126	G→A	13.5%	A455T (GCT→ACT) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,128	T→A	13.2%	A455A (GCT→GCA) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,133	A→T	14.6%	Y457F (TAC→TTC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,140	C→T	14.5%	A459A (GCC→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,164	C→T	14.3%	A467A (GCC→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,173	G→T	14.0%	V470V (GTG→GTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,176	G→T	13.1%	P471P (CCG→CCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,180	A→T	12.0%	T473S (ACC→TCC) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,182	C→G	12.2%	T473T (ACC→ACG) ‡	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,185	G→T	12.3%	L474L (CTG→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,191	C→T	12.3%	A476A (GCC→GCT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,197	C→T	11.2%	L478L (CTC→CTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,203	G→A	7.5%	A480A (GCG→GCA)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,206	T→C	7.2%	R481R (CGT→CGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,208	C→T	7.5%	A482V (GCG→GTG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	546,005	G→A	6.8%	intergenic (+42/‑31)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	549,644	T→G	10.1%	C106G (TGC→GGC) ‡	tufB →	elongation factor Tu‑B
RA	549,645	G→T	10.1%	C106F (TGC→TTC) ‡	tufB →	elongation factor Tu‑B
RA	549,646	C→T	10.1%	C106C (TGC→TGT) ‡	tufB →	elongation factor Tu‑B
RA	549,652	C→A	11.1%	A108A (GCC→GCA)	tufB →	elongation factor Tu‑B
RA	549,655	C→T	12.3%	A109A (GCC→GCT)	tufB →	elongation factor Tu‑B
RA	549,658	T→C	12.3%	D110D (GAT→GAC)	tufB →	elongation factor Tu‑B
RA	549,661	T→C	12.6%	G111G (GGT→GGC)	tufB →	elongation factor Tu‑B
RA	549,670	G→A	13.8%	P114P (CCG→CCA)	tufB →	elongation factor Tu‑B
RA	549,673	A→G	15.4%	Q115Q (CAA→CAG)	tufB →	elongation factor Tu‑B
RA	549,694	G→C	18.3%	L122L (CTG→CTC)	tufB →	elongation factor Tu‑B
RA	549,695	T→G	17.6%	S123A (TCC→GCC) ‡	tufB →	elongation factor Tu‑B
RA	549,697	C→T	17.6%	S123S (TCC→TCT) ‡	tufB →	elongation factor Tu‑B
RA	549,706	A→T	18.0%	V126V (GTA→GTT)	tufB →	elongation factor Tu‑B
RA	549,715	G→T	17.0%	P129P (CCG→CCT)	tufB →	elongation factor Tu‑B
RA	549,716	T→G	17.8%	Y130D (TAC→GAC) ‡	tufB →	elongation factor Tu‑B
RA	549,717	A→C	17.8%	Y130S (TAC→TCC) ‡	tufB →	elongation factor Tu‑B
RA	549,718	C→G	17.1%	Y130* (TAC→TAG) ‡	tufB →	elongation factor Tu‑B
RA	549,724	G→C	18.6%	V132V (GTG→GTC)	tufB →	elongation factor Tu‑B
RA	549,727	C→G	18.5%	V133V (GTC→GTG)	tufB →	elongation factor Tu‑B
RA	549,740	G→T	17.7%	A138S (GCC→TCC) ‡	tufB →	elongation factor Tu‑B
RA	549,741	C→G	17.6%	A138G (GCC→GGC) ‡	tufB →	elongation factor Tu‑B
RA	549,745	C→T	16.6%	D139D (GAC→GAT)	tufB →	elongation factor Tu‑B
RA	549,747	T→A	17.8%	L140Q (CTG→CAG)	tufB →	elongation factor Tu‑B
RA	549,751	A→T	17.5%	V141V (GTA→GTT)	tufB →	elongation factor Tu‑B
RA	549,757	C→T	18.2%	D143D (GAC→GAT)	tufB →	elongation factor Tu‑B
RA	549,763	G→A	12.7%	E145E (GAG→GAA)	tufB →	elongation factor Tu‑B
RA	549,766	G→T	12.1%	L146L (CTG→CTT)	tufB →	elongation factor Tu‑B
RA	549,769	G→C	12.8%	L147L (CTG→CTC)	tufB →	elongation factor Tu‑B
RA	549,775	G→C	10.1%	L149L (CTG→CTC)	tufB →	elongation factor Tu‑B
RA	549,778	C→A	10.3%	V150V (GTC→GTA)	tufB →	elongation factor Tu‑B
RA	549,781	G→A	9.9%	E151E (GAG→GAA)	tufB →	elongation factor Tu‑B
RA	549,782	A→C	9.8%	M152L (ATG→CTG) ‡	tufB →	elongation factor Tu‑B
RA	549,784	G→C	9.4%	M152I (ATG→ATC) ‡	tufB →	elongation factor Tu‑B
RA	549,796	C→A	7.2%	D156E (GAC→GAA)	tufB →	elongation factor Tu‑B
RA	549,802	G→T	7.1%	L158L (CTG→CTT)	tufB →	elongation factor Tu‑B
RA	550,552	C→G	8.6%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	554,501	G→C	8.3%	A146A (GCG→GCC)	rpsC →	30S ribosomal protein S3
RA	554,504	A→T	8.5%	V147V (GTA→GTT)	rpsC →	30S ribosomal protein S3
RA	554,508	A→T	8.4%	N149Y (AAC→TAC) ‡	rpsC →	30S ribosomal protein S3
RA	554,509	A→C	8.5%	N149T (AAC→ACC) ‡	rpsC →	30S ribosomal protein S3
RA	554,510	C→G	8.5%	N149K (AAC→AAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,513	C→A	8.6%	A150A (GCC→GCA)	rpsC →	30S ribosomal protein S3
RA	554,520	A→C	8.7%	I153L (ATT→CTT) ‡	rpsC →	30S ribosomal protein S3
RA	554,522	T→C	8.6%	I153I (ATT→ATC) ‡	rpsC →	30S ribosomal protein S3
RA	554,528	C→T	8.7%	A155A (GCC→GCT)	rpsC →	30S ribosomal protein S3
RA	554,529	A→G	8.9%	K156E (AAG→GAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,531	G→A	9.3%	K156K (AAG→AAA) ‡	rpsC →	30S ribosomal protein S3
RA	554,534	C→T	8.9%	G157G (GGC→GGT)	rpsC →	30S ribosomal protein S3
RA	554,538	A→C	8.9%	K159Q (AAG→CAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,539	A→G	9.0%	K159R (AAG→AGG) ‡	rpsC →	30S ribosomal protein S3
RA	554,540	G→T	9.2%	K159N (AAG→AAT) ‡	rpsC →	30S ribosomal protein S3
RA	554,544	C→A	9.1%	Q161K (CAG→AAG) ‡	rpsC →	30S ribosomal protein S3
RA	554,546	G→C	9.1%	Q161H (CAG→CAC) ‡	rpsC →	30S ribosomal protein S3
RA	554,547	G→T	9.0%	V162L (GTG→TTG) ‡	rpsC →	30S ribosomal protein S3
RA	554,548	T→G	9.1%	V162G (GTG→GGG) ‡	rpsC →	30S ribosomal protein S3
RA	554,549	G→C	9.1%	V162V (GTG→GTC) ‡	rpsC →	30S ribosomal protein S3
RA	554,550	A→T	9.3%	S163C (AGC→TGC) ‡	rpsC →	30S ribosomal protein S3
RA	554,551	G→C	9.3%	S163T (AGC→ACC) ‡	rpsC →	30S ribosomal protein S3
RA	554,561	C→T	10.7%	L166L (CTC→CTT)	rpsC →	30S ribosomal protein S3
RA	554,567	T→C	10.0%	G168G (GGT→GGC)	rpsC →	30S ribosomal protein S3
RA	554,573	G→A	11.6%	E170E (GAG→GAA)	rpsC →	30S ribosomal protein S3
RA	554,576	T→C	11.4%	I171I (ATT→ATC)	rpsC →	30S ribosomal protein S3
RA	554,579	T→A	11.4%	A172A (GCT→GCA)	rpsC →	30S ribosomal protein S3
RA	554,584	C→T	11.1%	T174I (ACC→ATC) ‡	rpsC →	30S ribosomal protein S3
RA	554,585	C→G	11.3%	T174T (ACC→ACG) ‡	rpsC →	30S ribosomal protein S3
RA	554,588	G→A	10.5%	E175E (GAG→GAA)	rpsC →	30S ribosomal protein S3
RA	554,606	T→C	7.8%	R181R (CGT→CGC)	rpsC →	30S ribosomal protein S3
RA	554,609	G→T	7.8%	V182V (GTG→GTT)	rpsC →	30S ribosomal protein S3
RA	554,612	T→G	6.1%	P183P (CCT→CCG)	rpsC →	30S ribosomal protein S3
RA	554,615	G→T	6.0%	L184L (CTG→CTT)	rpsC →	30S ribosomal protein S3
RA	554,621	C→G	5.5%	T186T (ACC→ACG)	rpsC →	30S ribosomal protein S3
RA	557,335	Δ1 bp	5.2%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	5.3%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	564,380:1	+A	7.0%	intergenic (+29/‑144)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,385	Δ1 bp	7.0%	intergenic (+34/‑139)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	566,623	C→T	7.0%	intergenic (+32/+41)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,627	A→G	6.9%	intergenic (+36/+37)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,628	T→A	7.2%	intergenic (+37/+36)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,629	C→T	7.2%	intergenic (+38/+35)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,633	A→G	7.6%	intergenic (+42/+31)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	648,290	A→C	11.0%	intergenic (+56/+35)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,292	A→T	7.2%	intergenic (+58/+33)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,294	G→T	6.8%	intergenic (+60/+31)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	655,063	G→A	5.8%	A428V (GCC→GTC)	PP_0563 ←	two‑component system response regulator
RA	655,070	T→C	5.2%	T426A (ACC→GCC)	PP_0563 ←	two‑component system response regulator
RA	668,074	T→G	17.5%	intergenic (+35/+117)	yfhM → / ← PP_0571	lipoprotein/membrane protein
RA	668,110	T→A	8.1%	intergenic (+71/+81)	yfhM → / ← PP_0571	lipoprotein/membrane protein
RA	681,295	G→A	5.5%	intergenic (+32/+37)	PP_0583 → / ← PP_0584	AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer
RA	681,296	G→T	9.1%	intergenic (+33/+36)	PP_0583 → / ← PP_0584	AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer
RA	681,298	T→A	6.5%	intergenic (+35/+34)	PP_0583 → / ← PP_0584	AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer
RA	681,299	A→C	5.9%	intergenic (+36/+33)	PP_0583 → / ← PP_0584	AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer
RA	681,300	T→C	8.1%	intergenic (+37/+32)	PP_0583 → / ← PP_0584	AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer
RA	697,217	T→C	6.3%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	9.1%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	9.3%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,242	G→A	6.2%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	50.1%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,767	T→G	7.6%	intergenic (+12/‑120)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,768	A→T	7.7%	intergenic (+13/‑119)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,769	C→A	7.5%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	709,998	T→G	13.5%	V247G (GTT→GGT)	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	713,099	A→G	5.6%	I29V (ATC→GTC) ‡	lspA →	lipoprotein signal peptidase
RA	713,100	T→A	5.7%	I29N (ATC→AAC) ‡	lspA →	lipoprotein signal peptidase
RA	713,101	C→T	5.6%	I29I (ATC→ATT) ‡	lspA →	lipoprotein signal peptidase
RA	718,461	T→A	12.2%	intergenic (+28/+49)	thiO → / ← PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
RA	732,425	A→C	8.5%	V654V (GTA→GTC)	clpB →	chaperone protein ClpB
RA	732,428	G→C	8.7%	G655G (GGG→GGC)	clpB →	chaperone protein ClpB
RA	732,440	C→T	9.1%	G659G (GGC→GGT)	clpB →	chaperone protein ClpB
RA	732,443	T→C	9.3%	G660G (GGT→GGC)	clpB →	chaperone protein ClpB
RA	732,444	T→G	9.7%	Y661D (TAC→GAC) ‡	clpB →	chaperone protein ClpB
RA	732,445	A→T	9.3%	Y661F (TAC→TTC) ‡	clpB →	chaperone protein ClpB
RA	732,446	C→T	9.4%	Y661Y (TAC→TAT) ‡	clpB →	chaperone protein ClpB
RA	732,452	C→G	12.1%	T663T (ACC→ACG)	clpB →	chaperone protein ClpB
RA	732,455	G→A	11.8%	E664E (GAG→GAA)	clpB →	chaperone protein ClpB
RA	732,458	C→T	11.9%	A665A (GCC→GCT)	clpB →	chaperone protein ClpB
RA	732,464	G→T	11.8%	R667R (CGG→CGT)	clpB →	chaperone protein ClpB
RA	732,469	A→G	11.7%	K669R (AAG→AGG) ‡	clpB →	chaperone protein ClpB
RA	732,470	G→A	11.7%	K669K (AAG→AAA) ‡	clpB →	chaperone protein ClpB
RA	732,473	T→A	11.9%	P670P (CCT→CCA)	clpB →	chaperone protein ClpB
RA	732,476	C→T	11.8%	Y671Y (TAC→TAT)	clpB →	chaperone protein ClpB
RA	732,477	T→C	11.8%	S672P (TCG→CCG) ‡	clpB →	chaperone protein ClpB
RA	732,478	C→A	11.8%	S672* (TCG→TAG) ‡	clpB →	chaperone protein ClpB
RA	732,483	G→A	12.5%	V674M (GTG→ATG) ‡	clpB →	chaperone protein ClpB
RA	732,485	G→C	14.4%	V674V (GTG→GTC) ‡	clpB →	chaperone protein ClpB
RA	732,489	C→T	14.3%	L676L (CTG→TTG) ‡	clpB →	chaperone protein ClpB
RA	732,491	G→C	14.2%	L676L (CTG→CTC) ‡	clpB →	chaperone protein ClpB
RA	732,494	C→T	13.2%	D677D (GAC→GAT)	clpB →	chaperone protein ClpB
RA	732,498	G→A	13.2%	V679M (GTG→ATG) ‡	clpB →	chaperone protein ClpB
RA	732,500	G→C	13.0%	V679V (GTG→GTC) ‡	clpB →	chaperone protein ClpB
RA	732,506	A→G	13.0%	K681K (AAA→AAG)	clpB →	chaperone protein ClpB
RA	732,509	C→G	12.5%	A682A (GCC→GCG)	clpB →	chaperone protein ClpB
RA	732,512	C→T	12.4%	H683H (CAC→CAT)	clpB →	chaperone protein ClpB
RA	732,534	T→C	12.4%	L691L (TTG→CTG)	clpB →	chaperone protein ClpB
RA	732,542	G→T	11.3%	V693V (GTG→GTT)	clpB →	chaperone protein ClpB
RA	732,545	G→T	10.0%	L694L (CTG→CTT)	clpB →	chaperone protein ClpB
RA	732,548	A→T	9.7%	E695D (GAA→GAT)	clpB →	chaperone protein ClpB
RA	732,554	C→T	8.2%	G697G (GGC→GGT)	clpB →	chaperone protein ClpB
RA	732,557	C→T	8.3%	R698R (CGC→CGT)	clpB →	chaperone protein ClpB
RA	733,648	A→T	6.5%	intergenic (+19/‑28)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,649	A→T	6.2%	intergenic (+20/‑27)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,650	A→T	6.9%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	735,613	A→G	5.9%	intergenic (‑36/+97)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,620	A→G	6.8%	intergenic (‑43/+90)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,621	C→T	6.7%	intergenic (‑44/+89)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,628	C→T	6.4%	intergenic (‑51/+82)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	743,433	G→A	6.2%	intergenic (+109/+165)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,435	A→C	6.4%	intergenic (+111/+163)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,442	T→G	5.9%	intergenic (+118/+156)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,443	T→A	6.0%	intergenic (+119/+155)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,444	C→A	5.6%	intergenic (+120/+154)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,451	G→T	6.9%	intergenic (+127/+147)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,453	T→C	5.6%	intergenic (+129/+145)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	772,181	T→C	5.6%	intergenic (+39/‑160)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,182	T→G	5.8%	intergenic (+40/‑159)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,185	C→A	5.6%	intergenic (+43/‑156)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,186	G→A	5.6%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	780,559	A→C	7.8%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	7.6%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	7.9%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	798,632	T→A	5.5%	L201Q (CTG→CAG)	fklB‑I →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	798,665	C→A	6.5%	intergenic (+17/+10)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,666	C→G	6.1%	intergenic (+18/+9)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,667	T→G	9.3%	intergenic (+19/+8)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	802,773	T→C	5.3%	intergenic (+28/‑58)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,774	C→A	5.6%	intergenic (+29/‑57)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,775	T→G	5.2%	intergenic (+30/‑56)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,776	G→A	5.2%	intergenic (+31/‑55)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	813,204	T→C	5.2%	intergenic (+108/+23)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	813,205	G→A	5.1%	intergenic (+109/+22)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	827,244	C→T	5.9%	N144N (AAC→AAT)	ycaC‑I →	putative hydrolase
RA	827,248	C→G	6.6%	L146V (CTG→GTG)	ycaC‑I →	putative hydrolase
RA	827,257	G→C	6.8%	D149H (GAC→CAC) ‡	ycaC‑I →	putative hydrolase
RA	827,259	C→T	6.8%	D149D (GAC→GAT) ‡	ycaC‑I →	putative hydrolase
RA	827,265	C→A	6.6%	A151A (GCC→GCA)	ycaC‑I →	putative hydrolase
RA	827,269	C→G	6.8%	R153G (CGA→GGA) ‡	ycaC‑I →	putative hydrolase
RA	827,270	G→A	6.8%	R153Q (CGA→CAA) ‡	ycaC‑I →	putative hydrolase
RA	827,271	A→C	6.7%	R153R (CGA→CGC) ‡	ycaC‑I →	putative hydrolase
RA	827,278	G→A	6.7%	E156K (GAG→AAG) ‡	ycaC‑I →	putative hydrolase
RA	827,280	G→T	6.7%	E156D (GAG→GAT) ‡	ycaC‑I →	putative hydrolase
RA	827,283	T→A	6.7%	A157A (GCT→GCA)	ycaC‑I →	putative hydrolase
RA	827,289	G→T	6.8%	G159G (GGG→GGT)	ycaC‑I →	putative hydrolase
RA	827,295	A→G	6.9%	Q161Q (CAA→CAG)	ycaC‑I →	putative hydrolase
RA	827,316	G→T	7.4%	V168V (GTG→GTT)	ycaC‑I →	putative hydrolase
RA	827,319	C→T	7.4%	A169A (GCC→GCT)	ycaC‑I →	putative hydrolase
RA	827,322	C→T	7.3%	C170C (TGC→TGT)	ycaC‑I →	putative hydrolase
RA	827,331	C→T	7.4%	H173H (CAC→CAT)	ycaC‑I →	putative hydrolase
RA	827,334	T→C	7.5%	R174R (CGT→CGC)	ycaC‑I →	putative hydrolase
RA	827,349	C→T	6.9%	D179D (GAC→GAT)	ycaC‑I →	putative hydrolase
RA	827,352	C→T	7.2%	I180I (ATC→ATT)	ycaC‑I →	putative hydrolase
RA	827,358	G→T	5.9%	G182G (GGG→GGT)	ycaC‑I →	putative hydrolase
RA	838,006	Δ1 bp	5.2%	intergenic (‑39/+41)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	838,010:1	+C	5.3%	intergenic (‑43/+37)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	867,936	G→A	6.1%	intergenic (+31/+146)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	867,937	C→T	6.1%	intergenic (+32/+145)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,054	G→T	5.9%	intergenic (+149/+28)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,055	A→C	7.1%	intergenic (+150/+27)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	876,018	G→C	5.7%	noncoding (105/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	876,021	G→C	5.7%	noncoding (102/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	883,866	A→C	11.6%	intergenic (+101/‑227)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	883,869	T→G	6.4%	intergenic (+104/‑224)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	895,210	G→C	5.0%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,213	G→C	6.3%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→A	6.3%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,222	G→C	5.2%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	900,539	T→G	6.6%	intergenic (+28/+17)	PP_0784 → / ← cysZ	hypothetical protein/sulfate transport protein CysZ
RA	932,603	G→A	5.6%	S4341L (TCG→TTG)	PP_0806 ←	surface adhesion protein
RA	951,932	A→T	6.7%	T254S (ACT→TCT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,935	G→C	6.4%	V255L (GTT→CTT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,940	C→T	6.5%	D256D (GAC→GAT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,952	C→T	6.7%	D260D (GAC→GAT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,959	A→T	7.2%	I263F (ATC→TTC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,970	C→T	8.4%	N266N (AAC→AAT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,973	G→T	8.3%	E267D (GAG→GAT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,974	C→G	8.6%	L268V (CTT→GTT) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,975	T→G	8.3%	L268R (CTT→CGT) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,979	T→C	8.5%	G269G (GGT→GGC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,982	G→C	8.4%	G270G (GGG→GGC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	951,985	C→T	8.4%	N271N (AAC→AAT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,006	G→C	8.6%	L278L (CTG→CTC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,007	T→A	8.4%	F279I (TTC→ATC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,013	G→A	8.4%	A281T (GCG→ACG) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,014	C→T	8.3%	A281V (GCG→GTG) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,015	G→C	8.3%	A281A (GCG→GCC) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,021	T→A	7.9%	G283G (GGT→GGA)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,027	T→G	7.9%	P285P (CCT→CCG)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,030	G→A	7.4%	E286E (GAG→GAA)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,033	T→C	7.1%	V287V (GTT→GTC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,036	C→T	5.5%	Y288Y (TAC→TAT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,039	C→T	5.8%	I289I (ATC→ATT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,043	A→G	5.8%	I291V (ATC→GTC) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,045	C→T	5.8%	I291I (ATC→ATT) ‡	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,051	G→T	5.1%	P293P (CCG→CCT)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	952,053	C→G	5.1%	A294G (GCC→GGC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	955,079	Δ1 bp	5.3%	intergenic (+30/‑283)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,083	T→A	5.4%	intergenic (+34/‑279)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,085:1	+G	5.4%	intergenic (+36/‑277)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,152	A→G	19.7%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,154	G→A	18.5%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	T→A	18.0%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,156	T→C	19.4%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158	C→T	18.9%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	956,586	G→T	5.8%	intergenic (+16/‑98)	alaC → / → PP_0818	aminotransferase/hypothetical protein
RA	961,702	A→T	5.3%	L239Q (CTG→CAG)	selD ←	selenide, water dikinase
RA	961,708	A→G	9.6%	V237A (GTC→GCC)	selD ←	selenide, water dikinase
RA	961,712	G→C	8.8%	L236V (CTG→GTG)	selD ←	selenide, water dikinase
RA	961,713	G→C	11.1%	H235Q (CAC→CAG)	selD ←	selenide, water dikinase
RA	961,717	C→T	9.3%	G234D (GGC→GAC)	selD ←	selenide, water dikinase
RA	961,723	A→T	8.0%	L232Q (CTG→CAG)	selD ←	selenide, water dikinase
RA	968,878	G→T	5.0%	intergenic (‑308/+23)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	968,881	A→C	6.2%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	972,118	T→A	5.5%	L136Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	972,121	T→A	5.5%	L137Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	981,260	C→G	5.2%	P45R (CCC→CGC)	hscA →	DnaK‑like molecular chaperone
RA	981,263	A→T	5.2%	D46V (GAC→GTC)	hscA →	DnaK‑like molecular chaperone
RA	981,266	C→G	5.3%	A47G (GCG→GGG)	hscA →	DnaK‑like molecular chaperone
RA	1,013,200	A→G	6.0%	intergenic (+25/+106)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,231	A→T	32.0%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,237	C→A	33.6%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	33.5%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	35.7%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	35.8%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	39.6%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	39.3%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	35.0%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,025,310	A→T	9.0%	intergenic (‑161/+68)	opdP ← / ← dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
RA	1,033,811	G→C	5.4%	R143P (CGG→CCG)	PP_0891 →	hypothetical protein
RA	1,033,816	T→A	5.2%	F145I (TTC→ATC)	PP_0891 →	hypothetical protein
RA	1,070,265	G→C	14.5%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	14.3%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,105,450	A→T	9.8%	intergenic (+211/‑76)	hisG → / → hisD	ATP phosphoribosyltransferase/histidinol dehydrogenase
RA	1,111,305	T→C	7.2%	intergenic (+21/‑89)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,111,310	G→T	7.3%	intergenic (+26/‑84)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,111,313	C→G	7.2%	intergenic (+29/‑81)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,111,315	T→A	7.0%	intergenic (+31/‑79)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,111,317	C→G	7.0%	intergenic (+33/‑77)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,111,320	A→C	6.8%	intergenic (+36/‑74)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,111,325	G→A	5.8%	intergenic (+41/‑69)	PP_0970 → / → PP_0971	cyanate MFS transporter/hypothetical protein
RA	1,114,900	G→C	7.7%	intergenic (‑89/+90)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,903	T→C	7.4%	intergenic (‑92/+87)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,905	G→C	7.7%	intergenic (‑94/+85)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,907	G→A	7.6%	intergenic (‑96/+83)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,907:1	+A	7.8%	intergenic (‑96/+83)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,912	G→C	7.3%	intergenic (‑101/+78)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,917	T→C	7.4%	intergenic (‑106/+73)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,918	Δ1 bp	7.3%	intergenic (‑107/+72)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,920	G→C	7.5%	intergenic (‑109/+70)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,922	G→A	7.5%	intergenic (‑111/+68)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,114,925	G→C	7.2%	intergenic (‑114/+65)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,126,656	T→G	8.6%	intergenic (‑105/+45)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,130,144	G→T	8.3%	intergenic (‑193/+111)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,145	C→G	8.5%	intergenic (‑194/+110)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,146	A→C	8.6%	intergenic (‑195/+109)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,198	A→T	6.5%	intergenic (‑247/+57)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,145,439	C→T	14.0%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	13.6%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	13.8%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	12.9%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,149,918	T→C	5.1%	intergenic (‑159/+98)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,149,921	C→G	5.8%	intergenic (‑162/+95)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,156,401	G→A	11.1%	intergenic (+98/‑118)	PP_1013 → / → yihS	sensor histidine kinase/aldose‑ketose isomerase
RA	1,178,757	T→A	6.3%	intergenic (+56/+38)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,758	G→T	6.5%	intergenic (+57/+37)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,759	A→C	6.5%	intergenic (+58/+36)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,760	T→A	6.4%	intergenic (+59/+35)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,184,591	G→C	14.8%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	14.9%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,611	C→T	7.7%	intergenic (‑221/‑191)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,210,834	T→A	7.6%	intergenic (+18/+19)	ytnA → / ← PP_1060	amino acid permease YtnA/glutamate synthase large subunit
RA	1,210,835	T→A	7.8%	intergenic (+19/+18)	ytnA → / ← PP_1060	amino acid permease YtnA/glutamate synthase large subunit
RA	1,226,713	T→A	5.1%	intergenic (‑217/‑114)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,226,716	T→A	5.1%	intergenic (‑220/‑111)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,233,773	A→C	5.7%	intergenic (‑83/+19)	glpR ← / ← glpK	DNA‑binding transcriptional repressor GlpR/glycerol kinase
RA	1,233,774	T→A	5.8%	intergenic (‑84/+18)	glpR ← / ← glpK	DNA‑binding transcriptional repressor GlpR/glycerol kinase
RA	1,233,775	G→T	6.3%	intergenic (‑85/+17)	glpR ← / ← glpK	DNA‑binding transcriptional repressor GlpR/glycerol kinase
RA	1,236,974	G→A	7.2%	intergenic (+7/+31)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,236,982	C→T	8.8%	intergenic (+15/+23)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,236,983	A→T	8.4%	intergenic (+16/+22)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,236,984	A→G	8.5%	intergenic (+17/+21)	ybaK → / ← PP_1078	Cys‑tRNAPro deacylase/ABC transporter ATP‑binding protein
RA	1,239,106	G→T	5.6%	intergenic (‑75/‑300)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,241,968:1	+T	7.1%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,973	Δ1 bp	7.2%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,249,757	C→G	5.3%	intergenic (+24/+47)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,759	A→T	5.4%	intergenic (+26/+45)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,275,090	G→C	5.6%	intergenic (‑281/+31)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,286,864	A→T	5.1%	K81* (AAG→TAG)	PP_1125 →	putative Helicase
RA	1,294,120	C→T	7.0%	intergenic (+15/+25)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,121	A→T	6.8%	intergenic (+16/+24)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,122	A→G	6.8%	intergenic (+17/+23)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,295,019	Δ1 bp	8.1%	intergenic (+29/+41)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,024	T→A	8.6%	intergenic (+34/+36)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,027	T→A	8.6%	intergenic (+37/+33)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,031:1	+T	8.5%	intergenic (+41/+29)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,311,748	G→A	6.3%	intergenic (‑210/+68)	PP_1144 ← / ← rapA	membrane protein/RNA polymerase‑associated protein RapA
RA	1,327,127	C→T	51.9%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,344,106	G→T	5.3%	P13T (CCT→ACT)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,113	G→C	5.6%	A10A (GCC→GCG) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,114	G→C	5.6%	A10G (GCC→GGC) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,121	A→C	5.4%	C8G (TGC→GGC)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,348,783	C→T	13.2%	intergenic (‑243/+511)	galP‑I ← / ← PP_1174	porin‑like protein/hypothetical protein
RA	1,348,789	A→G	48.6%	intergenic (‑249/+505)	galP‑I ← / ← PP_1174	porin‑like protein/hypothetical protein
RA	1,356,030	T→C	5.1%	intergenic (+291/‑101)	PP_1180 → / → PP_1181	hypothetical protein/two‑component system response regulator
RA	1,356,036	A→G	6.5%	intergenic (+297/‑95)	PP_1180 → / → PP_1181	hypothetical protein/two‑component system response regulator
RA	1,356,041	C→G	6.6%	intergenic (+302/‑90)	PP_1180 → / → PP_1181	hypothetical protein/two‑component system response regulator
RA	1,356,046	G→C	6.5%	intergenic (+307/‑85)	PP_1180 → / → PP_1181	hypothetical protein/two‑component system response regulator
RA	1,356,049	C→T	6.5%	intergenic (+310/‑82)	PP_1180 → / → PP_1181	hypothetical protein/two‑component system response regulator
RA	1,356,055	G→A	6.2%	intergenic (+316/‑76)	PP_1180 → / → PP_1181	hypothetical protein/two‑component system response regulator
RA	1,356,411	G→C	5.7%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,364,664	A→T	5.2%	intergenic (+28/+121)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,665	A→T	5.1%	intergenic (+29/+120)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,666	A→T	5.5%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,376,327	A→T	12.8%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	12.9%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	13.2%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,380,728	G→T	5.0%	intergenic (‑110/+25)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,382,332	A→T	5.4%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
RA	1,383,260	A→T	9.7%	L16Q (CTG→CAG)	PP_1204 ←	lipoprotein
RA	1,392,047	C→G	5.0%	intergenic (+72/‑43)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,921	T→C	12.1%	intergenic (+85/‑101)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,923	A→G	12.3%	intergenic (+87/‑99)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,925	G→A	12.8%	intergenic (+89/‑97)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,927:1	+A	11.8%	intergenic (+91/‑95)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,933	C→G	14.5%	intergenic (+97/‑89)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,939	Δ1 bp	12.6%	intergenic (+103/‑83)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,942	T→C	12.7%	intergenic (+106/‑80)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,944	C→T	13.1%	intergenic (+108/‑78)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,946	G→A	13.0%	intergenic (+110/‑76)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,403,596	G→A	20.6%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	21.1%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,409,124	A→T	11.8%	intergenic (+62/‑213)	PP_1230 → / → nadA	hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit
RA	1,414,217	G→A	7.0%	S86S (AGC→AGT) ‡	PP_1236 ←	glycine cleavage system transcriptional repressor
RA	1,414,218	C→G	7.5%	S86T (AGC→ACC) ‡	PP_1236 ←	glycine cleavage system transcriptional repressor
RA	1,414,219	T→C	7.0%	S86G (AGC→GGC) ‡	PP_1236 ←	glycine cleavage system transcriptional repressor
RA	1,416,868	G→A	6.0%	R37Q (CGG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,874	T→A	6.1%	L39Q (CTG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,880	T→C	6.5%	L41P (CTG→CCG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,458,124	T→G	10.0%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,126	A→T	10.1%	intergenic (+19/+21)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,128	C→A	10.3%	intergenic (+21/+19)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,464,198	T→G	9.3%	Q476P (CAG→CCG)	algX ←	alginate biosynthesis protein AlgX
RA	1,464,207	T→G	10.0%	Q473P (CAG→CCG)	algX ←	alginate biosynthesis protein AlgX
RA	1,471,402	G→T	5.1%	R478R (CGG→AGG)	alg8 ←	glycosyltransferase Alg8
RA	1,471,405	A→C	5.1%	S477A (TCG→GCG)	alg8 ←	glycosyltransferase Alg8
RA	1,475,002	T→G	10.0%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,475,003	C→A	9.6%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,486,568	G→A	6.7%	A114A (GCG→GCA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,574	G→C	6.0%	M116I (ATG→ATC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,580	G→A	12.6%	V118V (GTG→GTA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,593	C→A	13.3%	R123R (CGG→AGG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,594	G→A	13.5%	R123Q (CGG→CAG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,596	C→A	13.6%	R124S (CGC→AGC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,597	G→A	13.6%	R124H (CGC→CAC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,598	C→G	13.5%	R124R (CGC→CGG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,604	C→G	15.9%	A126A (GCC→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,607	G→A	15.9%	E127E (GAG→GAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,613	T→C	18.5%	I129I (ATT→ATC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,622	C→T	21.6%	H132H (CAC→CAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,625	C→T	21.0%	Y133Y (TAC→TAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,630	A→C	20.7%	E135A (GAG→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,634	T→C	21.2%	R136R (CGT→CGC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,638	C→A	20.7%	R138R (CGG→AGG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,639	G→A	20.1%	R138Q (CGG→CAG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,640	G→A	20.1%	R138R (CGG→CGA) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,649	G→A	27.6%	E141E (GAG→GAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,655	A→C	29.0%	A143A (GCA→GCC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,656	C→A	28.4%	H144N (CAC→AAC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,661	G→A	33.5%	K145K (AAG→AAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,664	C→T	33.6%	Y146Y (TAC→TAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,667	T→G	32.4%	P147P (CCT→CCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,674	T→C	34.3%	L150L (TTG→CTG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,676	G→T	33.9%	L150F (TTG→TTT) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,679	T→A	33.9%	S151S (TCT→TCA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,703	C→G	39.9%	A159A (GCC→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,712	C→T	42.5%	R162R (CGC→CGT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,716	T→C	39.9%	L164L (TTG→CTG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,718	G→T	39.2%	L164F (TTG→TTT) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,727	G→C	38.8%	K167N (AAG→AAC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,730	C→G	39.9%	P168P (CCC→CCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,734	A→G	39.4%	I170V (ATC→GTC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,763	A→G	38.4%	A179A (GCA→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,766	G→C	42.3%	L180L (CTG→CTC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,769	C→T	36.3%	D181D (GAC→GAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,793	C→G	36.7%	L189L (CTC→CTG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,799	C→G	38.7%	T191T (ACC→ACG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,806	G→A	31.4%	G194S (GGC→AGC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,808	C→T	30.6%	G194G (GGC→GGT) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,811	G→T	31.2%	L195L (CTG→CTT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,817	G→T	29.0%	E197D (GAG→GAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,820	T→A	29.4%	D198E (GAT→GAA)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,833	C→A	27.7%	L203I (CTC→ATC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,838	C→T	24.5%	C204C (TGC→TGT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,844	C→G	25.1%	T206T (ACC→ACG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,862	C→G	19.5%	A212A (GCC→GCG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,866	A→C	14.5%	T214P (ACC→CCC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,867	C→A	15.2%	T214N (ACC→AAC) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,868	C→G	15.2%	T214T (ACC→ACG) ‡	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,871	G→T	14.5%	V215V (GTG→GTT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,874	G→C	14.8%	A216A (GCG→GCC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,877	C→T	14.9%	N217N (AAC→AAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,880	G→T	14.6%	R218R (CGG→CGT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,883	T→G	14.6%	V219V (GTT→GTG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,895	C→T	11.0%	D223D (GAC→GAT)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,896	A→C	11.3%	K224Q (AAG→CAG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,902	G→C	6.3%	E226Q (GAG→CAG)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,486,907	T→C	6.4%	I227I (ATT→ATC)	yhdZ →	amino acid ABC transporter ATP‑binding protein
RA	1,487,046	A→T	6.3%	intergenic (+55/+75)	yhdZ → / ← degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
RA	1,488,064	T→A	8.0%	K89M (AAG→ATG) ‡	degS ←	serine endoprotease DegS
RA	1,488,065	T→A	8.4%	K89* (AAG→TAG) ‡	degS ←	serine endoprotease DegS
RA	1,488,073	T→A	6.8%	Y86F (TAC→TTC)	degS ←	serine endoprotease DegS
RA	1,497,841	T→G	5.4%	M141R (ATG→AGG)	PP_1310 →	hypothetical protein
RA	1,504,076	T→A	6.0%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,077	T→A	5.8%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,932	A→G	14.0%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,936	G→A	17.0%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	17.1%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	16.5%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	9.9%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,088	G→T	10.0%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	10.0%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	10.0%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,526,622	T→A	7.0%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,631	A→C	5.9%	E259A (GAA→GCA)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,534,921	G→A	12.7%	intergenic (+70/‑113)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,923	T→G	13.1%	intergenic (+72/‑111)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,925	C→T	13.1%	intergenic (+74/‑109)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,931	T→C	14.6%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,935	C→T	15.0%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,940	A→G	15.2%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,944	G→A	15.6%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,950	A→G	13.0%	intergenic (+99/‑84)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,952	C→A	12.1%	intergenic (+101/‑82)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,954	T→C	12.6%	intergenic (+103/‑80)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,961	G→A	7.7%	intergenic (+110/‑73)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,544,531	C→A	33.8%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	31.0%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	30.9%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	30.5%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	33.7%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	33.9%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,549,801	C→T	9.7%	G53G (GGC→GGT)	groL →	chaperonin GroEL
RA	1,549,804	T→A	9.7%	V54V (GTT→GTA)	groL →	chaperonin GroEL
RA	1,549,807	C→G	9.7%	S55S (TCC→TCG)	groL →	chaperonin GroEL
RA	1,549,810	C→T	9.7%	V56V (GTC→GTT)	groL →	chaperonin GroEL
RA	1,549,816	A→G	9.5%	K58K (AAA→AAG)	groL →	chaperonin GroEL
RA	1,549,825	G→A	9.4%	E61E (GAG→GAA)	groL →	chaperonin GroEL
RA	1,549,829	A→G	9.5%	K63E (AAA→GAA)	groL →	chaperonin GroEL
RA	1,549,835	G→A	9.3%	A65T (GCT→ACT) ‡	groL →	chaperonin GroEL
RA	1,549,836	C→A	8.6%	A65D (GCT→GAT) ‡	groL →	chaperonin GroEL
RA	1,549,837	T→G	10.0%	A65A (GCT→GCG) ‡	groL →	chaperonin GroEL
RA	1,549,855	C→A	14.3%	A71A (GCC→GCA)	groL →	chaperonin GroEL
RA	1,549,859	C→A	13.9%	L73M (CTG→ATG)	groL →	chaperonin GroEL
RA	1,549,862	G→C	14.0%	V74L (GTC→CTC) ‡	groL →	chaperonin GroEL
RA	1,549,864	C→G	14.2%	V74V (GTC→GTG) ‡	groL →	chaperonin GroEL
RA	1,549,865	A→C	14.6%	K75Q (AAG→CAG) ‡	groL →	chaperonin GroEL
RA	1,549,866	A→G	14.3%	K75R (AAG→AGG) ‡	groL →	chaperonin GroEL
RA	1,549,867	G→C	13.9%	K75N (AAG→AAC) ‡	groL →	chaperonin GroEL
RA	1,549,873	T→G	14.3%	V77V (GTT→GTG)	groL →	chaperonin GroEL
RA	1,549,879	C→G	14.5%	S79S (TCC→TCG)	groL →	chaperonin GroEL
RA	1,549,883	G→A	14.6%	A81T (GCC→ACC)	groL →	chaperonin GroEL
RA	1,549,892	G→A	15.1%	A84T (GCT→ACT)	groL →	chaperonin GroEL
RA	1,549,915	C→T	14.1%	T91T (ACC→ACT)	groL →	chaperonin GroEL
RA	1,549,918	T→G	12.2%	A92A (GCT→GCG)	groL →	chaperonin GroEL
RA	1,549,927	G→C	11.2%	L95L (CTG→CTC)	groL →	chaperonin GroEL
RA	1,549,929	C→G	11.2%	A96G (GCT→GGT)	groL →	chaperonin GroEL
RA	1,549,936	C→T	10.2%	A98A (GCC→GCT)	groL →	chaperonin GroEL
RA	1,549,942	C→T	9.6%	V100V (GTC→GTT)	groL →	chaperonin GroEL
RA	1,549,952	C→G	5.1%	L104V (CTG→GTG) ‡	groL →	chaperonin GroEL
RA	1,549,953	T→C	5.1%	L104P (CTG→CCG) ‡	groL →	chaperonin GroEL
RA	1,549,957	A→G	5.0%	K105K (AAA→AAG)	groL →	chaperonin GroEL
RA	1,549,963	C→T	5.1%	V107V (GTC→GTT)	groL →	chaperonin GroEL
RA	1,549,966	T→C	5.2%	A108A (GCT→GCC)	groL →	chaperonin GroEL
RA	1,549,969	C→T	5.2%	A109A (GCC→GCT)	groL →	chaperonin GroEL
RA	1,549,981	G→A	5.1%	P113P (CCG→CCA)	groL →	chaperonin GroEL
RA	1,551,324	G→T	8.1%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	7.8%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,555,430	A→C	7.2%	intergenic (+26/+48)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,431	T→A	6.7%	intergenic (+27/+47)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,432	G→T	6.8%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,570,480	A→C	8.3%	intergenic (+46/‑142)	pcaF‑I → / → pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
RA	1,592,024	C→A	13.4%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	13.3%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,647	A→C	13.2%	D67A (GAC→GCC)	PP_1397 →	hypothetical protein
RA	1,598,870	A→G	6.2%	intergenic (‑67/+64)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,873	C→G	6.0%	intergenic (‑70/+61)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,874	T→C	6.0%	intergenic (‑71/+60)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,875	G→A	5.9%	intergenic (‑72/+59)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,876	C→G	5.9%	intergenic (‑73/+58)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,879	C→T	5.9%	intergenic (‑76/+55)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,620,389	G→C	5.4%	intergenic (‑113/‑88)	opdH ← / → tctD	tricarboxylate‑specific outer membrane porin/transcriptional regulator TctD
RA	1,620,390	C→G	5.4%	intergenic (‑114/‑87)	opdH ← / → tctD	tricarboxylate‑specific outer membrane porin/transcriptional regulator TctD
RA	1,620,391	G→C	5.4%	intergenic (‑115/‑86)	opdH ← / → tctD	tricarboxylate‑specific outer membrane porin/transcriptional regulator TctD
RA	1,625,249	G→T	5.6%	intergenic (+30/+27)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,625,250	A→C	12.4%	intergenic (+31/+26)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,632,135	C→T	5.0%	P283S (CCT→TCT)	lepA →	elongation factor 4
RA	1,637,349	A→G	6.0%	intergenic (+16/+50)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,351	C→T	5.1%	intergenic (+18/+48)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,357	T→C	12.0%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,367	A→T	18.0%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	17.8%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	13.1%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,384	A→G	7.9%	intergenic (+51/+15)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,386	C→T	7.2%	intergenic (+53/+13)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,394	G→A	5.4%	intergenic (+61/+5)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,607	A→G	11.7%	intergenic (‑155/‑156)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,617	C→T	13.6%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,618	G→T	14.8%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	13.6%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,623	T→C	13.8%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	12.9%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,628	A→G	13.2%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,638	C→T	11.7%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	6.5%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	9.7%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,319	G→C	8.5%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,320	C→G	8.4%	intergenic (‑106/+46)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,321	G→C	8.4%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,327	G→C	8.4%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	5.3%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,648,991	G→A	5.1%	intergenic (‑228/+68)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,004	T→A	7.2%	intergenic (‑241/+55)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,009	T→G	5.4%	intergenic (‑246/+50)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,663,117	A→T	5.1%	intergenic (+21/+17)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,683,290	C→G	6.9%	intergenic (+57/‑174)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,683,293	C→G	6.5%	intergenic (+60/‑171)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,691,814	T→C	8.6%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,815	C→G	9.0%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	10.5%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	10.0%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,838	C→G	6.1%	intergenic (+63/‑108)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,839	G→A	6.2%	intergenic (+64/‑107)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,703,290	A→G	24.5%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	23.1%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	23.2%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,321	G→A	7.6%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,326	A→G	6.4%	intergenic (+133/‑34)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,328	C→T	5.9%	intergenic (+135/‑32)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,704,678	T→A	6.7%	M1M (TTG→ATG) †	PP_1499 →	hypothetical protein
RA	1,707,269	G→C	6.9%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,272	G→C	6.9%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,712,993	T→A	10.2%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	9.5%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,726,527	A→T	5.4%	L560Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,726,530	A→T	5.4%	L559Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,728,698	A→G	5.0%	intergenic (+50/+73)	cspA‑I → / ← PP_1523	major cold shock protein/hypothetical protein
RA	1,731,570	G→C	5.2%	P781R (CCG→CGG)	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,780,128	T→A	18.9%	intergenic (+45/+61)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,135	C→A	8.6%	intergenic (+52/+54)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,136	G→T	8.1%	intergenic (+53/+53)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,137	C→T	10.6%	intergenic (+54/+52)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,139	T→C	7.9%	intergenic (+56/+50)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,140	G→A	8.3%	intergenic (+57/+49)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,142	A→G	7.7%	intergenic (+59/+47)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,143	A→C	8.5%	intergenic (+60/+46)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,144	T→G	10.0%	intergenic (+61/+45)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,171	T→C	6.5%	intergenic (+88/+18)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,786,064	T→A	7.6%	intergenic (+38/‑148)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,065	T→A	7.5%	intergenic (+39/‑147)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,066	T→A	7.6%	intergenic (+40/‑146)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,810,377	T→G	11.5%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	8.5%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,821,017	Δ1 bp	100%	coding (738/1422 nt)	PP_1624 →	group II intron‑encoding maturase
RA	1,821,021	2 bp→CT	100%	coding (742‑743/1422 nt)	PP_1624 →	group II intron‑encoding maturase
RA	1,842,848	T→G	14.5%	N663T (AAC→ACC)	gacS ←	sensor protein GacS
RA	1,859,150	C→G	6.9%	intergenic (+28/+73)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,156	A→T	6.8%	intergenic (+34/+67)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,860,748	C→T	5.3%	M77I (ATG→ATA) ‡	purN ←	phosphoribosylglycinamide formyltransferase
RA	1,860,750	T→A	5.2%	M77L (ATG→TTG) ‡	purN ←	phosphoribosylglycinamide formyltransferase
RA	1,860,752	A→G	5.1%	L76P (CTA→CCA)	purN ←	phosphoribosylglycinamide formyltransferase
RA	1,892,568	C→G	6.4%	intergenic (+36/‑59)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,569	T→C	6.7%	intergenic (+37/‑58)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,570	G→A	6.4%	intergenic (+38/‑57)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,892,571	C→G	6.4%	intergenic (+39/‑56)	PP_1697 → / → PP_1698	transcriptional regulator, GntR family/MFS transporter
RA	1,897,245	G→T	10.8%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,249	T→A	10.4%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,253	A→C	10.0%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,899,259	C→T	6.9%	intergenic (+287/‑233)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,849	A→T	5.2%	K120* (AAG→TAG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,899,850	A→T	5.0%	K120M (AAG→ATG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,906,768	T→G	11.5%	intergenic (+66/+62)	nirD → / ← PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	1,906,788	T→G	8.2%	intergenic (+86/+42)	nirD → / ← PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	1,921,591	T→A	19.2%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	20.1%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,935,087	G→C	5.0%	L103L (CTG→CTC)	htrB →	lipid A biosynthesis lauroyl acyltransferase
RA	1,935,090	G→C	5.1%	A104A (GCG→GCC)	htrB →	lipid A biosynthesis lauroyl acyltransferase
RA	1,935,091	C→A	5.1%	R105S (CGC→AGC)	htrB →	lipid A biosynthesis lauroyl acyltransferase
RA	1,947,850	G→C	9.7%	intergenic (‑68/+102)	PP_1748 ← / ← PP_1749	hypothetical protein/acetyltransferase
RA	1,947,871	C→A	12.9%	intergenic (‑89/+81)	PP_1748 ← / ← PP_1749	hypothetical protein/acetyltransferase
RA	1,947,888	C→A	6.2%	intergenic (‑106/+64)	PP_1748 ← / ← PP_1749	hypothetical protein/acetyltransferase
RA	1,948,216	C→G	8.3%	R494R (CGG→CGC)	PP_1749 ←	acetyltransferase
RA	1,967,221	A→C	8.1%	intergenic (+48/+71)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,222	T→A	8.4%	intergenic (+49/+70)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,223	C→G	7.8%	intergenic (+50/+69)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,224	A→G	7.8%	intergenic (+51/+68)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,225	C→G	7.6%	intergenic (+52/+67)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,231	C→T	6.7%	intergenic (+58/+61)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,235	C→T	6.0%	intergenic (+62/+57)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,236	A→G	6.1%	intergenic (+63/+56)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,240	A→G	7.6%	intergenic (+67/+52)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,246	C→G	6.4%	intergenic (+73/+46)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,247	C→T	6.4%	intergenic (+74/+45)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,248	C→G	6.4%	intergenic (+75/+44)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,249	T→A	8.1%	intergenic (+76/+43)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,250	G→T	6.4%	intergenic (+77/+42)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,970,782	T→G	5.4%	intergenic (+33/‑233)	mtnA → / → PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
RA	1,976,255	A→T	5.2%	intergenic (+40/‑125)	pheA → / → PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,976,271	T→A	13.1%	intergenic (+56/‑109)	pheA → / → PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
JC	1,976,274	14 bp→14 bp	14.0%	intergenic (+59/‑93)	pheA → / → PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,976,290	T→A	12.3%	intergenic (+75/‑90)	pheA → / → PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,976,306	A→T	5.0%	intergenic (+91/‑74)	pheA → / → PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	2,034,835	C→T	5.5%	intergenic (+608/+39)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,034,836	G→T	5.6%	intergenic (+609/+38)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,034,837	A→C	5.5%	intergenic (+610/+37)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,034,838	A→G	5.7%	intergenic (+611/+36)	pgi‑I → / ← SBRG_xylD	glucose 6‑phosphate isomerase/xylose dehydratase
RA	2,041,668	A→C	5.7%	P33P (CCT→CCG) ‡	PP_1812 ←	hypothetical protein
RA	2,041,669	G→T	5.7%	P33H (CCT→CAT) ‡	PP_1812 ←	hypothetical protein
RA	2,052,548	A→G	5.4%	intergenic (‑76/+99)	PP_1824 ← / ← PP_1825	Smr domain‑containing protein/hypothetical protein
RA	2,052,565	A→G	5.6%	intergenic (‑93/+82)	PP_1824 ← / ← PP_1825	Smr domain‑containing protein/hypothetical protein
RA	2,059,853	A→C	9.2%	intergenic (+104/+24)	PP_1832 → / ← PP_1833	oxidase/hypothetical protein
RA	2,065,150	C→G	11.9%	intergenic (+42/‑165)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,157	C→A	14.4%	intergenic (+49/‑158)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,158	A→C	21.1%	intergenic (+50/‑157)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,159	T→C	15.2%	intergenic (+51/‑156)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,166	G→A	20.0%	intergenic (+58/‑149)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,170	T→C	19.8%	intergenic (+62/‑145)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,173	G→A	19.2%	intergenic (+65/‑142)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,177	T→C	19.5%	intergenic (+69/‑138)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,184	G→A	13.0%	intergenic (+76/‑131)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,185	G→T	12.7%	intergenic (+77/‑130)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,186	T→G	14.3%	intergenic (+78/‑129)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,065,193	C→G	12.4%	intergenic (+85/‑122)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,070,116	A→T	9.4%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,070,117	A→T	9.5%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,080,228	A→C	13.9%	intergenic (+48/+67)	PP_1853 → / ← PP_1854	LysR family transcriptional regulator/hypothetical protein
RA	2,083,077	G→T	5.6%	intergenic (+30/+85)	efp → / ← ohr	elongation factor P/organic hydroperoxide resistance protein
RA	2,083,078	C→T	5.6%	intergenic (+31/+84)	efp → / ← ohr	elongation factor P/organic hydroperoxide resistance protein
RA	2,083,079	A→G	5.7%	intergenic (+32/+83)	efp → / ← ohr	elongation factor P/organic hydroperoxide resistance protein
RA	2,083,080	A→C	5.6%	intergenic (+33/+82)	efp → / ← ohr	elongation factor P/organic hydroperoxide resistance protein
RA	2,089,800	C→T	5.0%	intergenic (+648/+270)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,089,805	A→G	5.0%	intergenic (+653/+265)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,097,154	G→C	7.1%	intergenic (‑240/+77)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,097,157	G→C	5.3%	intergenic (‑243/+74)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,136,243	G→T	5.1%	intergenic (‑44/+25)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,173,757	T→A	5.1%	intergenic (+327/+76)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,761	A→G	5.8%	intergenic (+331/+72)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,765	G→T	6.0%	intergenic (+335/+68)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,769	A→G	5.6%	intergenic (+339/+64)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,770	C→T	5.7%	intergenic (+340/+63)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,774	A→C	6.7%	intergenic (+344/+59)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,778	C→T	6.1%	intergenic (+348/+55)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,173,782	T→A	5.8%	intergenic (+352/+51)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,229,387	T→A	5.2%	intergenic (‑21/‑426)	PP_1964 ← / → holB	dGMP/dTMP/dhydroxyCMP kinase/DNA polymerase III subunit delta'
RA	2,235,078	C→G	5.7%	intergenic (+73/+158)	PP_1971 → / ← PP_t63	hypothetical protein/tRNA‑Asn
RA	2,238,330	G→T	6.6%	L492L (CTG→CTT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,334	A→G	7.5%	T494A (ACC→GCC) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,336	C→T	6.4%	T494T (ACC→ACT) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,342	C→T	6.7%	D496D (GAC→GAT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,345	G→A	6.7%	V497V (GTG→GTA)	uvrB →	uvrABC excinuclease protein B
RA	2,238,346	C→T	6.8%	L498L (CTG→TTG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,354	C→T	6.7%	G500G (GGC→GGT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,375	C→T	6.0%	G507G (GGC→GGT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,378	G→C	6.0%	L508L (CTG→CTC)	uvrB →	uvrABC excinuclease protein B
RA	2,238,381	C→T	6.1%	D509D (GAC→GAT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,384	G→T	6.2%	M510I (ATG→ATT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,387	C→G	6.2%	P511P (CCC→CCG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,390	Δ1 bp	5.4%	coding (1536/2016 nt)	uvrB →	uvrABC excinuclease protein B
RA	2,238,391	G→A	5.4%	V513M (GTG→ATG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,394	T→C	5.4%	S514P (TCG→CCG) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,395	C→G	5.3%	S514W (TCG→TGG) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,396:1	+T	5.4%	coding (1542/2016 nt)	uvrB →	uvrABC excinuclease protein B
RA	2,238,397	C→T	5.3%	L515L (CTG→TTG) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,399	G→C	5.5%	L515L (CTG→CTC) ‡	uvrB →	uvrABC excinuclease protein B
RA	2,238,402	G→C	5.4%	V516V (GTG→GTC)	uvrB →	uvrABC excinuclease protein B
RA	2,238,408	C→T	6.1%	I518I (ATC→ATT)	uvrB →	uvrABC excinuclease protein B
RA	2,238,411	C→G	5.3%	L519L (CTC→CTG)	uvrB →	uvrABC excinuclease protein B
RA	2,238,417	G→C	5.3%	A521A (GCG→GCC)	uvrB →	uvrABC excinuclease protein B
RA	2,238,938	T→G	13.2%	intergenic (+68/+60)	uvrB → / ← PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
RA	2,238,939	G→C	8.4%	intergenic (+69/+59)	uvrB → / ← PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
RA	2,238,940	C→A	8.4%	intergenic (+70/+58)	uvrB → / ← PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
RA	2,243,265	A→G	7.8%	intergenic (+47/‑234)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,243,268	G→A	6.9%	intergenic (+50/‑231)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,243,269	G→T	14.4%	intergenic (+51/‑230)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,243,271	A→G	7.5%	intergenic (+53/‑228)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,243,278	A→C	8.1%	intergenic (+60/‑221)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,243,291	C→G	5.3%	intergenic (+73/‑208)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,248,206	C→T	6.1%	intergenic (+30/+61)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,248,207	A→G	5.5%	intergenic (+31/+60)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,249,776	G→A	6.8%	S596S (AGC→AGT) ‡	PP_1983 ←	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,249,777	C→G	6.4%	S596T (AGC→ACC) ‡	PP_1983 ←	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,249,778	T→C	6.3%	S596G (AGC→GGC) ‡	PP_1983 ←	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,253,195	T→C	7.1%	D187D (GAT→GAC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,199	G→A	6.6%	V189M (GTG→ATG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,200	T→C	6.4%	V189A (GTG→GCG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,204	G→T	6.3%	L190L (CTG→CTT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,207	C→A	6.3%	A191A (GCC→GCA)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,208	G→A	6.4%	V192M (GTG→ATG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,210	G→C	6.3%	V192V (GTG→GTC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,213	C→T	6.3%	I193I (ATC→ATT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,217	A→G	6.4%	K195E (AAG→GAG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,222	C→T	6.5%	I196I (ATC→ATT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,228	C→G	6.8%	T198T (ACC→ACG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,231	C→T	7.0%	A199A (GCC→GCT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,234	T→C	6.7%	G200G (GGT→GGC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,239	A→C	7.1%	N202T (AAC→ACC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,240	C→A	6.7%	N202K (AAC→AAA) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,243	T→C	6.9%	G203G (GGT→GGC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,244	C→T	6.9%	H204Y (CAC→TAC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,246	C→T	6.9%	H204H (CAC→CAT) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,248	C→T	6.8%	A205V (GCC→GTC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,249	C→G	6.8%	A205A (GCC→GCG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,252	G→C	7.0%	M206I (ATG→ATC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,257	T→A	6.8%	F208Y (TTC→TAC) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,258	C→T	6.7%	F208F (TTC→TTT) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,261	A→T	7.2%	A209A (GCA→GCT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,267	T→C	6.9%	S211S (AGT→AGC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,277	G→T	6.8%	E215* (GAA→TAA) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,278	A→C	6.9%	E215A (GAA→GCA) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,279	A→G	6.9%	E215E (GAA→GAG) ‡	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,280	T→C	6.8%	L216L (TTG→CTG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,303	C→G	6.7%	T223T (ACC→ACG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,304	A→G	6.6%	I224V (ATC→GTC)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,318	C→G	7.0%	S228S (TCC→TCG)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,253,321	C→T	5.4%	I229I (ATC→ATT)	leuC →	3‑isopropylmalate dehydratase large subunit
RA	2,254,778	T→A	5.6%	intergenic (+69/‑50)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,254,779	T→A	5.4%	intergenic (+70/‑49)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,273,632	A→G	5.3%	intergenic (+51/‑49)	PP_t32 → / → PP_t33	tRNA‑Asp/tRNA‑Asp
RA	2,275,027	C→G	9.9%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,031	A→T	9.7%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,035	C→G	9.3%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,275,045	C→T	6.1%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,283,970	T→A	5.2%	F276Y (TTC→TAC)	PP_2009 →	1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,284,735	T→G	34.7%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,739	G→C	28.9%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,740	G→C	28.9%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,744	C→A	28.9%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,777	C→A	7.6%	intergenic (‑204/+25)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,784	G→A	5.5%	intergenic (‑211/+18)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,297,739	T→G	8.2%	intergenic (+20/+113)	PP_5496 → / ← PP_2023	hypothetical protein/glutathione S‑transferase family protein
RA	2,297,794	T→G	10.1%	intergenic (+75/+58)	PP_5496 → / ← PP_2023	hypothetical protein/glutathione S‑transferase family protein
RA	2,297,801	T→G	9.6%	intergenic (+82/+51)	PP_5496 → / ← PP_2023	hypothetical protein/glutathione S‑transferase family protein
RA	2,322,764	T→G	5.3%	N148H (AAC→CAC)	PP_2041 ←	LysR family transcriptional regulator
RA	2,322,766	G→T	5.5%	P147H (CCC→CAC)	PP_2041 ←	LysR family transcriptional regulator
RA	2,322,769	A→C	5.3%	V146G (GTG→GGG)	PP_2041 ←	LysR family transcriptional regulator
RA	2,322,771	C→A	5.3%	V145V (GTG→GTT)	PP_2041 ←	LysR family transcriptional regulator
RA	2,338,463	A→T	5.0%	intergenic (‑42/+38)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,342,668	A→C	5.6%	intergenic (+37/‑78)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,672	G→A	5.4%	intergenic (+41/‑74)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,673	T→A	5.6%	intergenic (+42/‑73)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,674	T→C	5.4%	intergenic (+43/‑72)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,383,367	T→G	9.3%	intergenic (+31/+56)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,383,368	C→A	8.3%	intergenic (+32/+55)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,397,548	G→C	7.7%	intergenic (‑191/+52)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,397,550	A→T	7.7%	intergenic (‑193/+50)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,397,552	G→C	7.8%	intergenic (‑195/+48)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,410,625	C→G	5.7%	intergenic (‑96/+46)	PP_2111 ← / ← acnA‑I	aerotaxis receptor/aconitate hydratase
RA	2,410,626	C→G	5.5%	intergenic (‑97/+45)	PP_2111 ← / ← acnA‑I	aerotaxis receptor/aconitate hydratase
RA	2,410,627	C→G	5.5%	intergenic (‑98/+44)	PP_2111 ← / ← acnA‑I	aerotaxis receptor/aconitate hydratase
RA	2,410,628	C→G	5.5%	intergenic (‑99/+43)	PP_2111 ← / ← acnA‑I	aerotaxis receptor/aconitate hydratase
RA	2,414,841	G→C	7.3%	intergenic (+140/‑281)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,414,842	G→C	7.2%	intergenic (+141/‑280)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,414,869	G→C	6.4%	intergenic (+168/‑253)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,414,870	G→C	6.5%	intergenic (+169/‑252)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,414,889	A→C	5.4%	intergenic (+188/‑233)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,422,563	Δ1 bp	8.6%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,422,567:1	+T	8.4%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,423,533	G→A	5.0%	G127R (GGG→AGG)	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,446,380	A→C	8.9%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,446,384	G→T	8.8%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,446,385	A→C	9.0%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,446,389	G→T	9.2%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,458,808	A→T	5.1%	intergenic (+94/‑87)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,458,829	T→G	6.6%	intergenic (+115/‑66)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,476,106	C→T	11.2%	intergenic (‑46/+134)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,108	T→C	17.0%	intergenic (‑48/+132)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,113	T→C	15.0%	intergenic (‑53/+127)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,114	C→T	14.5%	intergenic (‑54/+126)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,119	A→G	14.6%	intergenic (‑59/+121)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,120	G→A	14.1%	intergenic (‑60/+120)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,125	G→A	13.5%	intergenic (‑65/+115)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,476,127	A→G	13.3%	intergenic (‑67/+113)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,480,814	T→G	5.1%	intergenic (+102/+343)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,480,815	T→C	5.1%	intergenic (+103/+342)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,482,742	G→A	6.3%	R190R (CGC→CGT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,750	G→C	6.0%	Q188E (CAG→GAG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,754	G→A	6.1%	T186T (ACC→ACT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,781	G→C	6.7%	P177P (CCC→CCG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,784	G→C	6.9%	L176L (CTC→CTG) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,786	G→A	6.8%	L176F (CTC→TTC) ‡	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,787	G→A	6.8%	V175V (GTC→GTT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,790	G→A	5.8%	N174N (AAC→AAT)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,482,796	G→C	5.8%	I172M (ATC→ATG)	PP_2175 ←	3‑oxoacyl‑ACP reductase
RA	2,510,754	A→T	9.8%	M109K (ATG→AAG)	PP_2203 ←	hypothetical protein
RA	2,530,993	G→C	10.0%	intergenic (+155/‑252)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,530,994	G→C	9.6%	intergenic (+156/‑251)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,542,774	T→A	6.0%	intergenic (+22/+27)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,542,775	G→C	5.5%	intergenic (+23/+26)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,542,776	T→A	5.7%	intergenic (+24/+25)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,548,788	T→C	5.6%	intergenic (+22/+18)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,548,791	G→A	5.1%	intergenic (+25/+15)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,635,422	T→G	5.0%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,635,423	C→A	5.1%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,637,405	C→A	7.3%	intergenic (+30/+87)	PP_2304 → / ← PP_2305	peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein
RA	2,637,406	T→C	6.7%	intergenic (+31/+86)	PP_2304 → / ← PP_2305	peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein
RA	2,637,407	C→G	6.8%	intergenic (+32/+85)	PP_2304 → / ← PP_2305	peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein
RA	2,637,408	G→A	6.8%	intergenic (+33/+84)	PP_2304 → / ← PP_2305	peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein
RA	2,637,409	T→G	6.9%	intergenic (+34/+83)	PP_2304 → / ← PP_2305	peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein
RA	2,653,241	G→C	5.2%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,665,984	T→G	8.0%	intergenic (+44/‑119)	prpC → / → acnA‑II	methylcitrate synthase/aconitate hydratase
RA	2,670,018	T→G	16.5%	intergenic (+71/‑96)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,019:1	+T	12.9%	intergenic (+72/‑95)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,027	G→C	11.8%	intergenic (+80/‑87)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,028	G→A	12.3%	intergenic (+81/‑86)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,031	T→C	12.5%	intergenic (+84/‑83)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,032	G→A	11.4%	intergenic (+85/‑82)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,035	T→C	11.8%	intergenic (+88/‑79)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,036	G→C	11.5%	intergenic (+89/‑78)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,044	Δ1 bp	12.9%	intergenic (+97/‑70)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,046	C→A	17.5%	intergenic (+99/‑68)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,670,063	A→T	7.0%	intergenic (+116/‑51)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,671,636	T→G	7.7%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,671,639	C→A	7.7%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,675,142	A→C	5.2%	D164A (GAT→GCT)	PP_2340 →	hypothetical protein
RA	2,675,147	A→C	7.1%	M166L (ATG→CTG)	PP_2340 →	hypothetical protein
RA	2,675,154	G→T	5.0%	S168I (AGC→ATC)	PP_2340 →	hypothetical protein
RA	2,676,788	G→A	5.8%	intergenic (+74/+232)	PP_2343 → / ← PP_2344	hypothetical protein/hypothetical protein
RA	2,676,789	T→C	5.7%	intergenic (+75/+231)	PP_2343 → / ← PP_2344	hypothetical protein/hypothetical protein
RA	2,695,775	T→C	6.2%	V34A (GTC→GCC)	PP_2362 →	usher protein
RA	2,747,142	A→C	5.3%	intergenic (+20/+15)	PP_2399 → / ← PP_2400	hypothetical protein/hypothetical protein
RA	2,758,802	A→T	6.0%	intergenic (+16/+17)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,766,337	T→G	5.9%	A210A (GCA→GCC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,766,338	G→A	6.1%	A210V (GCA→GTA) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,776,777	G→A	5.1%	P234S (CCA→TCA)	PP_5521 ←	hypothetical protein
RA	2,792,283	A→T	8.7%	intergenic (‑71/+18)	PP_2442 ← / ← sstT	DUF480 domain‑containing protein/serine/threonine transporter SstT
RA	2,792,284	A→T	8.8%	intergenic (‑72/+17)	PP_2442 ← / ← sstT	DUF480 domain‑containing protein/serine/threonine transporter SstT
RA	2,792,285	A→T	9.6%	intergenic (‑73/+16)	PP_2442 ← / ← sstT	DUF480 domain‑containing protein/serine/threonine transporter SstT
RA	2,795,717	G→T	8.8%	intergenic (+61/+66)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,720	A→C	8.5%	intergenic (+64/+63)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,721	C→A	7.4%	intergenic (+65/+62)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,722	T→G	10.2%	intergenic (+66/+61)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,723	G→T	7.8%	intergenic (+67/+60)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,726	A→C	8.2%	intergenic (+70/+57)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,801,136	A→G	5.4%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,804,956	A→C	5.9%	K459Q (AAG→CAG) ‡	rbsA‑I →	ribose ABC transporter ‑ ATP‑binding subunit
RA	2,804,957	A→T	5.5%	K459M (AAG→ATG) ‡	rbsA‑I →	ribose ABC transporter ‑ ATP‑binding subunit
RA	2,804,958	G→T	5.9%	K459N (AAG→AAT) ‡	rbsA‑I →	ribose ABC transporter ‑ ATP‑binding subunit
RA	2,810,509	A→C	9.1%	noncoding (416/434 nt)	PP_mr35 ←	cspA regulatory region
RA	2,810,510	C→T	7.0%	noncoding (415/434 nt)	PP_mr35 ←	cspA regulatory region
RA	2,810,511	A→T	7.0%	noncoding (414/434 nt)	PP_mr35 ←	cspA regulatory region
RA	2,810,512	A→G	6.9%	noncoding (413/434 nt)	PP_mr35 ←	cspA regulatory region
RA	2,810,513	G→T	7.1%	noncoding (412/434 nt)	PP_mr35 ←	cspA regulatory region
RA	2,826,483	A→C	5.1%	E44A (GAG→GCG)	PP_2478 →	isoquinoline 1‑oxidoreductase subunit beta
RA	2,865,794	T→G	11.7%	S297A (TCG→GCG)	gllR →	HTH‑type transcriptional regulator GalR
RA	2,867,403	T→G	7.1%	intergenic (‑56/+76)	gllP ← / ← glllA	porin‑like protein/gallate dioxygenase
RA	2,875,722	G→T	9.6%	intergenic (+63/+19)	cigR → / ← PP_2527	membrane protein/membrane protein
RA	2,875,723	C→G	9.4%	intergenic (+64/+18)	cigR → / ← PP_2527	membrane protein/membrane protein
RA	2,875,724	A→C	13.4%	intergenic (+65/+17)	cigR → / ← PP_2527	membrane protein/membrane protein
RA	2,875,733	A→T	6.5%	intergenic (+74/+8)	cigR → / ← PP_2527	membrane protein/membrane protein
RA	2,892,398	C→G	5.9%	E59D (GAG→GAC)	PP_2544 ←	hypothetical protein
RA	2,892,403	T→C	6.6%	R58G (AGG→GGG)	PP_2544 ←	hypothetical protein
RA	2,892,404	T→A	5.9%	P57P (CCA→CCT) ‡	PP_2544 ←	hypothetical protein
RA	2,892,405	G→A	6.0%	P57L (CCA→CTA) ‡	PP_2544 ←	hypothetical protein
RA	2,892,410	C→G	6.9%	G55G (GGG→GGC)	PP_2544 ←	hypothetical protein
RA	2,901,203	A→T	5.2%	intergenic (+50/+18)	PP_2552 → / ← PP_2553	DOPA decarboxylase/MFS transporter
RA	2,938,375	C→G	6.1%	T148T (ACC→ACG)	PP_2569 →	MHS family metabolite MFS transporter
RA	2,938,378	C→G	6.1%	Y149* (TAC→TAG)	PP_2569 →	MHS family metabolite MFS transporter
RA	2,943,292	T→G	5.0%	S187A (TCG→GCG)	PP_2574 →	LysR family transcriptional regulator
RA	2,953,299	G→C	14.6%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,953,306	A→C	17.8%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,953,307	G→T	17.4%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,953,314	G→C	16.1%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
JC	2,960,745	Δ61 bp	7.3%	intergenic (+46/+36)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	3,003,789	G→C	7.5%	G183A (GGC→GCC)	PP_2625 →	hypothetical protein
RA	3,003,792	T→C	7.5%	L184P (CTG→CCG)	PP_2625 →	hypothetical protein
RA	3,003,798	C→G	6.9%	A186G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,032,382	G→C	5.1%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,035,510	A→T	5.1%	D29V (GAC→GTC)	PP_2646 →	hypothetical protein
RA	3,050,569	G→T	9.4%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,050,570	A→C	12.7%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,055,178	C→G	7.5%	intergenic (+14/+32)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,055,183	G→A	10.5%	intergenic (+19/+27)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,055,185	T→C	10.0%	intergenic (+21/+25)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,055,188	T→C	14.7%	intergenic (+24/+22)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,056,696	G→T	8.0%	intergenic (‑206/+102)	PP_2666 ← / ← PP_2667	hypothetical protein/ABC transporter permease
RA	3,056,697	C→G	8.0%	intergenic (‑207/+101)	PP_2666 ← / ← PP_2667	hypothetical protein/ABC transporter permease
RA	3,056,698	A→C	9.7%	intergenic (‑208/+100)	PP_2666 ← / ← PP_2667	hypothetical protein/ABC transporter permease
RA	3,058,923:1	+A	6.5%	coding (390/990 nt)	PP_2669 ←	outer membrane protein
RA	3,058,928	Δ1 bp	6.2%	coding (385/990 nt)	PP_2669 ←	outer membrane protein
RA	3,078,057	A→G	6.2%	intergenic (‑40/+34)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,078,059	T→G	6.7%	intergenic (‑42/+32)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,078,060	C→A	7.6%	intergenic (‑43/+31)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,078,062	C→T	6.7%	intergenic (‑45/+29)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,121,729	G→C	5.1%	A307A (GCC→GCG)	PP_2736 ←	hypothetical protein
RA	3,121,738	G→C	5.0%	L304L (CTC→CTG)	PP_2736 ←	hypothetical protein
RA	3,139,872	C→A	5.1%	L16M (CTG→ATG)	PP_2754 →	OprD family outer membrane porin
RA	3,143,455	A→C	9.2%	N136T (AAC→ACC)	PP_2757 →	sugar‑binding protein
RA	3,191,243	G→C	8.3%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,191,244	G→C	8.0%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,238,113	G→T	5.1%	G415C (GGT→TGT) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,238,115	T→A	5.2%	G415G (GGT→GGA) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,238,117	A→C	5.8%	Q416P (CAG→CCG)	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,268,076	G→C	6.4%	intergenic (+28/+31)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,078	A→T	6.3%	intergenic (+30/+29)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,079	A→T	6.3%	intergenic (+31/+28)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,268,081	G→C	6.5%	intergenic (+33/+26)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,276,801	T→A	5.0%	H198Q (CAT→CAA)	eamA →	O‑acetylserine/cysteine export transporter
RA	3,294,286	G→C	8.2%	Q535H (CAG→CAC)	PP_2893 →	hypothetical protein
RA	3,294,288	T→G	11.9%	L536R (CTG→CGG)	PP_2893 →	hypothetical protein
RA	3,296,313	G→A	5.0%	G1211E (GGG→GAG)	PP_2893 →	hypothetical protein
RA	3,296,317	G→T	5.0%	L1212L (CTG→CTT)	PP_2893 →	hypothetical protein
RA	3,296,320	A→C	5.1%	A1213A (GCA→GCC)	PP_2893 →	hypothetical protein
RA	3,296,324	T→C	5.0%	S1215P (TCA→CCA)	PP_2893 →	hypothetical protein
RA	3,302,127	T→A	5.2%	intergenic (+60/+22)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,302,128	T→A	5.2%	intergenic (+61/+21)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,310,066	A→C	5.0%	D103A (GAT→GCT)	csiD →	carbon starvation induced protein
RA	3,310,068	G→C	5.2%	D104H (GAC→CAC)	csiD →	carbon starvation induced protein
RA	3,310,073	G→C	5.4%	V105V (GTG→GTC)	csiD →	carbon starvation induced protein
RA	3,310,075	G→T	5.4%	S106I (AGC→ATC)	csiD →	carbon starvation induced protein
RA	3,314,652	G→T	6.2%	intergenic (+28/‑134)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,314,653	T→A	6.2%	intergenic (+29/‑133)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,314,654	T→A	6.1%	intergenic (+30/‑132)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,314,655	A→C	6.0%	intergenic (+31/‑131)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,315,793	T→G	5.2%	intergenic (+33/‑126)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,321,139	T→G	11.3%	intergenic (‑138/+54)	treSA ← / ← PP_2919	trehalose synthase A/LysR family transcriptional regulator
RA	3,336,918:1	+T	5.9%	coding (609/1704 nt)	PP_2932 ←	amidase family protein
RA	3,336,923	Δ1 bp	5.6%	coding (604/1704 nt)	PP_2932 ←	amidase family protein
RA	3,341,094	T→A	5.9%	intergenic (‑131/+112)	PP_2935 ← / ← ybiT	membrane protein/ABC‑F family ATPase
RA	3,341,095	T→A	5.6%	intergenic (‑132/+111)	PP_2935 ← / ← ybiT	membrane protein/ABC‑F family ATPase
RA	3,356,982	A→G	5.5%	T65T (ACT→ACC)	PP_2950 ←	hypothetical protein
RA	3,356,985	T→C	5.6%	L64L (CTA→CTG)	PP_2950 ←	hypothetical protein
RA	3,356,992	T→G	5.9%	D62A (GAC→GCC)	PP_2950 ←	hypothetical protein
RA	3,356,994	C→T	6.3%	R61R (CGG→CGA) ‡	PP_2950 ←	hypothetical protein
RA	3,356,995	C→T	5.9%	R61Q (CGG→CAG) ‡	PP_2950 ←	hypothetical protein
RA	3,356,996	G→C	5.6%	R61G (CGG→GGG) ‡	PP_2950 ←	hypothetical protein
RA	3,356,997	A→G	5.7%	A60A (GCT→GCC)	PP_2950 ←	hypothetical protein
RA	3,357,003	T→G	5.8%	E58D (GAA→GAC) ‡	PP_2950 ←	hypothetical protein
RA	3,357,004	T→G	6.0%	E58A (GAA→GCA) ‡	PP_2950 ←	hypothetical protein
RA	3,357,013	T→G	6.2%	N55T (AAC→ACC)	PP_2950 ←	hypothetical protein
RA	3,357,015	T→A	6.1%	A54A (GCA→GCT) ‡	PP_2950 ←	hypothetical protein
RA	3,357,016	G→A	5.9%	A54V (GCA→GTA) ‡	PP_2950 ←	hypothetical protein
RA	3,357,018	A→G	5.9%	F53F (TTT→TTC)	PP_2950 ←	hypothetical protein
RA	3,357,021	C→T	5.7%	E52E (GAG→GAA)	PP_2950 ←	hypothetical protein
RA	3,357,024	G→A	5.7%	A51A (GCC→GCT) ‡	PP_2950 ←	hypothetical protein
RA	3,357,025	G→A	5.7%	A51V (GCC→GTC) ‡	PP_2950 ←	hypothetical protein
RA	3,357,027	A→G	5.8%	R50R (CGT→CGC)	PP_2950 ←	hypothetical protein
RA	3,357,033	A→G	6.1%	R48R (CGT→CGC)	PP_2950 ←	hypothetical protein
RA	3,357,039	T→C	5.8%	Q46Q (CAA→CAG) ‡	PP_2950 ←	hypothetical protein
RA	3,357,040	T→C	5.8%	Q46R (CAA→CGA) ‡	PP_2950 ←	hypothetical protein
RA	3,357,042	G→C	6.0%	T45T (ACC→ACG)	PP_2950 ←	hypothetical protein
RA	3,357,050	C→A	5.5%	V43L (GTG→TTG)	PP_2950 ←	hypothetical protein
RA	3,357,051	C→G	5.5%	T42T (ACG→ACC)	PP_2950 ←	hypothetical protein
RA	3,357,060	C→G	5.6%	L39L (CTG→CTC)	PP_2950 ←	hypothetical protein
RA	3,357,063	G→A	5.7%	A38A (GCC→GCT)	PP_2950 ←	hypothetical protein
RA	3,357,066	A→G	5.6%	I37I (ATT→ATC) ‡	PP_2950 ←	hypothetical protein
RA	3,357,068	T→C	5.4%	I37V (ATT→GTT) ‡	PP_2950 ←	hypothetical protein
RA	3,357,072	T→C	5.5%	E35E (GAA→GAG) ‡	PP_2950 ←	hypothetical protein
RA	3,357,073	T→G	5.5%	E35A (GAA→GCA) ‡	PP_2950 ←	hypothetical protein
RA	3,357,078	T→A	5.5%	E33D (GAA→GAT)	PP_2950 ←	hypothetical protein
RA	3,357,099	C→T	5.5%	E26E (GAG→GAA)	PP_2950 ←	hypothetical protein
RA	3,374,085	T→C	5.7%	intergenic (‑48/‑71)	csoR ← / → PP_2970	copper utilization transcriptional regulator/hypothetical protein
RA	3,374,086	G→C	5.9%	intergenic (‑49/‑70)	csoR ← / → PP_2970	copper utilization transcriptional regulator/hypothetical protein
RA	3,374,087	G→A	5.7%	intergenic (‑50/‑69)	csoR ← / → PP_2970	copper utilization transcriptional regulator/hypothetical protein
RA	3,374,783	C→G	10.2%	intergenic (+268/+24)	PP_2970 → / ← PP_2971	hypothetical protein/transposase
RA	3,382,501	A→G	5.3%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,382,505	T→A	5.5%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,382,509	C→T	5.9%	V72V (GTC→GTT)	tnpT‑I →	cointegrate resolution protein T
RA	3,400,868	C→G	6.4%	intergenic (+123/‑119)	aroQ‑III → / → PP_3004	type II 3‑dehydroquinate dehydratase/hypothetical protein
RA	3,424,775	C→T	7.0%	A323V (GCT→GTT) ‡	PP_3038 →	TraC domain‑containing protein
RA	3,424,776	T→A	6.9%	A323A (GCT→GCA) ‡	PP_3038 →	TraC domain‑containing protein
RA	3,424,777	A→G	6.9%	T324A (ACC→GCC)	PP_3038 →	TraC domain‑containing protein
RA	3,426,855	C→G	5.1%	intergenic (+478/‑34)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,426,857	T→C	5.2%	intergenic (+480/‑32)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,426,858	G→A	5.1%	intergenic (+481/‑31)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,426,860	C→G	5.2%	intergenic (+483/‑29)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,449,251	A→C	14.5%	S18R (AGC→CGC)	PP_5556 →	bacteriophage lysis protein
RA	3,449,256	T→G	15.4%	A19A (GCT→GCG)	PP_5556 →	bacteriophage lysis protein
RA	3,455,428	C→T	5.9%	intergenic (‑17/+96)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,455,445	A→G	6.8%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,468,020	G→C	9.0%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,021	A→T	9.0%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,022	A→T	9.1%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,023	G→C	9.1%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,468,806	T→G	21.1%	intergenic (‑16/+108)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,477,458	A→C	5.8%	L407W (TTG→TGG) ‡	PP_3087 ←	excinuclease ABC subunit A
RA	3,477,459	A→C	12.2%	L407V (TTG→GTG) ‡	PP_3087 ←	excinuclease ABC subunit A
RA	3,477,460	G→C	5.2%	G406G (GGC→GGG)	PP_3087 ←	excinuclease ABC subunit A
RA	3,500,229	C→G	5.5%	intergenic (‑668/+38)	PP_5562 ← / ← PP_5563	hypothetical protein/membrane protein
RA	3,530,531	T→A	6.1%	L128Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,530,534	T→A	6.3%	L129Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,536,727	T→G	6.6%	intergenic (+49/‑106)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,536,732	A→C	6.2%	intergenic (+54/‑101)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,536,733	C→A	6.1%	intergenic (+55/‑100)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,536,736	T→G	6.0%	intergenic (+58/‑97)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,536,737	G→T	6.1%	intergenic (+59/‑96)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,536,742	C→A	6.4%	intergenic (+64/‑91)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,580,393	T→A	6.8%	intergenic (+105/‑219)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,581,959	G→C	14.1%	Q43H (CAG→CAC)	benR →	BenABC operon transcriptional activator
RA	3,595,232	T→A	5.4%	R101R (CGT→CGA)	PP_3171 →	hypothetical protein
RA	3,595,233	A→T	5.2%	I102F (ATC→TTC) ‡	PP_3171 →	hypothetical protein
RA	3,595,234	T→A	5.1%	I102N (ATC→AAC) ‡	PP_3171 →	hypothetical protein
RA	3,599,045	G→T	5.1%	intergenic (‑75/+21)	nemA ← / ← PP_3174	FMN‑linked N‑ethylmaleimide reductase/oxidoreductase
RA	3,599,048	T→G	5.0%	intergenic (‑78/+18)	nemA ← / ← PP_3174	FMN‑linked N‑ethylmaleimide reductase/oxidoreductase
RA	3,599,050	A→C	5.0%	intergenic (‑80/+16)	nemA ← / ← PP_3174	FMN‑linked N‑ethylmaleimide reductase/oxidoreductase
RA	3,626,109	G→C	6.7%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,626,772	T→G	6.8%	E227D (GAA→GAC)	PP_3195 ←	hypothetical protein
RA	3,629,798	G→C	5.2%	G34A (GGC→GCC)	PP_3198 →	2Fe‑2S ferredoxin
RA	3,630,542	C→G	5.2%	Q123E (CAG→GAG)	PP_3199 →	monooxygenase
RA	3,630,549	G→C	5.5%	R125P (CGC→CCC)	PP_3199 →	monooxygenase
RA	3,630,551	C→A	5.1%	L126M (CTG→ATG) ‡	PP_3199 →	monooxygenase
RA	3,630,552	T→G	5.3%	L126R (CTG→CGG) ‡	PP_3199 →	monooxygenase
RA	3,630,554	G→C	5.5%	G127R (GGC→CGC)	PP_3199 →	monooxygenase
RA	3,646,913	C→T	6.6%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,646,916	A→G	6.7%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,647,870	A→T	5.0%	L31Q (CTG→CAG)	PP_3212 ←	Rieske 2Fe‑2S family protein
RA	3,719,810	T→G	5.7%	N250H (AAC→CAC)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,719,811	C→A	5.5%	V249V (GTG→GTT)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,724,769	T→A	5.0%	Y21N (TAT→AAT) ‡	PP_3288 →	universal stress protein family protein
RA	3,724,770	A→T	5.0%	Y21F (TAT→TTT) ‡	PP_3288 →	universal stress protein family protein
RA	3,724,771	T→A	5.1%	Y21* (TAT→TAA) ‡	PP_3288 →	universal stress protein family protein
RA	3,755,560	G→T	6.9%	A96A (GCC→GCA)	PP_3316 ←	chaperone‑associated ATPase
RA	3,755,563	A→C	6.7%	V95V (GTT→GTG)	PP_3316 ←	chaperone‑associated ATPase
RA	3,764,907	A→T	7.3%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,764,912	A→T	6.2%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,765,467	A→G	7.9%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,765,469	G→C	7.7%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,765,471	C→T	7.7%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,770,225	T→G	5.1%	L92R (CTG→CGG)	PP_5600 →	hypothetical protein
RA	3,770,240	C→A	5.3%	P97Q (CCG→CAG)	PP_5600 →	hypothetical protein
RA	3,778,338	T→G	17.4%	intergenic (+55/‑88)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,778,340	C→G	11.3%	intergenic (+57/‑86)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,778,344	T→G	15.6%	intergenic (+61/‑82)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,778,347	G→C	11.0%	intergenic (+64/‑79)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,778,358	G→C	8.8%	intergenic (+75/‑68)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,778,360	A→C	10.6%	intergenic (+77/‑66)	PP_3338 → / → PP_3339	cytochrome bd‑type quinol oxidase/hypothetical protein
RA	3,786,536	T→A	22.3%	intergenic (+73/‑235)	nikE → / → PP_3348	nickel ABC transporter ATP‑binding protein/GGDEF domain‑containing protein
RA	3,803,245	G→A	5.1%	N879N (AAC→AAT)	PP_3361 ←	aminotransferase
RA	3,803,251	Δ1 bp	5.0%	coding (2631/3048 nt)	PP_3361 ←	aminotransferase
RA	3,803,263	A→C	5.2%	V873V (GTT→GTG)	PP_3361 ←	aminotransferase
RA	3,803,266	C→T	5.2%	E872E (GAG→GAA)	PP_3361 ←	aminotransferase
RA	3,803,269	G→C	5.3%	R871R (CGC→CGG)	PP_3361 ←	aminotransferase
RA	3,803,275	G→T	5.3%	T869T (ACC→ACA)	PP_3361 ←	aminotransferase
RA	3,803,278	C→G	5.2%	V868V (GTG→GTC)	PP_3361 ←	aminotransferase
RA	3,803,281	T→A	5.2%	V867V (GTA→GTT)	PP_3361 ←	aminotransferase
RA	3,803,287	C→A	5.3%	S865S (TCG→TCT)	PP_3361 ←	aminotransferase
RA	3,803,293	C→T	5.2%	P863P (CCG→CCA)	PP_3361 ←	aminotransferase
RA	3,803,296	G→A	5.4%	H862H (CAC→CAT)	PP_3361 ←	aminotransferase
RA	3,803,299	G→A	5.3%	G861G (GGC→GGT)	PP_3361 ←	aminotransferase
RA	3,823,892:1	+G	33.2%	coding (1257/1293 nt)	kguT ←	2‑ketogluconate transporter, putative
RA	3,824,695	G→C	53.2%	L152V (CTG→GTG)	kguT ←	2‑ketogluconate transporter, putative
RA	3,824,800	C→A	48.4%	A117S (GCT→TCT)	kguT ←	2‑ketogluconate transporter, putative
RA	3,825,009	G→T	49.7%	T47N (ACC→AAC)	kguT ←	2‑ketogluconate transporter, putative
RA	3,827,923	G→T	100%	R30S (CGT→AGT)	ptxS ←	2‑ketogluconate utilization repressor
RA	3,847,686	G→C	6.3%	intergenic (‑88/+11)	PP_3394 ← / ← PP_3395	3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator
RA	3,855,084	T→A	5.3%	I169N (ATT→AAT)	alkB →	alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase
RA	3,855,731	C→T	5.1%	intergenic (+48/+34)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,855,738	G→A	5.2%	intergenic (+55/+27)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,871,824	T→G	9.4%	E354A (GAG→GCG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,871,825	C→A	5.1%	E354* (GAG→TAG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,884,790	C→T	5.8%	intergenic (+67/‑158)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,885,564	C→G	5.1%	P206R (CCC→CGC)	PP_3428 →	TPR repeat‑containing protein
RA	3,931,763	G→T	7.9%	intergenic (+20/+18)	PP_3464 → / ← PP_5603	hypothetical protein/FAD dependent oxidoreductase
RA	3,931,764	A→T	6.0%	intergenic (+21/+17)	PP_3464 → / ← PP_5603	hypothetical protein/FAD dependent oxidoreductase
RA	3,931,765	A→C	11.1%	intergenic (+22/+16)	PP_3464 → / ← PP_5603	hypothetical protein/FAD dependent oxidoreductase
RA	3,949,904	A→C	10.5%	P37P (CCT→CCG)	PP_3483 ←	type II secretion system protein
RA	3,949,913	A→C	7.5%	C34W (TGT→TGG)	PP_3483 ←	type II secretion system protein
RA	3,949,938	T→G	9.9%	Q26P (CAG→CCG)	PP_3483 ←	type II secretion system protein
RA	3,953,071	A→C	7.8%	intergenic (‑69/+126)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,953,116	T→G	8.1%	intergenic (‑114/+81)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,962,579	T→C	5.7%	intergenic (‑229/‑100)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,962,581	T→A	5.5%	intergenic (‑231/‑98)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,962,583	G→A	5.4%	intergenic (‑233/‑96)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,975,693	T→C	5.7%	N249S (AAC→AGC) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,694	T→G	5.6%	N249H (AAC→CAC) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,695	G→C	5.6%	A248A (GCC→GCG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,697	C→T	5.7%	A248T (GCC→ACC) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,702	A→G	5.6%	L246S (TTG→TCG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,703	A→C	5.8%	L246V (TTG→GTG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,704	T→C	5.6%	E245E (GAA→GAG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,709	A→T	5.8%	L244M (TTG→ATG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,710	C→T	5.7%	P243P (CCG→CCA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,715	G→T	5.6%	L242M (CTG→ATG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,716	G→A	5.7%	D241D (GAC→GAT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,739	A→G	5.7%	L234L (TTG→CTG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,740	T→C	5.7%	T233T (ACA→ACG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,751	C→T	5.6%	D230N (GAT→AAT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,755	C→T	5.6%	A228A (GCG→GCA) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,756	G→T	5.6%	A228E (GCG→GAG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,757	C→G	5.5%	A228P (GCG→CCG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,761	G→A	5.6%	I226I (ATC→ATT) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,763	T→A	5.6%	I226F (ATC→TTC) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,767	C→T	5.7%	G224G (GGG→GGA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,771	G→C	5.9%	T223S (ACC→AGC)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,773	C→T	5.7%	K222K (AAG→AAA) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,774	T→G	5.9%	K222T (AAG→ACG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,775	T→A	5.7%	K222* (AAG→TAG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,776	G→A	5.8%	R221R (CGC→CGT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,779	C→G	5.8%	Q220H (CAG→CAC) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,781	G→T	5.5%	Q220K (CAG→AAG) ‡	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,782	G→C	5.7%	H219Q (CAC→CAG)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,785	A→T	6.0%	A218A (GCT→GCA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,788	A→G	6.6%	G217G (GGT→GGC)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,791	G→A	6.3%	T216T (ACC→ACT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,800	G→A	6.3%	G213G (GGC→GGT)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	3,975,806	C→T	6.5%	E211E (GAG→GAA)	PP_3503 ←	sigma‑54 dependent transcriptional regulator
RA	4,051,873	A→G	19.3%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,051,876	C→G	17.5%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,051,879	C→T	17.6%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,051,976	C→A	5.1%	L15M (CTG→ATG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,051,977	T→G	6.4%	L15R (CTG→CGG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,081,393	T→G	12.4%	intergenic (‑231/+153)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,398	T→G	6.3%	intergenic (‑236/+148)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,403	A→G	5.2%	intergenic (‑241/+143)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,414	A→T	5.4%	intergenic (‑252/+132)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,415	A→T	5.4%	intergenic (‑253/+131)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,424	A→C	9.1%	intergenic (‑262/+122)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,425	G→C	7.4%	intergenic (‑263/+121)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,429	T→A	11.5%	intergenic (‑267/+117)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,449	T→A	8.7%	intergenic (‑287/+97)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,081,483	A→C	10.5%	intergenic (‑321/+63)	sdaC ← / ← amaC	serine:H+ symport permease/D‑lysine aminotransferase
RA	4,135,943	T→A	5.1%	A351A (GCA→GCT) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,135,945	C→G	5.4%	A351P (GCA→CCA) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,135,947	T→A	5.4%	Q350L (CAG→CTG)	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,145,848	T→A	6.3%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,145,849	T→A	6.7%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,152,000	A→T	6.9%	intergenic (+33/‑364)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,152,038	A→C	5.3%	intergenic (+71/‑326)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,160,432	T→G	22.9%	L159R (CTG→CGG)	PP_3661 →	membrane protein
RA	4,160,437	A→C	20.6%	S161R (AGC→CGC)	PP_3661 →	membrane protein
RA	4,161,048	A→G	6.8%	intergenic (+30/‑179)	PP_3661 → / → PP_3662	membrane protein/hypothetical protein
RA	4,164,065	T→C	7.8%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,069	T→A	7.4%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,070	T→A	7.4%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,074	G→A	7.5%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,172,146	T→G	11.0%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,172,148	A→T	9.6%	intergenic (‑290/‑97)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,172,149	A→T	9.7%	intergenic (‑291/‑96)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,172,151	C→A	9.9%	intergenic (‑293/‑94)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,190,315	G→T	6.2%	R82L (CGT→CTT) ‡	PP_3684 →	hypothetical protein
RA	4,190,316	T→C	6.5%	R82R (CGT→CGC) ‡	PP_3684 →	hypothetical protein
RA	4,190,317	G→A	6.4%	E83K (GAG→AAG) ‡	PP_3684 →	hypothetical protein
RA	4,190,318	A→C	6.3%	E83A (GAG→GCG) ‡	PP_3684 →	hypothetical protein
RA	4,246,949	T→G	5.5%	D13A (GAC→GCC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,246,952	C→A	5.4%	G12V (GGC→GTC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,250,320	C→T	5.3%	R558H (CGC→CAC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,254,160	C→A	6.3%	intergenic (‑162/+78)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,254,163	A→G	6.8%	intergenic (‑165/+75)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,254,168	G→C	6.6%	intergenic (‑170/+70)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,254,171	G→C	6.1%	intergenic (‑173/+67)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,254,176	C→T	6.6%	intergenic (‑178/+62)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,254,179	T→G	5.1%	intergenic (‑181/+59)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,258,306	G→C	5.2%	H189Q (CAC→CAG)	PP_3729 ←	amino acid‑binding protein‑like protein
RA	4,258,312	G→A	5.2%	I187I (ATC→ATT) ‡	PP_3729 ←	amino acid‑binding protein‑like protein
RA	4,258,314	T→C	5.1%	I187V (ATC→GTC) ‡	PP_3729 ←	amino acid‑binding protein‑like protein
RA	4,258,320	G→C	5.3%	L185V (CTG→GTG)	PP_3729 ←	amino acid‑binding protein‑like protein
RA	4,258,322	A→T	5.3%	L184Q (CTG→CAG)	PP_3729 ←	amino acid‑binding protein‑like protein
RA	4,266,878	T→A	5.2%	L42Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,266,890	T→A	5.3%	L46Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,270,850	T→A	5.0%	E139D (GAA→GAT) ‡	PP_3740 ←	MFS transporter
RA	4,270,851	T→A	5.5%	E139V (GAA→GTA) ‡	PP_3740 ←	MFS transporter
RA	4,298,832	A→G	5.3%	intergenic (+33/‑65)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,298,833	C→T	5.3%	intergenic (+34/‑64)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,316,697	Δ1 bp	5.5%	coding (933/1209 nt)	aspC →	aminotransferase
RA	4,316,701:1	+T	5.3%	coding (937/1209 nt)	aspC →	aminotransferase
RA	4,340,369	T→C	5.9%	intergenic (+23/+119)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,340,370	G→A	5.9%	intergenic (+24/+118)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,340,459	A→T	10.4%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,340,460	A→T	7.5%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,342,041	A→T	43.7%	intergenic (+60/‑271)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,042	G→C	41.5%	intergenic (+61/‑270)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,047	A→G	43.0%	intergenic (+66/‑265)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,048	C→T	42.5%	intergenic (+67/‑264)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,049	A→G	43.7%	intergenic (+68/‑263)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,050	C→T	43.7%	intergenic (+69/‑262)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,055	G→C	44.1%	intergenic (+74/‑257)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,342,056	A→T	40.3%	intergenic (+75/‑256)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,346,268	A→T	14.1%	intergenic (+33/‑123)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,270	C→T	13.5%	intergenic (+35/‑121)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,271	A→G	13.9%	intergenic (+36/‑120)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,276	C→G	11.8%	intergenic (+41/‑115)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,279	C→G	12.4%	intergenic (+44/‑112)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,284	C→T	13.3%	intergenic (+49/‑107)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,285	A→G	13.5%	intergenic (+50/‑106)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,346,287	A→T	13.6%	intergenic (+52/‑104)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,350,671	A→G	55.4%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,358,167	T→G	7.3%	V240G (GTG→GGG)	modC →	molybdate ABC transporter ATP‑binding protein ModC
RA	4,391,474	T→A	5.2%	T411T (ACA→ACT)	PP_3865 ←	tail protein
RA	4,448,457	G→C	5.6%	Y358* (TAC→TAG)	nicC ←	6‑hydroxynicotinate 3‑monooxygenase
RA	4,448,460	G→C	5.8%	L357L (CTC→CTG)	nicC ←	6‑hydroxynicotinate 3‑monooxygenase
RA	4,503,263	A→T	5.4%	intergenic (‑236/+19)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,503,266	A→T	5.5%	intergenic (‑239/+16)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,505,755	C→T	6.0%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,505,756	A→G	6.1%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,514,428	C→A	7.5%	G9V (GGT→GTT)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,514,431	T→G	7.9%	N8T (AAC→ACC)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,530,319	T→A	5.8%	intergenic (+28/‑48)	purB → / → PP_4017	adenylosuccinate lyase/hypothetical protein
RA	4,531,991	T→A	11.6%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,531,992	T→A	12.7%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,535,582	A→T	8.7%	intergenic (+58/‑116)	PP_4020 → / → cpo	oxidoreductase/non‑heme chloroperoxidase
RA	4,552,829	T→C	5.1%	L78L (TTG→CTG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,843	C→G	5.6%	R82R (CGC→CGG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,844	T→C	5.6%	S83P (TCT→CCT) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,846	T→G	5.6%	S83S (TCT→TCG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,849	G→C	5.2%	L84L (CTG→CTC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,853	A→G	5.2%	I86V (ATC→GTC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,855	C→G	5.2%	I86M (ATC→ATG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,864	T→C	7.0%	R89R (CGT→CGC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,870	C→G	6.9%	I91M (ATC→ATG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,872	C→A	7.2%	T92N (ACC→AAC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,873	C→A	7.0%	T92T (ACC→ACA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,874	C→G	6.7%	Q93E (CAG→GAG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,876	G→A	7.0%	Q93Q (CAG→CAA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,884	A→T	7.1%	K96M (AAG→ATG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,886	G→C	7.4%	D97H (GAC→CAC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,887	A→G	7.3%	D97G (GAC→GGC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,911	T→C	8.5%	V105A (GTG→GCG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,912	G→T	8.4%	V105V (GTG→GTT) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,916	C→A	8.4%	L107M (CTG→ATG) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,918	G→C	8.4%	L107L (CTG→CTC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,927	G→A	7.9%	P110P (CCG→CCA)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,931	A→G	7.9%	I112V (ATA→GTA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,932	T→A	7.8%	I112K (ATA→AAA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,936	G→A	8.0%	E113E (GAG→GAA)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,940	T→G	7.9%	S115A (TCG→GCG)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,948	G→A	7.8%	K117K (AAG→AAA)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,949	T→G	7.8%	F118V (TTC→GTC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,950	T→C	7.7%	F118S (TTC→TCC) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,951	C→A	7.7%	F118L (TTC→TTA) ‡	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,552,960	G→C	7.6%	P121P (CCG→CCC)	pydA →	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
RA	4,553,990	C→A	10.4%	intergenic (+118/+63)	pydA → / ← rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
RA	4,585,549	A→C	12.5%	intergenic (‑156/+15)	treSB ← / ← glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
RA	4,588,023	A→G	7.3%	intergenic (+140/+77)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,025	C→A	6.9%	intergenic (+142/+75)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,027	T→C	7.7%	intergenic (+144/+73)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,032	Δ1 bp	7.7%	intergenic (+149/+68)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,034	C→A	7.8%	intergenic (+151/+66)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,037	G→C	7.4%	intergenic (+154/+63)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,040	T→G	7.2%	intergenic (+157/+60)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,042:1	+C	7.6%	intergenic (+159/+58)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,046	G→A	8.2%	intergenic (+163/+54)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,048	T→G	10.8%	intergenic (+165/+52)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,588,050	C→T	11.2%	intergenic (+167/+50)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,589,663	G→T	7.1%	R40R (CGC→CGA) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,589,665	G→C	7.1%	R40G (CGC→GGC) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,589,666	G→C	7.2%	S39S (TCC→TCG) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,589,668	A→C	7.3%	S39A (TCC→GCC) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,591,613	C→T	7.4%	D109D (GAC→GAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,616	C→A	7.7%	A110A (GCC→GCA)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,622	A→G	10.9%	V112V (GTA→GTG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,625	A→G	11.2%	K113K (AAA→AAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,631	T→C	11.3%	G115G (GGT→GGC)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,632	T→A	11.3%	S116T (TCG→ACG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,634	G→C	11.3%	S116S (TCG→TCC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,637	C→T	12.0%	Y117Y (TAC→TAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,640	C→T	12.2%	Y118Y (TAC→TAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,644	C→G	11.4%	L120V (CTG→GTG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,646	G→C	11.5%	L120L (CTG→CTC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,670	A→G	15.0%	A128A (GCA→GCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,673	A→G	14.8%	Q129Q (CAA→CAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,674	A→G	14.8%	T130A (ACC→GCC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,675	C→A	14.5%	T130N (ACC→AAC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,676	C→A	14.5%	T130T (ACC→ACA) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,682	C→G	14.0%	A132A (GCC→GCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,683	C→G	14.0%	L133V (CTG→GTG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,684	T→G	14.0%	L133R (CTG→CGG) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,685	G→C	13.8%	L133L (CTG→CTC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,686	C→G	13.8%	Q134E (CAG→GAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,694	C→T	13.4%	R136R (CGC→CGT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,700	G→C	13.3%	P138P (CCG→CCC)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,706	C→T	12.8%	I140I (ATC→ATT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,715	G→C	12.0%	V143V (GTG→GTC)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,718	C→T	11.5%	D144D (GAC→GAT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,730	C→G	11.0%	A148A (GCC→GCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,734	T→C	11.1%	L150L (TTG→CTG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,740	C→A	8.8%	R152S (CGC→AGC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,741	G→A	8.5%	R152H (CGC→CAC) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,742	C→T	8.5%	R152R (CGC→CGT) ‡	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,751	A→G	7.7%	E155E (GAA→GAG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,754	G→T	5.6%	V156V (GTG→GTT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,757	C→T	5.7%	F157F (TTC→TTT)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,591,760	C→G	5.6%	P158P (CCC→CCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,609,380	A→T	5.2%	K29* (AAG→TAG) ‡	PP_4079 →	hypothetical protein
RA	4,609,381	A→T	5.0%	K29M (AAG→ATG) ‡	PP_4079 →	hypothetical protein
RA	4,637,324	C→A	37.9%	A134S (GCG→TCG)	uvrY ←	BarA/UvrY two‑componenent system response regulator
RA	4,671,699	G→C	5.3%	T21T (ACG→ACC)	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,671,700	G→A	5.3%	V22M (GTG→ATG) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,671,701	T→C	5.4%	V22A (GTG→GCG) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,671,702	G→C	5.2%	V22V (GTG→GTC) ‡	nuoN →	NADH‑quinone oxidoreductase subunit N
RA	4,675,517	G→C	5.3%	P107P (CCG→CCC)	PP_4137 →	outer membrane siderophore receptor
RA	4,675,518	G→C	5.3%	G108R (GGG→CGG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,675,519	G→C	5.3%	G108A (GGG→GCG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,677,303	T→G	6.7%	intergenic (+34/+70)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,677,305	G→T	9.6%	intergenic (+36/+68)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,707,294	A→C	10.2%	intergenic (‑64/+113)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,302	A→C	11.9%	intergenic (‑72/+105)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,381	T→A	12.8%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,382	T→A	12.2%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,392	A→G	10.6%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,393	G→A	8.3%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,717,084	T→C	69.3%	F116S (TTC→TCC)	PP_4173 →	two‑component system sensor histidine kinase/response regulator
RA	4,742,763	T→G	5.9%	intergenic (+32/+720)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,806	C→G	28.3%	intergenic (+75/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,808	T→A	28.3%	intergenic (+77/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,809	T→A	26.9%	intergenic (+78/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,742,811	C→G	28.5%	intergenic (+80/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,195:1	+C	100%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,197	A→G	100%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,199	C→T	100%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,202	C→T	100%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,205	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,207	2 bp→CT	100%	intergenic (+476/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,221	C→T	100%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,223	A→C	100%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,743,226	2 bp→GC	100%	intergenic (+495/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,748,064	C→G	5.6%	L305L (CTG→CTC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,073	A→C	5.5%	V302V (GTT→GTG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,075	C→A	5.5%	V302F (GTT→TTT) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,077	G→A	5.6%	A301V (GCG→GTG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,079	T→G	5.8%	E300D (GAA→GAC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,080	T→G	5.5%	E300A (GAA→GCA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,081	C→T	5.6%	E300K (GAA→AAA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,085	C→G	6.4%	L298L (CTG→CTC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,088	G→A	6.0%	D297D (GAC→GAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,091	A→G	5.6%	A296A (GCT→GCC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,092	G→C	6.7%	A296G (GCT→GGT) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,097	C→G	6.8%	L294L (CTG→CTC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,103	G→A	11.6%	Y292Y (TAC→TAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,106	G→A	11.6%	D291D (GAC→GAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,109	G→A	8.0%	A290A (GCC→GCT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,112	C→A	6.8%	V289V (GTG→GTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,127	C→T	10.6%	A284A (GCG→GCA)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,148	C→G	10.7%	A277A (GCG→GCC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,151	C→A	16.6%	V276V (GTG→GTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,154	G→A	12.4%	I275I (ATC→ATT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,157	C→G	10.6%	V274V (GTG→GTC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,160	T→G	23.8%	K273N (AAA→AAC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,161	T→C	23.5%	K273R (AAA→AGA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,162	T→G	23.5%	K273Q (AAA→CAA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,163	G→T	10.7%	S272S (TCC→TCA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,164	G→C	12.5%	S272C (TCC→TGC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,165	A→T	12.3%	S272T (TCC→ACC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,169	T→C	10.9%	K270K (AAA→AAG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,178	G→C	14.0%	A267A (GCC→GCG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,184	G→A	23.5%	H265H (CAC→CAT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,196	G→A	11.6%	G261G (GGC→GGT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,199	G→C	10.8%	S260S (TCC→TCG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,202	G→A	11.4%	I259I (ATC→ATT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,205	A→G	9.8%	G258G (GGT→GGC)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,211	G→A	13.3%	A256A (GCC→GCT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,220	C→A	21.6%	L253L (CTG→CTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,223	C→T	9.5%	Q252Q (CAG→CAA) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,225	G→C	21.5%	Q252E (CAG→GAG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,226	T→C	12.9%	P251P (CCA→CCG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,229	C→T	21.4%	A250A (GCG→GCA)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,235	G→C	20.0%	I248M (ATC→ATG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,237	T→C	20.2%	I248V (ATC→GTC) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,244	G→C	10.2%	T245T (ACC→ACG)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,253	G→A	6.1%	V242V (GTC→GTT)	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,260	A→C	6.9%	M240R (ATG→AGG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,748,261	T→A	7.0%	M240L (ATG→TTG) ‡	etfA ←	electron transfer flavoprotein subunit alpha
RA	4,769,785	C→T	7.5%	intergenic (+32/+37)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,769,786	A→G	7.1%	intergenic (+33/+36)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,798,571	A→G	8.9%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,579	C→T	13.6%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,581	G→C	14.6%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,584	G→C	14.7%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,586	A→G	14.9%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,594	C→T	12.0%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,808,082	A→T	5.3%	S593T (TCG→ACG)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,808,083	A→T	5.4%	R592R (CGT→CGA)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,834,021	A→T	5.8%	intergenic (+29/+123)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,834,024	T→A	5.6%	intergenic (+32/+120)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,834,027	A→T	5.7%	intergenic (+35/+117)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,834,035	C→G	5.2%	intergenic (+43/+109)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,841,188	C→G	8.6%	intergenic (+43/‑137)	ccoP‑I → / → PP_4254	cbb3‑type cytochrome c oxidase subunit/hypothetical protein
RA	4,841,191	C→G	8.7%	intergenic (+46/‑134)	ccoP‑I → / → PP_4254	cbb3‑type cytochrome c oxidase subunit/hypothetical protein
RA	4,844,863	Δ1 bp	29.9%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,844,871:1	+G	32.5%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,863,120	C→T	7.4%	intergenic (‑104/+133)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,124	A→G	8.7%	intergenic (‑108/+129)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,126	G→T	7.0%	intergenic (‑110/+127)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,127	G→A	7.2%	intergenic (‑111/+126)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,129	G→A	7.3%	intergenic (‑113/+124)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,134	Δ1 bp	7.3%	intergenic (‑118/+119)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,145:1	+A	7.3%	intergenic (‑129/+108)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,146	G→T	7.2%	intergenic (‑130/+107)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,150	A→T	8.5%	intergenic (‑134/+103)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,151	T→C	8.9%	intergenic (‑135/+102)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,153	T→C	9.2%	intergenic (‑137/+100)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,154	A→C	11.2%	intergenic (‑138/+99)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,156	C→T	9.6%	intergenic (‑140/+97)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,863,160	A→G	11.4%	intergenic (‑144/+93)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,872,149	C→T	8.7%	Y644Y (TAC→TAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,150	A→G	8.9%	K645E (AAG→GAG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,151	A→T	8.9%	K645M (AAG→ATG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,153	A→G	8.5%	M646V (ATG→GTG)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,156	T→G	9.1%	L647V (TTG→GTG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,157	T→A	8.7%	L647* (TTG→TAG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,162	G→A	8.7%	A649T (GCC→ACC)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,167	C→T	8.6%	D650D (GAC→GAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,170	C→T	8.7%	I651I (ATC→ATT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,173	G→T	8.5%	L652L (CTG→CTT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,179	C→T	8.7%	D654D (GAC→GAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,180	G→A	8.7%	V655M (GTG→ATG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,181	T→C	8.5%	V655A (GTG→GCG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,186	G→C	8.6%	D657H (GAT→CAT) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,187	A→G	8.6%	D657G (GAT→GGT) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,199	C→G	8.7%	P661R (CCT→CGT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,202	C→T	8.6%	A662V (GCG→GTG)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,206	C→T	8.6%	I663I (ATC→ATT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,209	C→T	8.7%	D664D (GAC→GAT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,212	C→T	8.6%	I665I (ATC→ATT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,215	C→T	8.6%	G666G (GGC→GGT)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,224	G→A	8.6%	E669E (GAG→GAA)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,227	T→C	8.8%	G670G (GGT→GGC)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,230	T→C	9.0%	G671G (GGT→GGC)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,234	A→G	8.6%	I673V (ATC→GTC) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,236	C→G	8.8%	I673M (ATC→ATG) ‡	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,872,260	C→G	5.2%	T681T (ACC→ACG)	xdhB →	xanthine dehydrogenase subunit XdhB
RA	4,891,610	A→C	5.7%	intergenic (+89/‑64)	hyi → / → glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
RA	4,898,366	T→C	12.4%	intergenic (+32/‑176)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,902,032	A→G	16.3%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,036	G→A	15.5%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,037	T→C	15.4%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,041	C→T	15.7%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,908,430	A→T	5.2%	L112Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,908,433	A→T	5.1%	L111Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,909,992	G→C	5.3%	intergenic (‑1/‑281)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,909,993	G→C	5.7%	intergenic (‑2/‑280)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,938,593	G→C	5.5%	intergenic (‑37/‑381)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,938,595	G→C	5.6%	intergenic (‑39/‑379)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,938,597	G→C	5.4%	intergenic (‑41/‑377)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,952,939	T→G	22.5%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,952,940	C→A	12.1%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,962,934	G→C	5.8%	intergenic (‑149/+115)	fliE ← / ← atoC	flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
RA	4,990,332	G→C	6.8%	intergenic (+32/+62)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,990,333	C→A	7.0%	intergenic (+33/+61)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,990,334	T→G	6.8%	intergenic (+34/+60)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,990,335	G→C	6.8%	intergenic (+35/+59)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	5,030,713	G→A	7.2%	E337E (GAG→GAA)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,731	C→T	7.2%	R343R (CGC→CGT)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,734	G→C	7.0%	P344P (CCG→CCC)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,735	A→G	6.9%	S345G (AGC→GGC)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,741	A→C	7.0%	N347H (AAC→CAC) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,742	A→G	7.0%	N347S (AAC→AGC) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,745	G→C	6.9%	S348T (AGC→ACC) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,746	C→G	6.8%	S348R (AGC→AGG) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,748	T→A	6.7%	V349E (GTG→GAG) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,749	G→A	6.8%	V349V (GTG→GTA) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,750	C→T	7.6%	L350F (CTC→TTC) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,752	C→G	7.0%	L350L (CTC→CTG) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,753	A→C	7.0%	K351Q (AAA→CAA) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,755	A→G	6.9%	K351K (AAA→AAG) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,758	T→C	6.6%	P352P (CCT→CCC)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,761	T→C	7.3%	G353G (GGT→GGC)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,770	C→T	6.4%	F356F (TTC→TTT)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,773	C→T	6.4%	H357H (CAC→CAT)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,780	C→A	6.5%	P360T (CCT→ACT) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,782	T→A	6.3%	P360P (CCT→CCA) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,785	C→T	6.4%	G361G (GGC→GGT)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,788	A→C	6.8%	L362L (CTA→CTC)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,792	A→C	6.9%	M364L (ATG→CTG)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,797	T→A	6.8%	D365E (GAT→GAA)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,798	G→A	6.9%	D366N (GAT→AAT) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,799	A→C	6.6%	D366A (GAT→GCT) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,800	T→C	6.7%	D366D (GAT→GAC) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,801	T→A	6.4%	W367R (TGG→AGG) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,802	G→T	6.6%	W367L (TGG→TTG) ‡	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,828	C→G	7.2%	L376V (CTG→GTG)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,836	T→C	5.8%	T378T (ACT→ACC)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,839	T→A	5.1%	D379E (GAT→GAA)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,043,165	C→G	5.7%	intergenic (+173/‑489)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,043,168	C→T	5.6%	intergenic (+176/‑486)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,043,170	T→A	5.7%	intergenic (+178/‑484)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,043,172	A→G	5.8%	intergenic (+180/‑482)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,043,175	C→G	6.1%	intergenic (+183/‑479)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,070,301	C→G	7.3%	G325A (GGT→GCT) ‡	PP_4465 ←	porin
RA	5,070,302	C→G	7.4%	G325R (GGT→CGT) ‡	PP_4465 ←	porin
RA	5,081,096	T→A	6.3%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,081,099	T→A	6.3%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,081,399	G→T	8.6%	intergenic (‑51/+24)	PP_t55 ← / ← PP_t54	tRNA‑Arg/tRNA‑Arg
RA	5,094,544	G→C	7.0%	intergenic (‑270/+67)	astC ← / ← PP_4482	acetylornithine aminotransferase/AraC family transcriptional regulator
RA	5,094,545	T→C	6.9%	intergenic (‑271/+66)	astC ← / ← PP_4482	acetylornithine aminotransferase/AraC family transcriptional regulator
RA	5,094,546	G→A	7.1%	intergenic (‑272/+65)	astC ← / ← PP_4482	acetylornithine aminotransferase/AraC family transcriptional regulator
RA	5,094,547	G→C	7.1%	intergenic (‑273/+64)	astC ← / ← PP_4482	acetylornithine aminotransferase/AraC family transcriptional regulator
RA	5,099,217	A→C	8.8%	intergenic (+238/+54)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,099,220	G→C	7.6%	intergenic (+241/+51)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,100,324	G→A	5.9%	C346C (TGC→TGT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,333	C→A	6.1%	V343V (GTG→GTT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,336	C→A	5.7%	E342D (GAG→GAT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,342	C→G	5.7%	P340P (CCG→CCC) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,343	G→T	5.8%	P340Q (CCG→CAG) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,344	G→C	5.8%	P340A (CCG→GCG) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,345	A→G	5.9%	R339R (CGT→CGC) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,346	C→T	5.9%	R339H (CGT→CAT) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,348	G→A	5.9%	Y338Y (TAC→TAT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,351	A→G	5.9%	D337D (GAT→GAC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,357	C→G	5.5%	V335V (GTG→GTC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,360	C→A	5.5%	R334R (CGG→CGT) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,361	C→T	5.5%	R334Q (CGG→CAG) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,362	G→A	5.4%	R334W (CGG→TGG) ‡	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,365	C→G	5.2%	E333Q (GAA→CAA)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,369	G→C	5.5%	T331T (ACC→ACG)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,374	G→T	5.4%	L330M (CTG→ATG)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,377	C→A	5.3%	A329S (GCG→TCG)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,378	G→A	5.4%	A328A (GCC→GCT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,381	G→A	5.3%	Y327Y (TAC→TAT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,384	A→G	5.3%	V326V (GTT→GTC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,387	C→G	5.2%	L325L (CTG→CTC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,390	G→A	5.4%	Y324Y (TAC→TAT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,393	A→G	5.4%	G323G (GGT→GGC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,399	T→G	5.2%	T321T (ACA→ACC)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,408	C→A	5.4%	L318L (CTG→CTT)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,420	C→T	5.2%	P314P (CCG→CCA)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,100,432	G→C	5.3%	S310S (TCC→TCG)	acsA‑I ←	acetyl‑CoA synthetase
RA	5,101,905	T→G	10.7%	intergenic (+21/+132)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,101,957	A→C	6.7%	intergenic (+73/+80)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,110,875	C→T	5.9%	H214H (CAC→CAT)	PP_4494 →	LysR family transcriptional regulator
RA	5,110,878	G→C	6.2%	R215R (CGG→CGC)	PP_4494 →	LysR family transcriptional regulator
RA	5,110,879	G→C	6.2%	A216P (GCG→CCG)	PP_4494 →	LysR family transcriptional regulator
RA	5,110,882	A→G	6.0%	M217V (ATG→GTG)	PP_4494 →	LysR family transcriptional regulator
RA	5,127,094	T→G	12.2%	intergenic (+98/‑84)	PP_4511 → / → PP_4512	AraC family transcriptional regulator/DMT superfamily permease
RA	5,151,406	C→G	7.3%	intergenic (‑422/+26)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,407	T→G	7.3%	intergenic (‑423/+25)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,410	C→A	6.9%	intergenic (‑426/+22)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,411	C→G	7.0%	intergenic (‑427/+21)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,151,414	C→T	7.1%	intergenic (‑430/+18)	PP_mr51 ← / ← PP_4535	C4 ncRNA/hypothetical protein
RA	5,164,566	T→G	7.6%	intergenic (+119/+82)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,164,567	A→T	5.9%	intergenic (+120/+81)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,164,568	T→A	10.2%	intergenic (+121/+80)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,164,585	A→G	6.1%	intergenic (+138/+63)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,164,592	C→G	7.6%	intergenic (+145/+56)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,164,597	C→A	5.9%	intergenic (+150/+51)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,175,214	T→C	12.5%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,175,217	G→C	10.9%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,175,218	G→C	11.3%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,175,221	G→A	10.9%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,181,982	C→G	5.4%	intergenic (‑240/‑43)	PP_4557 ← / → PP_4558	hypothetical protein/GNAT family acetyltransferase
RA	5,184,029	G→T	7.9%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,035	T→G	12.3%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,036	C→A	11.3%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,184,042	A→C	12.6%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,189,938	A→G	6.6%	E158G (GAG→GGG)	PP_4567 →	hypothetical protein
RA	5,189,942	A→T	7.4%	E159D (GAA→GAT)	PP_4567 →	hypothetical protein
RA	5,189,949	T→G	7.8%	L162V (TTG→GTG) ‡	PP_4567 →	hypothetical protein
RA	5,189,950	T→C	7.8%	L162S (TTG→TCG) ‡	PP_4567 →	hypothetical protein
RA	5,189,953	G→A	7.8%	R163H (CGC→CAC) ‡	PP_4567 →	hypothetical protein
RA	5,189,954	C→A	7.6%	R163R (CGC→CGA) ‡	PP_4567 →	hypothetical protein
RA	5,189,961	A→T	7.3%	I166F (ATC→TTC)	PP_4567 →	hypothetical protein
RA	5,189,965	C→T	5.6%	P167L (CCC→CTC)	PP_4567 →	hypothetical protein
RA	5,194,729	T→G	9.2%	intergenic (+140/‑62)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,194,737	C→G	7.1%	intergenic (+148/‑54)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,196,857	T→G	10.8%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,196,858	C→A	9.5%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,212,226	A→C	5.8%	intergenic (‑122/+56)	rnd ← / ← PP_4592	ribonuclease D/metal dependent hydrolase
RA	5,214,457	A→G	8.1%	intergenic (+51/+43)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,458	C→A	8.1%	intergenic (+52/+42)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,461	T→G	8.3%	intergenic (+55/+39)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,462	C→T	8.3%	intergenic (+56/+38)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,474	T→C	6.8%	intergenic (+68/+26)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,214,477	A→G	5.4%	intergenic (+71/+23)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,231,161	Δ1 bp	11.3%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,165	C→G	10.8%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,168	C→G	11.3%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,231,171:1	+C	12.4%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,241,854	G→A	5.7%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,241,859	T→C	5.1%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,259,841	T→C	5.0%	intergenic (‑70/+74)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,842	G→A	5.3%	intergenic (‑71/+73)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,259,844	A→G	5.1%	intergenic (‑73/+71)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,270,371	T→A	5.5%	A329A (GCT→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,380	C→T	8.0%	G332G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,381	G→C	8.0%	V333L (GTG→CTG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,383	G→T	7.6%	V333V (GTG→GTT) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,390	G→A	8.4%	V336M (GTG→ATG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,392	G→C	8.4%	V336V (GTG→GTC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,393	G→A	8.4%	V337I (GTA→ATA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,394	T→C	8.3%	V337A (GTA→GCA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,401	C→T	9.5%	G339G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,402	T→C	9.7%	L340L (TTG→CTG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,404	G→T	9.9%	L340F (TTG→TTT) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,410	A→T	12.5%	P342P (CCA→CCT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,413	C→A	12.1%	V343V (GTC→GTA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,419	C→A	12.9%	G345G (GGC→GGA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,432	G→T	13.6%	A350S (GCC→TCC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,433	C→G	13.5%	A350G (GCC→GGC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,434	C→T	13.6%	A350A (GCC→GCT) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,437	G→T	13.2%	V351V (GTG→GTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,440	T→G	13.0%	P352P (CCT→CCG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,441	A→C	13.1%	T353P (ACC→CCC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,443	C→A	13.2%	T353T (ACC→ACA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,444	C→G	13.3%	P354A (CCG→GCG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,446	G→A	13.1%	P354P (CCG→CCA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,449	A→G	13.3%	V355V (GTA→GTG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,455	C→T	15.1%	G357G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,458	C→T	15.2%	G358G (GGC→GGT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,479	C→A	19.7%	G365G (GGC→GGA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,482	C→G	19.6%	T366T (ACC→ACG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,485	G→T	19.7%	V367V (GTG→GTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,488	G→C	19.8%	A368A (GCG→GCC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,491	C→A	19.3%	A369A (GCC→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,497	T→C	22.7%	G371G (GGT→GGC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,506	C→A	23.8%	T374T (ACC→ACA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,509	G→T	23.2%	L375L (CTG→CTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,512	C→A	21.8%	S376S (TCC→TCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,519	A→G	21.9%	S379G (AGC→GGC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,520	G→A	22.2%	S379N (AGC→AAC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,524	C→T	21.9%	Y380Y (TAC→TAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,525	A→C	22.0%	K381Q (AAG→CAG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,534	G→A	23.4%	V384I (GTC→ATC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,539	C→T	22.6%	N385N (AAC→AAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,548	C→T	21.6%	I388I (ATC→ATT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,551	C→G	21.0%	V389V (GTC→GTG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,554	G→T	20.7%	A390A (GCG→GCT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,555	G→A	20.5%	A391T (GCC→ACC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,560	G→C	20.1%	S392S (TCG→TCC)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,561	C→A	20.0%	L393M (CTG→ATG) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,563	G→C	20.8%	L393L (CTG→CTC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,587	C→A	20.1%	A401A (GCC→GCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,593	G→A	18.3%	P403P (CCG→CCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,594	A→G	18.1%	T404A (ACC→GCC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,595	C→A	18.2%	T404N (ACC→AAC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,596	C→A	18.1%	T404T (ACC→ACA) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,605	C→T	17.3%	H407H (CAC→CAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,608	C→G	16.9%	H408Q (CAC→CAG)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,615	A→G	13.7%	N411D (AAC→GAC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,616	A→C	13.7%	N411T (AAC→ACC) ‡	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,623	C→T	12.2%	F413F (TTC→TTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,626	G→A	12.1%	E414E (GAG→GAA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,632	C→T	11.5%	I416I (ATC→ATT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,635	C→T	11.7%	F417F (TTC→TTT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,638	C→T	10.7%	H418H (CAC→CAT)	PP_4643 →	xanthine/uracil permease family protein
RA	5,270,641	C→A	7.3%	S419S (TCC→TCA)	PP_4643 →	xanthine/uracil permease family protein
RA	5,276,033	C→A	10.8%	intergenic (+85/+21)	rlmG → / ← PP_4649	ribosomal RNA large subunit methyltransferase G/hypothetical protein
RA	5,309,835	T→C	46.2%	noncoding (2725/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,855	G→T	50.0%	noncoding (2705/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,858	A→T	47.0%	noncoding (2702/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,864	A→G	73.4%	noncoding (2696/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,865	C→T	81.8%	noncoding (2695/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,870	G→A	81.8%	noncoding (2690/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,871	T→C	73.0%	noncoding (2689/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,878	C→A	80.1%	noncoding (2682/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,881	A→T	88.9%	noncoding (2679/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,882	A→C	72.3%	noncoding (2678/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,889	A→C	18.2%	noncoding (2671/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,891	G→A	70.5%	noncoding (2669/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,893	T→A	79.4%	noncoding (2667/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,919	G→A	16.7%	noncoding (2641/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,926	C→A	75.2%	noncoding (2634/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,931	C→A	72.2%	noncoding (2629/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,936	A→T	72.1%	noncoding (2624/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,937	T→A	72.5%	noncoding (2623/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,945	G→A	69.2%	noncoding (2615/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,952	G→A	27.3%	noncoding (2608/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,954	A→G	27.3%	noncoding (2606/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,985	A→G	88.9%	noncoding (2575/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,992	G→A	65.9%	noncoding (2568/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,309,996	G→A	68.5%	noncoding (2564/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,003	A→G	84.5%	noncoding (2557/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,037	G→T	35.9%	noncoding (2523/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,055	T→C	79.5%	noncoding (2505/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,062	C→T	32.4%	noncoding (2498/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,082	A→C	43.1%	noncoding (2478/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,083	C→A	50.2%	noncoding (2477/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,094	A→G	35.5%	noncoding (2466/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,109	G→T	54.4%	noncoding (2451/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,110	T→C	58.6%	noncoding (2450/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,113	C→A	34.7%	noncoding (2447/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,130	A→C	54.8%	noncoding (2430/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,134	C→G	34.9%	noncoding (2426/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,164	T→C	43.8%	noncoding (2396/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,165	A→G	61.6%	noncoding (2395/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,167	A→G	59.8%	noncoding (2393/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,169	A→G	43.3%	noncoding (2391/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,185	A→T	42.9%	noncoding (2375/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,190	T→G	55.6%	noncoding (2370/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,199	A→C	75.0%	noncoding (2361/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,200	C→T	73.8%	noncoding (2360/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,210	G→T	68.8%	noncoding (2350/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,214	T→C	74.1%	noncoding (2346/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,215	T→A	68.8%	noncoding (2345/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,220	C→T	68.8%	noncoding (2340/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,228	A→G	68.8%	noncoding (2332/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,231	G→A	68.8%	noncoding (2329/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,232	C→G	69.2%	noncoding (2328/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,237	T→A	69.8%	noncoding (2323/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,310,242	T→A	65.5%	noncoding (2318/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,312,050	A→T	50.5%	noncoding (510/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,312,251	G→A	81.0%	noncoding (309/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,312,252	C→A	81.0%	noncoding (308/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,312,253	A→C	81.8%	noncoding (307/2902 nt)	PP_23SG ←	23S ribosomal RNA
RA	5,313,359	A→C	48.3%	noncoding (1293/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,360	C→G	44.8%	noncoding (1292/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,362	G→A	46.7%	noncoding (1290/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,378	T→A	42.1%	noncoding (1274/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,379	C→G	50.8%	noncoding (1273/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,381	G→C	48.4%	noncoding (1271/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,386	G→A	43.8%	noncoding (1266/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,387	Δ1 bp	50.0%	noncoding (1265/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,389	A→G	43.7%	noncoding (1263/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,394	A→T	46.6%	noncoding (1258/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,399	C→G	58.6%	noncoding (1253/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,401	C→A	38.3%	noncoding (1251/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,407:1	+T	38.5%	noncoding (1245/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,409	C→T	53.8%	noncoding (1243/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,420	T→A	39.8%	noncoding (1232/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,421	C→T	56.0%	noncoding (1231/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,425	A→C	40.1%	noncoding (1227/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,426	C→A	39.9%	noncoding (1226/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,428	G→A	59.2%	noncoding (1224/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,429	A→T	56.0%	noncoding (1223/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,455	G→C	43.4%	noncoding (1197/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,456	C→T	52.2%	noncoding (1196/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,777	G→A	62.5%	noncoding (875/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,795	T→A	62.5%	noncoding (857/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,796	C→A	63.7%	noncoding (856/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,797	A→T	62.7%	noncoding (855/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,798	A→G	62.5%	noncoding (854/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,799	C→T	65.6%	noncoding (853/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,821	T→C	68.7%	noncoding (831/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,822	A→G	71.8%	noncoding (830/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,825	A→G	66.7%	noncoding (827/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,826	T→A	66.7%	noncoding (826/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,827	C→G	66.9%	noncoding (825/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,829	Δ1 bp	66.7%	noncoding (823/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,847	G→A	71.4%	noncoding (805/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,848	T→C	71.4%	noncoding (804/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,849	T→A	71.4%	noncoding (803/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,850	G→T	71.5%	noncoding (802/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,313,851	A→T	71.4%	noncoding (801/1522 nt)	PP_16SG ←	16S ribosomal RNA
RA	5,315,246	C→G	6.2%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,315,249	C→G	5.7%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,318,356	C→G	5.1%	M238I (ATG→ATC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,359	G→C	5.1%	L237L (CTC→CTG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,371	C→G	5.7%	L233L (CTG→CTC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,379	G→T	5.7%	L231M (CTG→ATG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,380	C→T	5.7%	E230E (GAG→GAA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,401	G→A	10.5%	A223A (GCC→GCT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,410	C→T	10.4%	P220P (CCG→CCA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,413	C→T	10.7%	A219A (GCG→GCA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,419	G→A	10.3%	G217G (GGC→GGT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,434	G→A	6.8%	T212T (ACC→ACT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,435	G→A	6.8%	T212I (ACC→ATC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,436	T→C	6.7%	T212A (ACC→GCC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,440	G→A	6.7%	F210F (TTC→TTT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,446	G→T	6.5%	A208A (GCC→GCA) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,448	C→T	6.7%	A208T (GCC→ACC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,449	T→G	6.7%	K207N (AAA→AAC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,450	T→C	6.7%	K207R (AAA→AGA) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,451	T→G	7.0%	K207Q (AAA→CAA) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,452	G→A	6.6%	V206V (GTC→GTT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,454	C→T	6.6%	V206I (GTC→ATC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,455	C→G	6.6%	L205L (CTG→CTC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,458	C→T	6.6%	E204E (GAG→GAA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,461	G→A	6.6%	V203V (GTC→GTT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,464	G→A	6.6%	T202T (ACC→ACT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,465	G→A	6.6%	T202I (ACC→ATC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,466	T→C	6.6%	T202A (ACC→GCC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,467	A→G	6.5%	G201G (GGT→GGC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,470	G→A	6.6%	G200G (GGC→GGT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,473	A→G	6.6%	C199C (TGT→TGC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,476	C→A	6.7%	L198L (CTG→CTT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,503	G→A	10.6%	T189T (ACC→ACT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,510	G→C	11.0%	T187S (ACC→AGC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,511	T→A	11.0%	T187S (ACC→TCC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,512	T→C	10.7%	E186E (GAA→GAG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,515	G→T	10.6%	D185E (GAC→GAA)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,533	G→A	5.4%	I179I (ATC→ATT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,536	G→A	5.4%	I178I (ATC→ATT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,538	T→C	5.4%	I178V (ATC→GTC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,539	A→G	5.2%	G177G (GGT→GGC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,542	G→C	5.4%	T176T (ACC→ACG) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,544	T→A	5.7%	T176S (ACC→TCC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,548	G→A	5.3%	G174G (GGC→GGT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,551	A→G	5.5%	G173G (GGT→GGC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,557	T→A	5.4%	V171V (GTA→GTT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,569	A→G	5.2%	Y167Y (TAT→TAC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,572	G→A	5.2%	S166S (TCC→TCT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,578	T→A	5.2%	A164A (GCA→GCT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,583	Δ1 bp	5.3%	coding (487/1017 nt)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,585	T→A	5.2%	N162I (AAC→ATC)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,588	T→A	5.3%	K161M (AAG→ATG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,590:1	+T	5.4%	coding (480/1017 nt)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,599	G→C	5.8%	S157S (TCC→TCG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,605	G→A	5.5%	D155D (GAC→GAT)	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,611	G→A	5.9%	Y153Y (TAC→TAT) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,613	A→G	5.4%	Y153H (TAC→CAC) ‡	ilvC ←	ketol‑acid reductoisomerase
RA	5,318,617	A→C	5.4%	A151A (GCT→GCG)	ilvC ←	ketol‑acid reductoisomerase
RA	5,331,366	T→A	5.9%	L10Q (CTG→CAG)	PP_4690 →	Rieske 2Fe‑2S family protein
RA	5,334,215	C→G	5.1%	intergenic (+28/‑21)	dksA → / → gluQ	RNA polymerase‑binding transcription factor DksA/glutamyl‑Q tRNA(Asp) synthetase
RA	5,340,020	C→G	8.8%	intergenic (+57/‑227)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,340,023	C→G	8.9%	intergenic (+60/‑224)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,346,431:1	+C	6.4%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,431:2	+T	6.4%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,437	C→G	10.4%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,441	C→T	13.9%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,450	A→G	13.6%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,454	C→G	17.2%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,459	Δ1 bp	13.7%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,346,460	Δ1 bp	13.4%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,348,920	T→G	8.8%	D124E (GAT→GAG)	PP_4703 →	hypothetical protein
RA	5,348,932	T→G	6.4%	Y128* (TAT→TAG)	PP_4703 →	hypothetical protein
RA	5,353,312	A→C	9.7%	intergenic (+21/+55)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,353,315	G→T	9.7%	intergenic (+24/+52)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,353,950	A→C	5.8%	intergenic (‑233/+31)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,355,781	C→A	5.9%	L102L (CTG→CTT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,787	A→G	7.6%	R100R (CGT→CGC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,814	G→A	7.4%	T91T (ACC→ACT) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,815	G→A	7.4%	T91I (ACC→ATC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,816	T→C	7.3%	T91A (ACC→GCC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,820	C→A	7.3%	T89T (ACG→ACT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,823	C→T	7.4%	E88E (GAG→GAA)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,826	T→G	7.4%	K87N (AAA→AAC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,833	G→C	7.2%	S85C (TCC→TGC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,834	A→T	6.8%	S85T (TCC→ACC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,835	A→T	7.0%	P84P (CCT→CCA)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,841	G→A	7.1%	G82G (GGC→GGT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,847	A→G	7.0%	R80R (CGT→CGC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,859	G→A	7.0%	G76G (GGC→GGT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,880	G→T	7.7%	A69A (GCC→GCA)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,886	G→A	7.7%	T67T (ACC→ACT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,898	G→A	7.5%	Y63Y (TAC→TAT)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,903	G→T	5.2%	H62N (CAC→AAC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,904	A→G	5.1%	V61V (GTT→GTC)	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,907	C→G	5.3%	S60S (TCG→TCC) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,355,909	A→T	5.3%	S60T (TCG→ACG) ‡	pnp ←	polyribonucleotide nucleotidyltransferase
RA	5,366,533	A→T	5.0%	V24D (GTC→GAC)	folP ←	dihydropteroate synthase
RA	5,367,624	G→A	5.1%	A301V (GCC→GTC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,677	C→A	7.3%	L283F (TTG→TTT) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,679	A→G	7.4%	L283L (TTG→CTG) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,686	G→C	10.3%	L280L (CTC→CTG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,689	G→C	10.4%	T279T (ACC→ACG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,692	T→C	10.5%	Q278Q (CAA→CAG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,695	C→T	11.0%	E277E (GAG→GAA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,698	A→G	10.6%	R276R (CGT→CGC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,701	C→T	10.5%	E275E (GAG→GAA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,709	G→T	13.4%	H273N (CAC→AAC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,710	A→G	13.3%	G272G (GGT→GGC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,719	C→A	14.7%	M269I (ATG→ATT) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,721	T→G	14.6%	M269L (ATG→CTG) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,722	G→A	14.6%	G268G (GGC→GGT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,728	G→A	16.8%	G266G (GGC→GGT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,734	A→G	16.8%	H264H (CAT→CAC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,743	A→G	18.8%	V261V (GTT→GTC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,776	C→A	19.7%	P250P (CCG→CCT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,779	G→C	20.0%	A249A (GCC→GCG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,782	G→A	19.9%	H248H (CAC→CAT) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,784	G→T	19.7%	H248N (CAC→AAC) ‡	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,797	C→T	20.3%	E243E (GAG→GAA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,809	G→A	19.3%	R239R (CGC→CGT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,812	C→G	18.4%	V238V (GTG→GTC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,815	A→G	17.7%	R237R (CGT→CGC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,821	G→T	15.1%	A235A (GCC→GCA)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,827	G→A	12.6%	V233V (GTC→GTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,833	C→G	12.6%	V231V (GTG→GTC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,836	G→A	11.8%	F230F (TTC→TTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,845	C→A	10.3%	V227V (GTG→GTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,848	G→A	7.9%	F226F (TTC→TTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,854	C→A	7.0%	S224S (TCG→TCT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,860	G→A	6.8%	S222S (TCC→TCT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,367,866	G→C	5.3%	T220T (ACC→ACG)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,378,122	T→C	7.1%	Q471Q (CAA→CAG)	dnaK ←	chaperone protein DnaK
RA	5,378,125	C→T	7.1%	P470P (CCG→CCA)	dnaK ←	chaperone protein DnaK
RA	5,378,128	C→A	6.8%	V469V (GTG→GTT)	dnaK ←	chaperone protein DnaK
RA	5,378,134	G→A	7.4%	R467R (CGC→CGT)	dnaK ←	chaperone protein DnaK
RA	5,378,143	T→C	6.2%	P464P (CCA→CCG)	dnaK ←	chaperone protein DnaK
RA	5,378,153	T→C	8.1%	D461G (GAC→GGC)	dnaK ←	chaperone protein DnaK
RA	5,378,156	G→A	8.1%	A460V (GCT→GTT)	dnaK ←	chaperone protein DnaK
RA	5,378,158	C→G	8.1%	L459L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,169	T→G	9.3%	K456Q (AAG→CAG)	dnaK ←	chaperone protein DnaK
RA	5,378,173	C→G	9.0%	L454L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,176	C→G	8.7%	S453S (TCG→TCC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,177	G→A	9.1%	S453L (TCG→TTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,178	A→T	9.0%	S453T (TCG→ACG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,185	C→G	9.0%	Q450H (CAG→CAC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,187	G→C	9.1%	Q450E (CAG→GAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,188	C→G	9.2%	A449A (GCG→GCC)	dnaK ←	chaperone protein DnaK
RA	5,378,195	T→A	6.4%	Q447L (CAG→CTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,196	G→T	6.7%	Q447K (CAG→AAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,197	C→T	6.5%	K446K (AAG→AAA) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,199	T→C	6.5%	K446E (AAG→GAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,206	A→G	6.3%	G443G (GGT→GGC)	dnaK ←	chaperone protein DnaK
RA	5,378,209	T→C	6.5%	Q442Q (CAA→CAG)	dnaK ←	chaperone protein DnaK
RA	5,378,212	C→G	6.5%	L441L (CTG→CTC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,214	G→A	6.5%	L441L (CTG→TTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,219	T→C	6.7%	H439R (CAC→CGC)	dnaK ←	chaperone protein DnaK
RA	5,378,221	A→G	6.8%	I438I (ATT→ATC)	dnaK ←	chaperone protein DnaK
RA	5,378,224	G→C	6.9%	T437T (ACC→ACG)	dnaK ←	chaperone protein DnaK
RA	5,378,233	G→C	6.0%	S434R (AGC→AGG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,234	C→G	6.0%	S434T (AGC→ACC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,235	T→A	6.1%	S434C (AGC→TGC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,239	G→A	6.9%	N432N (AAC→AAT)	dnaK ←	chaperone protein DnaK
RA	5,378,245	G→T	6.4%	D430E (GAC→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,248	G→A	6.5%	A429A (GCC→GCT)	dnaK ←	chaperone protein DnaK
RA	5,378,251	A→G	6.2%	T428T (ACT→ACC)	dnaK ←	chaperone protein DnaK
RA	5,378,260	C→G	6.3%	V425V (GTG→GTC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,261	A→G	6.3%	V425A (GTG→GCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,262	C→T	6.3%	V425M (GTG→ATG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,284	G→C	7.3%	T417T (ACC→ACG)	dnaK ←	chaperone protein DnaK
RA	5,378,287	G→C	7.0%	T416T (ACC→ACG)	dnaK ←	chaperone protein DnaK
RA	5,378,293	C→G	6.0%	K414N (AAG→AAC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,294	T→C	6.0%	K414R (AAG→AGG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,295	T→G	6.0%	K414Q (AAG→CAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,296	C→T	6.0%	E413E (GAG→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,311	C→G	5.0%	M408I (ATG→ATC) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,313	T→A	5.0%	M408L (ATG→TTG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,338	C→G	5.3%	L399L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,716	C→A	6.0%	L273L (CTG→CTT)	dnaK ←	chaperone protein DnaK
RA	5,378,737	T→G	9.6%	A266A (GCA→GCC)	dnaK ←	chaperone protein DnaK
RA	5,378,740	G→A	9.9%	A265A (GCC→GCT)	dnaK ←	chaperone protein DnaK
RA	5,378,746	T→C	10.3%	K263K (AAA→AAG)	dnaK ←	chaperone protein DnaK
RA	5,378,749	C→G	9.7%	L262L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,378,752	A→G	9.9%	R261R (CGT→CGC)	dnaK ←	chaperone protein DnaK
RA	5,378,761	G→A	9.8%	A258A (GCC→GCT)	dnaK ←	chaperone protein DnaK
RA	5,378,764	C→A	9.8%	L257L (CTG→CTT)	dnaK ←	chaperone protein DnaK
RA	5,378,767	A→C	9.9%	P256P (CCT→CCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,768	G→T	9.9%	P256H (CCT→CAT) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,769	G→T	9.8%	P256T (CCT→ACT) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,770	A→G	10.0%	D255D (GAT→GAC)	dnaK ←	chaperone protein DnaK
RA	5,378,773	G→T	9.9%	N254K (AAC→AAA)	dnaK ←	chaperone protein DnaK
RA	5,378,779	C→A	10.0%	L252L (CTG→CTT)	dnaK ←	chaperone protein DnaK
RA	5,378,782	G→A	9.8%	D251D (GAC→GAT)	dnaK ←	chaperone protein DnaK
RA	5,378,785	C→G	9.8%	M250I (ATG→ATC)	dnaK ←	chaperone protein DnaK
RA	5,378,792	G→T	9.5%	S248* (TCG→TAG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,793	A→G	9.6%	S248P (TCG→CCG) ‡	dnaK ←	chaperone protein DnaK
RA	5,378,794	C→T	9.6%	E247E (GAG→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,797	T→C	10.4%	K246K (AAA→AAG)	dnaK ←	chaperone protein DnaK
RA	5,378,810	T→G	9.3%	D242A (GAC→GCC)	dnaK ←	chaperone protein DnaK
RA	5,378,812	G→A	9.4%	V241V (GTC→GTT)	dnaK ←	chaperone protein DnaK
RA	5,378,815	A→C	9.3%	L240L (CTT→CTG)	dnaK ←	chaperone protein DnaK
RA	5,378,818	G→A	9.3%	Y239Y (TAC→TAT)	dnaK ←	chaperone protein DnaK
RA	5,378,821	G→T	9.3%	D238E (GAC→GAA)	dnaK ←	chaperone protein DnaK
RA	5,378,826	T→C	9.1%	I237V (ATC→GTC)	dnaK ←	chaperone protein DnaK
RA	5,378,830	G→A	9.6%	R235R (CGC→CGT)	dnaK ←	chaperone protein DnaK
RA	5,378,839	G→A	7.4%	F232F (TTC→TTT)	dnaK ←	chaperone protein DnaK
RA	5,378,848	G→A	6.0%	G229G (GGC→GGT)	dnaK ←	chaperone protein DnaK
RA	5,378,851	A→G	5.9%	G228G (GGT→GGC)	dnaK ←	chaperone protein DnaK
RA	5,378,854	C→G	5.2%	L227L (CTG→CTC)	dnaK ←	chaperone protein DnaK
RA	5,383,237	T→C	6.6%	intergenic (+32/+33)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,383,238	T→A	6.5%	intergenic (+33/+32)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,383,239	G→A	6.5%	intergenic (+34/+31)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,384,385	A→T	5.7%	intergenic (+35/+98)	smpB → / ← pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
RA	5,384,386	A→T	5.2%	intergenic (+36/+97)	smpB → / ← pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
RA	5,432,362	A→G	11.8%	intergenic (‑74/+87)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,366	A→G	11.1%	intergenic (‑78/+83)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,367:1	+A	11.5%	intergenic (‑79/+82)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,374	Δ1 bp	11.0%	intergenic (‑86/+75)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,376	C→T	11.2%	intergenic (‑88/+73)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,432,380	C→T	10.9%	intergenic (‑92/+69)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,448,259	T→G	15.4%	L145R (CTG→CGG)	thiE →	thiamine‑phosphate synthase
RA	5,448,265	A→C	16.2%	E147A (GAG→GCG)	thiE →	thiamine‑phosphate synthase
RA	5,448,268	A→C	12.2%	Q148P (CAG→CCG)	thiE →	thiamine‑phosphate synthase
RA	5,453,582	A→G	7.2%	E48G (GAG→GGG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,453,586	C→G	7.0%	L49L (CTC→CTG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,453,590	C→T	6.3%	P51S (CCG→TCG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,460,862:1	+A	5.8%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,460,868	Δ1 bp	6.4%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,461,530	T→G	6.4%	intergenic (+18/‑22)	PP_4795 → / → holA	lipoprotein/DNA polymerase III subunit delta
RA	5,487,107	C→G	9.5%	intergenic (+43/‑104)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,108	T→G	9.3%	intergenic (+44/‑103)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,120	A→G	17.4%	intergenic (+56/‑91)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,123	A→G	23.5%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,124	T→C	20.2%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,129	G→A	21.2%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,132	T→C	26.3%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,137	G→A	15.8%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,138	C→T	15.3%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,487,141	C→T	14.8%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,491,750	A→C	6.3%	M88L (ATG→CTG) ‡	PP_4825 →	MarC family membrane protein
RA	5,491,751	T→A	6.3%	M88K (ATG→AAG) ‡	PP_4825 →	MarC family membrane protein
RA	5,491,752	G→T	6.4%	M88I (ATG→ATT) ‡	PP_4825 →	MarC family membrane protein
RA	5,494,819	C→T	6.1%	V389V (GTG→GTA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,824	C→T	6.3%	V388M (GTG→ATG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,826	G→A	6.2%	A387V (GCG→GTG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,831	C→A	6.2%	S385S (TCG→TCT) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,832	G→T	6.0%	S385* (TCG→TAG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,833	A→C	5.8%	S385A (TCG→GCG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,841	T→G	6.3%	Q382P (CAA→CCA) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,842	G→A	6.0%	Q382* (CAA→TAA) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,843	G→A	5.9%	A381A (GCC→GCT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,849	C→G	6.1%	L379L (CTG→CTC)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,855	G→A	6.4%	F377F (TTC→TTT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,858	G→T	6.6%	A376A (GCC→GCA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,864	T→G	7.1%	R374R (CGA→CGC)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,867	G→T	6.6%	A373A (GCC→GCA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,870	G→A	7.0%	R372R (CGC→CGT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,879	C→T	7.2%	E369E (GAG→GAA)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,882	T→C	7.1%	E368E (GAA→GAG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,888	G→A	6.6%	N366N (AAC→AAT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,897	G→C	7.1%	C363W (TGC→TGG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,898	C→A	7.0%	C363F (TGC→TTC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,899	A→T	7.1%	C363S (TGC→AGC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,900	G→A	7.1%	H362H (CAC→CAT)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,903	C→G	7.3%	L361L (CTG→CTC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,905	G→T	7.2%	L361M (CTG→ATG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,906	C→G	7.0%	V360V (GTG→GTC) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,908	C→T	6.9%	V360M (GTG→ATG) ‡	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,916	C→T	7.3%	G357D (GGC→GAC)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,494,918	G→C	7.5%	R356R (CGC→CGG)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,508,568	G→C	5.8%	intergenic (+57/‑142)	PP_4839 → / → cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
RA	5,510,677	C→T	7.0%	G104G (GGC→GGT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,686	A→G	8.6%	T107T (ACA→ACG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,689	C→G	9.1%	S108S (TCC→TCG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,701	G→A	11.2%	K112K (AAG→AAA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,704	T→G	11.4%	S113S (TCT→TCG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,710	G→C	11.2%	L115L (CTG→CTC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,716	G→C	11.1%	V117V (GTG→GTC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,720	G→A	11.6%	E119K (GAA→AAA) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,722	A→G	12.0%	E119E (GAA→GAG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,732	G→A	10.6%	G123S (GGC→AGC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,733	G→A	10.6%	G123D (GGC→GAC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,734	C→T	10.6%	G123G (GGC→GGT) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,735	C→A	10.9%	L124M (CTG→ATG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,737	G→T	10.8%	L124L (CTG→CTT) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,761	G→A	8.6%	E132E (GAG→GAA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,764	C→T	8.6%	G133G (GGC→GGT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,767	A→G	7.2%	E134E (GAA→GAG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,770	G→A	7.1%	E135E (GAG→GAA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,771	A→T	7.1%	M136L (ATG→TTG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,772	T→C	7.1%	M136T (ATG→ACG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,773	G→C	7.2%	M136I (ATG→ATC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,774	T→G	7.2%	S137A (TCG→GCG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,775	C→A	7.4%	S137* (TCG→TAG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,778	C→G	7.4%	P138R (CCG→CGG) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,779	G→C	7.3%	P138P (CCG→CCC) ‡	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,785	G→T	7.5%	V140V (GTG→GTT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,791	C→T	7.6%	Y142Y (TAC→TAT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,794	A→G	6.9%	T143T (ACA→ACG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,800	C→G	7.3%	A145A (GCC→GCG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,803	C→A	7.4%	A146A (GCC→GCA)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,510,815	A→G	6.0%	Q150Q (CAA→CAG)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,511,866	A→C	9.6%	Q32P (CAG→CCG)	urtB →	urea ABC transporter permease
RA	5,511,875	T→G	11.8%	L35R (CTG→CGG)	urtB →	urea ABC transporter permease
RA	5,531,330	C→G	5.3%	intergenic (‑574/+20)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,539,037	A→G	10.8%	intergenic (+44/+59)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,539,045	G→C	13.6%	intergenic (+52/+51)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,540,538	A→T	5.5%	intergenic (+58/+63)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,540,539	A→T	6.4%	intergenic (+59/+62)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,540,541	G→C	5.5%	intergenic (+61/+60)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,540,543	A→T	5.3%	intergenic (+63/+58)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,540,544	A→T	6.9%	intergenic (+64/+57)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,540,547	G→T	5.4%	intergenic (+67/+54)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,551,575	T→A	6.5%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,551,576	T→A	6.4%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,554,883	T→G	9.7%	intergenic (+576/+85)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,554,884	T→A	5.9%	intergenic (+577/+84)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,554,885	C→A	9.2%	intergenic (+578/+83)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,557,574	T→A	10.8%	intergenic (‑80/+94)	PP_4887 ← / ← PP_4888	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	5,571,840	C→G	5.4%	E128Q (GAG→CAG)	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,571,845	T→G	16.5%	N126T (AAC→ACC)	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,576,762	C→T	5.3%	D169N (GAC→AAC)	motB ←	flagellar motor rotation protein
RA	5,576,764	A→G	5.0%	F168S (TTC→TCC)	motB ←	flagellar motor rotation protein
RA	5,615,496	T→A	5.2%	A158A (GCT→GCA)	PP_4933 →	hypothetical protein
RA	5,615,502	G→C	5.4%	E160D (GAG→GAC)	PP_4933 →	hypothetical protein
RA	5,615,508	T→A	6.1%	G162G (GGT→GGA)	PP_4933 →	hypothetical protein
RA	5,616,676	A→C	5.1%	I273M (ATT→ATG)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,645,220	T→C	5.5%	intergenic (+32/‑91)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,234	G→A	8.6%	intergenic (+46/‑77)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,235	C→T	8.2%	intergenic (+47/‑76)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,236	A→G	8.3%	intergenic (+48/‑75)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,240	A→C	8.4%	intergenic (+52/‑71)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,243	G→T	8.7%	intergenic (+55/‑68)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,247	C→T	8.4%	intergenic (+59/‑64)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,248	A→G	8.3%	intergenic (+60/‑63)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,645,249	T→C	8.6%	intergenic (+61/‑62)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,654,932	G→A	6.6%	intergenic (‑60/+101)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,654,933	T→G	6.4%	intergenic (‑61/+100)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,654,936	A→T	8.5%	intergenic (‑64/+97)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,654,938	T→C	6.7%	intergenic (‑66/+95)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,654,939	G→A	6.8%	intergenic (‑67/+94)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,654,941	A→T	10.0%	intergenic (‑69/+92)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,654,944	C→A	7.0%	intergenic (‑72/+89)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,654,945	T→C	8.7%	intergenic (‑73/+88)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,657,599:1	+A	20.8%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,604	T→G	23.5%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,609	C→A	23.1%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,614	Δ1 bp	19.7%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,662,155	G→T	8.5%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,662,158	A→C	6.8%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,673,623	G→C	7.3%	intergenic (+69/‑101)	PP_4978 → / → PP_4979	hypothetical protein/substrate‑binding protein
RA	5,683,399	T→G	7.8%	intergenic (‑143/+65)	PP_4986 ← / ← PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
RA	5,683,451	T→A	8.2%	intergenic (‑195/+13)	PP_4986 ← / ← PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
RA	5,699,402	G→A	6.8%	D20N (GAC→AAC)	hslU →	protease HslVU ATPase subunit
RA	5,699,425	C→T	7.8%	A27A (GCC→GCT)	hslU →	protease HslVU ATPase subunit
RA	5,699,431	C→T	7.6%	A29A (GCC→GCT)	hslU →	protease HslVU ATPase subunit
RA	5,699,440	C→T	7.5%	N32N (AAC→AAT)	hslU →	protease HslVU ATPase subunit
RA	5,699,449	G→T	7.4%	R35R (CGG→CGT)	hslU →	protease HslVU ATPase subunit
RA	5,699,452	C→T	7.4%	R36R (CGC→CGT)	hslU →	protease HslVU ATPase subunit
RA	5,699,453	A→C	7.5%	M37L (ATG→CTG) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,454	T→A	7.8%	M37K (ATG→AAG) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,461	C→G	7.2%	L39L (CTC→CTG)	hslU →	protease HslVU ATPase subunit
RA	5,699,462	C→G	7.5%	P40A (CCT→GCT) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,463	C→A	7.3%	P40H (CCT→CAT) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,464	T→A	7.2%	P40P (CCT→CCA) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,466	C→G	7.5%	A41G (GCC→GGC)	hslU →	protease HslVU ATPase subunit
RA	5,699,468	G→C	7.6%	E42Q (GAG→CAG)	hslU →	protease HslVU ATPase subunit
RA	5,699,471	C→A	7.8%	L43M (CTG→ATG)	hslU →	protease HslVU ATPase subunit
RA	5,699,476	T→C	7.7%	R44R (CGT→CGC)	hslU →	protease HslVU ATPase subunit
RA	5,699,478	C→A	7.5%	A45D (GCC→GAC) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,479	C→A	7.3%	A45A (GCC→GCA) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,482	A→G	7.7%	E46E (GAA→GAG)	hslU →	protease HslVU ATPase subunit
RA	5,699,487	C→T	7.7%	T48I (ACC→ATC) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,488	C→G	7.6%	T48T (ACC→ACG) ‡	hslU →	protease HslVU ATPase subunit
RA	5,699,491	C→A	7.6%	P49P (CCC→CCA)	hslU →	protease HslVU ATPase subunit
RA	5,699,500	C→T	7.4%	I52I (ATC→ATT)	hslU →	protease HslVU ATPase subunit
RA	5,699,512	C→A	7.0%	G56G (GGC→GGA)	hslU →	protease HslVU ATPase subunit
RA	5,699,515	T→G	7.1%	P57P (CCT→CCG)	hslU →	protease HslVU ATPase subunit
RA	5,699,524	C→T	6.7%	V60V (GTC→GTT)	hslU →	protease HslVU ATPase subunit
RA	5,726,259	T→A	12.3%	intergenic (‑183/+111)	PP_5024 ← / ← opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
RA	5,736,000	T→G	6.3%	intergenic (‑48/+109)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,737,921	G→A	5.7%	H501H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,737,924	C→T	5.9%	Q500Q (CAG→CAA)	hutU ←	urocanate hydratase
RA	5,737,927	C→G	6.0%	S499S (TCG→TCC)	hutU ←	urocanate hydratase
RA	5,737,942	C→G	5.4%	V494V (GTG→GTC)	hutU ←	urocanate hydratase
RA	5,737,948	A→G	5.6%	G492G (GGT→GGC)	hutU ←	urocanate hydratase
RA	5,737,951	G→A	5.2%	G491G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,737,957	G→A	5.9%	H489H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,737,960	C→G	5.9%	L488L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,737,972	G→T	5.5%	T484T (ACC→ACA)	hutU ←	urocanate hydratase
RA	5,737,975	G→C	5.5%	A483A (GCC→GCG)	hutU ←	urocanate hydratase
RA	5,737,978	G→A	5.8%	G482G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,737,982	C→G	6.5%	G481A (GGC→GCC) ‡	hutU ←	urocanate hydratase
RA	5,737,983	C→A	6.3%	G481C (GGC→TGC) ‡	hutU ←	urocanate hydratase
RA	5,737,993	C→G	6.8%	L477L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,737,998	G→A	6.2%	L476L (CTG→TTG)	hutU ←	urocanate hydratase
RA	5,737,999	G→C	5.8%	A475A (GCC→GCG)	hutU ←	urocanate hydratase
RA	5,738,002	G→A	6.2%	N474N (AAC→AAT)	hutU ←	urocanate hydratase
RA	5,738,023	A→G	5.7%	V467V (GTT→GTC)	hutU ←	urocanate hydratase
RA	5,738,026	A→T	5.0%	A466A (GCT→GCA)	hutU ←	urocanate hydratase
RA	5,738,899	C→A	7.7%	L175L (CTG→CTT)	hutU ←	urocanate hydratase
RA	5,738,906	G→C	10.0%	A173G (GCT→GGT)	hutU ←	urocanate hydratase
RA	5,738,911	G→C	10.1%	L171L (CTC→CTG)	hutU ←	urocanate hydratase
RA	5,738,914	T→A	9.9%	V170V (GTA→GTT) ‡	hutU ←	urocanate hydratase
RA	5,738,916	C→T	10.4%	V170I (GTA→ATA) ‡	hutU ←	urocanate hydratase
RA	5,738,920	C→T	10.1%	K168K (AAG→AAA)	hutU ←	urocanate hydratase
RA	5,738,926	T→C	11.1%	K166K (AAA→AAG)	hutU ←	urocanate hydratase
RA	5,738,929	C→G	10.9%	L165L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,738,933	C→T	14.1%	S164N (AGC→AAC)	hutU ←	urocanate hydratase
RA	5,738,939	C→T	14.8%	G162D (GGC→GAC)	hutU ←	urocanate hydratase
RA	5,738,941	G→A	14.8%	Y161Y (TAC→TAT)	hutU ←	urocanate hydratase
RA	5,738,944	G→A	14.6%	H160H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,738,962	G→C	17.9%	V154V (GTC→GTG)	hutU ←	urocanate hydratase
RA	5,738,986	G→A	22.1%	V146V (GTC→GTT)	hutU ←	urocanate hydratase
RA	5,738,989	G→A	22.3%	I145I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,738,998	G→T	20.6%	S142R (AGC→AGA) ‡	hutU ←	urocanate hydratase
RA	5,738,999	C→G	21.1%	S142T (AGC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,000	T→C	20.7%	S142G (AGC→GGC) ‡	hutU ←	urocanate hydratase
RA	5,739,001	G→A	20.7%	G141G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,739,010	G→A	23.4%	I138I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,739,016	G→C	23.5%	S136R (AGC→AGG) ‡	hutU ←	urocanate hydratase
RA	5,739,017	C→G	23.6%	S136T (AGC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,018	T→A	23.4%	S136C (AGC→TGC) ‡	hutU ←	urocanate hydratase
RA	5,739,019	G→A	23.5%	G135G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,739,043	C→G	22.5%	A127A (GCG→GCC)	hutU ←	urocanate hydratase
RA	5,739,046	C→G	20.1%	L126L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,049	G→A	19.7%	G125G (GGC→GGT)	hutU ←	urocanate hydratase
RA	5,739,055	G→C	19.4%	A123A (GCC→GCG) ‡	hutU ←	urocanate hydratase
RA	5,739,056	G→T	19.3%	A123D (GCC→GAC) ‡	hutU ←	urocanate hydratase
RA	5,739,057	C→T	19.3%	A123T (GCC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,058	G→A	19.4%	D122D (GAC→GAT)	hutU ←	urocanate hydratase
RA	5,739,064	T→C	19.3%	E120E (GAA→GAG)	hutU ←	urocanate hydratase
RA	5,739,073	G→A	16.7%	H117H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,739,076	T→A	16.6%	E116D (GAA→GAT)	hutU ←	urocanate hydratase
RA	5,739,083	T→G	15.2%	N114T (AAC→ACC)	hutU ←	urocanate hydratase
RA	5,739,085	G→C	15.2%	A113A (GCC→GCG)	hutU ←	urocanate hydratase
RA	5,739,091	G→A	13.6%	H111H (CAC→CAT)	hutU ←	urocanate hydratase
RA	5,739,094	T→C	13.7%	P110P (CCA→CCG)	hutU ←	urocanate hydratase
RA	5,739,100	C→G	13.0%	L108L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,103	G→A	13.2%	N107N (AAC→AAT)	hutU ←	urocanate hydratase
RA	5,739,109	G→A	12.1%	N105N (AAC→AAT)	hutU ←	urocanate hydratase
RA	5,739,115	A→G	11.5%	I103I (ATT→ATC)	hutU ←	urocanate hydratase
RA	5,739,118	C→G	10.3%	L102L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,121	C→A	10.7%	V101V (GTG→GTT)	hutU ←	urocanate hydratase
RA	5,739,133	G→A	9.6%	N97N (AAC→AAT) ‡	hutU ←	urocanate hydratase
RA	5,739,135	T→C	10.0%	N97D (AAC→GAC) ‡	hutU ←	urocanate hydratase
RA	5,739,136	G→C	9.7%	S96R (AGC→AGG) ‡	hutU ←	urocanate hydratase
RA	5,739,137	C→T	9.7%	S96N (AGC→AAC) ‡	hutU ←	urocanate hydratase
RA	5,739,145	C→G	8.7%	K93N (AAG→AAC) ‡	hutU ←	urocanate hydratase
RA	5,739,146	T→C	9.1%	K93R (AAG→AGG) ‡	hutU ←	urocanate hydratase
RA	5,739,147	T→G	8.7%	K93Q (AAG→CAG) ‡	hutU ←	urocanate hydratase
RA	5,739,154	A→G	8.8%	G90G (GGT→GGC)	hutU ←	urocanate hydratase
RA	5,739,157	G→C	9.1%	V89V (GTC→GTG)	hutU ←	urocanate hydratase
RA	5,739,183	G→A	7.3%	L81L (CTG→TTG)	hutU ←	urocanate hydratase
RA	5,739,193	G→T	7.2%	D77E (GAC→GAA)	hutU ←	urocanate hydratase
RA	5,739,196	T→A	6.8%	E76D (GAA→GAT) ‡	hutU ←	urocanate hydratase
RA	5,739,198	C→T	6.7%	E76K (GAA→AAA) ‡	hutU ←	urocanate hydratase
RA	5,739,199	C→G	6.7%	L75L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,202	G→C	6.7%	R74R (CGC→CGG) ‡	hutU ←	urocanate hydratase
RA	5,739,204	G→T	6.6%	R74S (CGC→AGC) ‡	hutU ←	urocanate hydratase
RA	5,739,205	G→C	6.5%	T73T (ACC→ACG) ‡	hutU ←	urocanate hydratase
RA	5,739,206	G→T	6.6%	T73N (ACC→AAC) ‡	hutU ←	urocanate hydratase
RA	5,739,208	C→G	6.7%	L72L (CTG→CTC)	hutU ←	urocanate hydratase
RA	5,739,214	T→C	6.4%	E70E (GAA→GAG) ‡	hutU ←	urocanate hydratase
RA	5,739,215	T→G	6.4%	E70A (GAA→GCA) ‡	hutU ←	urocanate hydratase
RA	5,739,220	G→A	6.5%	I68I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,739,230	T→A	6.3%	Y65F (TAC→TTC)	hutU ←	urocanate hydratase
RA	5,739,232	G→A	6.1%	C64C (TGC→TGT) ‡	hutU ←	urocanate hydratase
RA	5,739,233	C→T	6.1%	C64Y (TGC→TAC) ‡	hutU ←	urocanate hydratase
RA	5,739,234	A→C	6.0%	C64G (TGC→GGC) ‡	hutU ←	urocanate hydratase
RA	5,739,235	G→A	6.1%	A63A (GCC→GCT) ‡	hutU ←	urocanate hydratase
RA	5,739,236	G→T	6.3%	A63D (GCC→GAC) ‡	hutU ←	urocanate hydratase
RA	5,739,241	G→T	5.9%	N61K (AAC→AAA) ‡	hutU ←	urocanate hydratase
RA	5,739,242	T→G	5.9%	N61T (AAC→ACC) ‡	hutU ←	urocanate hydratase
RA	5,739,250	G→A	6.1%	A58A (GCC→GCT)	hutU ←	urocanate hydratase
RA	5,739,259	G→A	5.5%	I55I (ATC→ATT)	hutU ←	urocanate hydratase
RA	5,739,262	A→G	5.4%	G54G (GGT→GGC)	hutU ←	urocanate hydratase
RA	5,739,577	G→C	5.5%	intergenic (‑154/+48)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,739,580	G→C	5.8%	intergenic (‑157/+45)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,742,435	G→A	11.3%	intergenic (+22/+49)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,445	T→G	22.1%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,448	A→T	19.7%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,449	A→T	20.8%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,452	C→A	19.7%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,742,462	T→C	10.5%	intergenic (+49/+22)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,745,327	A→G	8.7%	intergenic (‑182/+65)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,328	C→T	8.6%	intergenic (‑183/+64)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,329	A→C	11.4%	intergenic (‑184/+63)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,330	G→T	9.0%	intergenic (‑185/+62)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,338	C→T	15.1%	intergenic (‑193/+54)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,340	T→C	14.7%	intergenic (‑195/+52)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,341	G→A	14.7%	intergenic (‑196/+51)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,343	A→G	15.5%	intergenic (‑198/+49)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,351	A→C	12.4%	intergenic (‑206/+41)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,352	G→T	11.2%	intergenic (‑207/+40)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,353	A→G	11.5%	intergenic (‑208/+39)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,745,354	C→T	8.9%	intergenic (‑209/+38)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,746,092	C→A	6.4%	W584L (TGG→TTG)	glgP ←	glycogen phosphorylase
RA	5,746,094	G→C	6.2%	N583K (AAC→AAG) ‡	glgP ←	glycogen phosphorylase
RA	5,746,096	T→G	6.6%	N583H (AAC→CAC) ‡	glgP ←	glycogen phosphorylase
RA	5,748,463	G→C	6.8%	intergenic (+32/+67)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,748,466	G→C	6.5%	intergenic (+35/+64)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,753,697	G→T	9.8%	intergenic (‑157/‑314)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,703	A→G	13.4%	intergenic (‑163/‑308)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,707	G→T	11.3%	intergenic (‑167/‑304)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,708	G→T	11.4%	intergenic (‑168/‑303)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,713	A→C	11.6%	intergenic (‑173/‑298)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,714	A→C	11.7%	intergenic (‑174/‑297)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,718	C→T	11.3%	intergenic (‑178/‑293)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,724	A→C	10.1%	intergenic (‑184/‑287)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,754,841	C→A	5.2%	D277E (GAC→GAA)	glnA →	glutamine synthetase
RA	5,754,848	A→C	5.4%	N280H (AAC→CAC) ‡	glnA →	glutamine synthetase
RA	5,754,849	A→C	5.5%	N280T (AAC→ACC) ‡	glnA →	glutamine synthetase
RA	5,754,850	C→A	5.5%	N280K (AAC→AAA) ‡	glnA →	glutamine synthetase
RA	5,754,857	T→G	5.6%	S283A (TCG→GCG) ‡	glnA →	glutamine synthetase
RA	5,754,859	G→T	5.6%	S283S (TCG→TCT) ‡	glnA →	glutamine synthetase
RA	5,754,863	G→A	5.7%	E285K (GAA→AAA) ‡	glnA →	glutamine synthetase
RA	5,754,865	A→C	5.9%	E285D (GAA→GAC) ‡	glnA →	glutamine synthetase
RA	5,754,867	G→A	6.0%	G286D (GGC→GAC) ‡	glnA →	glutamine synthetase
RA	5,754,868	C→A	6.1%	G286G (GGC→GGA) ‡	glnA →	glutamine synthetase
RA	5,754,883	C→G	9.6%	S291S (TCC→TCG)	glnA →	glutamine synthetase
RA	5,754,886	C→A	9.2%	D292E (GAC→GAA)	glnA →	glutamine synthetase
RA	5,754,888	C→A	9.4%	T293N (ACC→AAC)	glnA →	glutamine synthetase
RA	5,754,890	G→T	8.9%	A294S (GCC→TCC) ‡	glnA →	glutamine synthetase
RA	5,754,891	C→G	9.0%	A294G (GCC→GGC) ‡	glnA →	glutamine synthetase
RA	5,754,897	A→T	8.5%	Y296F (TAC→TTC)	glnA →	glutamine synthetase
RA	5,754,910	T→C	11.9%	G300G (GGT→GGC)	glnA →	glutamine synthetase
RA	5,754,911	A→G	12.3%	I301V (ATC→GTC)	glnA →	glutamine synthetase
RA	5,754,924	G→C	11.7%	G305A (GGT→GCT) ‡	glnA →	glutamine synthetase
RA	5,754,925	T→C	11.4%	G305G (GGT→GGC) ‡	glnA →	glutamine synthetase
RA	5,754,931	C→T	10.8%	A307A (GCC→GCT)	glnA →	glutamine synthetase
RA	5,754,932	C→G	11.6%	L308V (CTG→GTG)	glnA →	glutamine synthetase
RA	5,754,939	G→C	11.5%	G310A (GGC→GCC) ‡	glnA →	glutamine synthetase
RA	5,754,940	C→A	11.0%	G310G (GGC→GGA) ‡	glnA →	glutamine synthetase
RA	5,754,964	G→C	10.3%	S318S (TCG→TCC)	glnA →	glutamine synthetase
RA	5,754,967	C→T	9.9%	Y319Y (TAC→TAT)	glnA →	glutamine synthetase
RA	5,754,985	C→T	6.7%	G325G (GGC→GGT)	glnA →	glutamine synthetase
RA	5,754,987	T→A	6.7%	F326Y (TTC→TAC) ‡	glnA →	glutamine synthetase
RA	5,754,988	C→T	6.5%	F326F (TTC→TTT) ‡	glnA →	glutamine synthetase
RA	5,754,994	C→T	6.5%	A328A (GCC→GCT)	glnA →	glutamine synthetase
RA	5,755,000	A→T	6.4%	V330V (GTA→GTT)	glnA →	glutamine synthetase
RA	5,755,001	A→C	6.4%	M331L (ATG→CTG)	glnA →	glutamine synthetase
RA	5,761,474	G→A	5.3%	intergenic (+105/+51)	trmL → / ← secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
RA	5,761,476	C→A	5.2%	intergenic (+107/+49)	trmL → / ← secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
RA	5,792,121	A→T	7.0%	intergenic (+22/+46)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,128	A→G	6.9%	intergenic (+29/+39)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,129	C→G	6.9%	intergenic (+30/+38)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,130	C→T	6.8%	intergenic (+31/+37)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,792,137	A→T	7.1%	intergenic (+38/+30)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,800,176	T→C	5.1%	intergenic (‑299/+75)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,800,179	G→A	5.1%	intergenic (‑302/+72)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,809,962	A→G	11.4%	intergenic (+119/+36)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,809,963	T→C	11.4%	intergenic (+120/+35)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,809,964	G→A	11.4%	intergenic (+121/+34)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,809,965	C→T	11.5%	intergenic (+122/+33)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,818,821	C→T	10.5%	intergenic (+29/+100)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,818,831	A→G	11.5%	intergenic (+39/+90)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,826,370	G→C	5.5%	G48A (GGC→GCC)	PP_5102 →	hypothetical protein
RA	5,826,373	T→G	5.1%	L49R (CTC→CGC)	PP_5102 →	hypothetical protein
RA	5,826,376	C→A	5.4%	A50E (GCG→GAG)	PP_5102 →	hypothetical protein
RA	5,826,379	G→C	5.5%	G51A (GGC→GCC)	PP_5102 →	hypothetical protein
RA	5,847,573:1	+A	5.8%	intergenic (+20/‑82)	coaD → / → yfhL	phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein
RA	5,847,580	Δ1 bp	5.4%	intergenic (+27/‑75)	coaD → / → yfhL	phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein
RA	5,848,161	T→C	7.2%	T217A (ACC→GCC)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,848,168	G→A	6.9%	G214G (GGC→GGT)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,851,315	C→T	6.3%	N14N (AAC→AAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,321	C→T	7.0%	A16A (GCC→GCT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,327	C→G	7.8%	A18A (GCC→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,330	T→C	7.5%	R19R (CGT→CGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,332	C→G	8.0%	A20G (GCC→GGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,336	G→A	7.9%	L21L (CTG→CTA)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,351	G→C	8.7%	G26G (GGG→GGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,360	C→T	8.9%	D29D (GAC→GAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,363	A→G	9.3%	E30E (GAA→GAG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,366	C→T	9.0%	D31D (GAC→GAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,369	C→T	8.5%	F32F (TTC→TTT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,370	A→G	8.7%	K33E (AAG→GAG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,371	A→G	8.7%	K33R (AAG→AGG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,372	G→C	9.0%	K33N (AAG→AAC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,375	A→G	8.8%	K34K (AAA→AAG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,378	G→A	8.8%	P35P (CCG→CCA)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,381	C→T	9.8%	I36I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,384	C→T	9.9%	I37I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,387	C→T	9.4%	A38A (GCC→GCT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,388	A→G	9.4%	I39V (ATC→GTC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,390	C→G	9.4%	I39M (ATC→ATG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,392	C→T	9.4%	A40V (GCC→GTC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,393	C→G	9.4%	A40A (GCC→GCG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,414	A→G	13.2%	V47V (GTA→GTG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,429	C→T	10.8%	H52H (CAC→CAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,441	G→C	11.0%	L56L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,450	G→C	11.4%	L59L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,453	G→C	11.1%	V60V (GTG→GTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,456	T→G	10.6%	A61A (GCT→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,465	C→T	10.8%	I64I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,469	C→G	10.4%	R66G (CGC→GGC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,470	G→C	10.5%	R66P (CGC→CCC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,471	C→A	10.5%	R66R (CGC→CGA) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,474	C→T	10.9%	A67A (GCC→GCT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,477	T→C	10.9%	G68G (GGT→GGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,483	G→T	10.8%	V70V (GTG→GTT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,504	C→T	10.5%	I77I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,519	C→T	12.2%	G82G (GGC→GGT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,525	C→G	12.6%	A84A (GCC→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,534	C→T	12.0%	H87H (CAC→CAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,546	G→C	9.5%	L91L (CTG→CTC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,549	C→T	9.1%	Y92Y (TAC→TAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,559	A→T	8.6%	S96C (AGC→TGC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,560	G→C	8.7%	S96T (AGC→ACC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,561	C→G	8.8%	S96R (AGC→AGG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,567	A→G	9.1%	E98E (GAA→GAG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,568	A→C	8.8%	I99L (ATC→CTC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,570	C→G	8.8%	I99M (ATC→ATG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,574	G→T	9.8%	A101S (GCC→TCC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,580	G→T	9.1%	A103S (GCC→TCC) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,582	C→G	9.2%	A103A (GCC→GCG) ‡	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,585	G→T	9.4%	V104V (GTG→GTT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,591	C→T	9.2%	Y106Y (TAC→TAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,603	G→C	8.1%	A110A (GCG→GCC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,606	C→T	7.1%	H111H (CAC→CAT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,618	C→G	7.1%	A115A (GCC→GCG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,621	C→G	6.8%	I116M (ATC→ATG)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,627	T→C	6.4%	C118C (TGT→TGC)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,630	C→T	5.7%	I119I (ATC→ATT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,851,651	C→T	5.3%	T126T (ACC→ACT)	ilvD →	dihydroxy‑acid dehydratase
RA	5,868,674	G→T	7.6%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,868,675	A→C	7.5%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,878,974	C→A	10.1%	intergenic (+18/+87)	rpiA → / ← PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
RA	5,878,982	T→A	7.4%	intergenic (+26/+79)	rpiA → / ← PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
RA	5,878,998	G→C	8.9%	intergenic (+42/+63)	rpiA → / ← PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
RA	5,899,748	A→G	13.0%	intergenic (‑170/+64)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,751	G→A	12.8%	intergenic (‑173/+61)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,756	C→G	13.1%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,757	G→C	12.1%	intergenic (‑179/+55)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,760	G→C	13.5%	intergenic (‑182/+52)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,761	C→G	13.1%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,766	T→C	13.2%	intergenic (‑188/+46)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,899,769	C→T	12.0%	intergenic (‑191/+43)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,905,142	G→T	12.0%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,905,143	A→C	17.8%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,905,796	T→G	9.7%	intergenic (+74/+33)	PP_5176 → / ← spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
RA	5,905,809	G→A	9.4%	intergenic (+87/+20)	PP_5176 → / ← spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
RA	5,916,151	A→C	6.5%	intergenic (+65/+88)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,916,165	A→C	7.6%	intergenic (+79/+74)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,916,200	T→A	6.8%	intergenic (+114/+39)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,922,201	A→C	7.6%	Q270P (CAG→CCG)	PP_5190 →	type II secretion system protein
RA	5,926,526	T→A	10.0%	intergenic (‑118/+79)	gcvP‑II ← / ← gcvH‑II	glycine dehydrogenase/glycine cleavage system protein H
RA	5,926,542	G→C	7.7%	intergenic (‑134/+63)	gcvP‑II ← / ← gcvH‑II	glycine dehydrogenase/glycine cleavage system protein H
RA	5,945,606	T→A	8.9%	intergenic (+36/+49)	PP_5210 → / ← PP_5211	alcohol dehydrogenase/ChaC‑related protein
RA	5,950,660	T→A	5.6%	intergenic (‑63/+19)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,950,661	T→A	5.6%	intergenic (‑64/+18)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,967,549	A→C	5.3%	intergenic (+69/+31)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,967,551	C→T	5.3%	intergenic (+71/+29)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,967,552	G→C	5.2%	intergenic (+72/+28)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,967,553	A→G	5.3%	intergenic (+73/+27)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,967,555	G→T	5.5%	intergenic (+75/+25)	had → / ← PP_5232	(S)‑2‑haloacid dehalogenase/hypothetical protein
RA	5,970,399	T→G	8.8%	T51P (ACG→CCG)	PP_5723 ←	hypothetical protein
RA	5,970,415	A→C	8.0%	L45L (CTT→CTG)	PP_5723 ←	hypothetical protein
RA	5,970,426	A→C	6.5%	W42G (TGG→GGG)	PP_5723 ←	hypothetical protein
RA	5,971,708	G→A	8.8%	L522L (CTG→TTG)	PP_5236 ←	hypothetical protein
RA	5,971,711	T→A	8.0%	N521Y (AAC→TAC)	PP_5236 ←	hypothetical protein
RA	5,971,712	G→C	8.0%	Y520* (TAC→TAG) ‡	PP_5236 ←	hypothetical protein
RA	5,971,713	T→A	7.9%	Y520F (TAC→TTC) ‡	PP_5236 ←	hypothetical protein
RA	5,971,716	T→C	8.2%	K519R (AAG→AGG)	PP_5236 ←	hypothetical protein
RA	5,986,414	T→C	17.2%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,420	G→A	16.3%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,422	T→C	16.2%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,425	G→A	15.5%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,427	T→C	16.0%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,433	G→A	15.1%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,986,816	G→A	5.4%	N94N (AAC→AAT)	ycaC‑II ←	putative hydrolase
RA	5,986,843	A→G	5.5%	R85R (CGT→CGC)	ycaC‑II ←	putative hydrolase
RA	5,986,846	G→A	5.6%	A84A (GCC→GCT)	ycaC‑II ←	putative hydrolase
RA	5,986,849	A→G	5.5%	I83I (ATT→ATC)	ycaC‑II ←	putative hydrolase
RA	5,986,852	G→A	5.5%	Y82Y (TAC→TAT)	ycaC‑II ←	putative hydrolase
RA	5,986,855	C→A	5.5%	P81P (CCG→CCT)	ycaC‑II ←	putative hydrolase
RA	5,986,870	C→T	5.6%	M76I (ATG→ATA) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,871	A→G	5.6%	M76T (ATG→ACG) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,873	C→T	5.7%	E75E (GAG→GAA)	ycaC‑II ←	putative hydrolase
RA	5,986,885	G→C	5.5%	P71P (CCC→CCG)	ycaC‑II ←	putative hydrolase
RA	5,986,893	G→A	5.4%	L69L (CTG→TTG)	ycaC‑II ←	putative hydrolase
RA	5,986,894	C→T	5.4%	P68P (CCG→CCA)	ycaC‑II ←	putative hydrolase
RA	5,986,909	T→G	5.6%	Q63H (CAA→CAC) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,911	G→T	5.4%	Q63K (CAA→AAA) ‡	ycaC‑II ←	putative hydrolase
RA	5,986,912	C→T	5.7%	E62E (GAG→GAA)	ycaC‑II ←	putative hydrolase
RA	5,986,915	G→A	5.0%	F61F (TTC→TTT)	ycaC‑II ←	putative hydrolase
RA	5,986,918	G→A	5.4%	S60S (AGC→AGT)	ycaC‑II ←	putative hydrolase
RA	5,990,787	G→A	33.9%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,797	T→C	33.4%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,802	C→T	32.3%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,803	G→T	32.3%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,804	C→T	32.3%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,807	A→G	31.8%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,813	G→C	33.5%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,815	C→G	35.2%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,818	C→T	35.2%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,822	C→G	33.6%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,826	C→T	32.3%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,828	C→T	32.0%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,867	C→A	31.9%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,872	C→T	33.5%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,873	A→G	33.7%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,883	T→C	35.1%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,990,889	Δ1 bp	34.8%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,992,312	A→G	7.4%	I111I (ATT→ATC)	ycaC‑III ←	putative hydrolase
RA	5,992,317	T→G	8.4%	I110L (ATC→CTC)	ycaC‑III ←	putative hydrolase
RA	5,992,320	G→A	8.3%	L109L (CTG→TTG)	ycaC‑III ←	putative hydrolase
RA	5,992,336	C→G	9.0%	A103A (GCG→GCC)	ycaC‑III ←	putative hydrolase
RA	5,992,345	C→T	8.8%	A100A (GCG→GCA)	ycaC‑III ←	putative hydrolase
RA	5,992,357	A→T	8.7%	D96E (GAT→GAA)	ycaC‑III ←	putative hydrolase
RA	5,992,363	G→A	8.9%	N94N (AAC→AAT)	ycaC‑III ←	putative hydrolase
RA	5,992,387	A→G	8.5%	P86P (CCT→CCC)	ycaC‑III ←	putative hydrolase
RA	5,992,393	G→A	8.8%	A84A (GCC→GCT)	ycaC‑III ←	putative hydrolase
RA	5,992,396	A→G	9.1%	I83I (ATT→ATC)	ycaC‑III ←	putative hydrolase
RA	5,992,399	G→A	9.1%	Y82Y (TAC→TAT)	ycaC‑III ←	putative hydrolase
RA	5,992,402	C→A	8.9%	P81P (CCG→CCT)	ycaC‑III ←	putative hydrolase
RA	5,992,417	C→T	7.7%	L76L (CTG→CTA) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,418	A→G	7.8%	L76P (CTG→CCG) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,419	G→T	7.8%	L76M (CTG→ATG) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,420	G→T	7.8%	A75A (GCC→GCA) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,421	G→T	7.5%	A75D (GCC→GAC) ‡	ycaC‑III ←	putative hydrolase
RA	5,992,429	T→C	7.8%	E72E (GAA→GAG)	ycaC‑III ←	putative hydrolase
RA	5,992,440	G→A	6.1%	L69L (CTG→TTG)	ycaC‑III ←	putative hydrolase
RA	5,992,441	C→T	5.6%	P68P (CCG→CCA)	ycaC‑III ←	putative hydrolase
RA	5,992,447	G→A	5.3%	N66N (AAC→AAT)	ycaC‑III ←	putative hydrolase
RA	5,999,167:1	+G	17.6%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,999,172	Δ1 bp	16.7%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,000,710	A→T	6.3%	T138T (ACT→ACA)	ycaC‑IV ←	putative hydrolase
RA	6,000,716	C→G	6.3%	V136V (GTG→GTC)	ycaC‑IV ←	putative hydrolase
RA	6,000,719	G→A	6.1%	F135F (TTC→TTT)	ycaC‑IV ←	putative hydrolase
RA	6,000,722	C→G	6.0%	V134V (GTG→GTC)	ycaC‑IV ←	putative hydrolase
RA	6,000,725	G→A	6.0%	D133D (GAC→GAT)	ycaC‑IV ←	putative hydrolase
RA	6,000,731	C→A	6.3%	E131D (GAG→GAT) ‡	ycaC‑IV ←	putative hydrolase
RA	6,000,732	T→C	6.3%	E131G (GAG→GGG) ‡	ycaC‑IV ←	putative hydrolase
RA	6,000,734	T→G	6.3%	E130D (GAA→GAC) ‡	ycaC‑IV ←	putative hydrolase
RA	6,000,735	T→G	6.3%	E130A (GAA→GCA) ‡	ycaC‑IV ←	putative hydrolase
RA	6,000,740	C→G	5.9%	L128L (CTG→CTC) ‡	ycaC‑IV ←	putative hydrolase
RA	6,000,742	G→T	6.0%	L128M (CTG→ATG) ‡	ycaC‑IV ←	putative hydrolase
RA	6,000,743	G→A	6.2%	A127A (GCC→GCT)	ycaC‑IV ←	putative hydrolase
RA	6,000,746	C→G	5.8%	S126S (TCG→TCC)	ycaC‑IV ←	putative hydrolase
RA	6,000,751	G→A	5.7%	L125L (CTG→TTG)	ycaC‑IV ←	putative hydrolase
RA	6,000,752	G→T	5.7%	A124A (GCC→GCA)	ycaC‑IV ←	putative hydrolase
RA	6,000,764	T→C	5.5%	V120V (GTA→GTG)	ycaC‑IV ←	putative hydrolase
RA	6,000,770	C→G	5.9%	V118V (GTG→GTC)	ycaC‑IV ←	putative hydrolase
RA	6,000,776	A→G	5.6%	T116T (ACT→ACC)	ycaC‑IV ←	putative hydrolase
RA	6,000,785	G→A	5.7%	G113G (GGC→GGT)	ycaC‑IV ←	putative hydrolase
RA	6,000,788	G→T	5.7%	A112A (GCC→GCA)	ycaC‑IV ←	putative hydrolase
RA	6,000,796	T→G	5.8%	I110L (ATC→CTC)	ycaC‑IV ←	putative hydrolase
RA	6,000,799	G→A	5.7%	L109L (CTG→TTG)	ycaC‑IV ←	putative hydrolase
RA	6,000,800	T→C	5.9%	Q108Q (CAA→CAG)	ycaC‑IV ←	putative hydrolase
RA	6,000,812	A→G	5.6%	T104T (ACT→ACC)	ycaC‑IV ←	putative hydrolase
RA	6,004,302	A→C	5.9%	intergenic (‑24/+122)	amaA ← / ← amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,489	C→A	6.5%	V142V (GTG→GTT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,492	A→G	6.6%	G141G (GGT→GGC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,495	C→A	6.2%	L140L (CTG→CTT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,501	G→A	6.8%	H138H (CAC→CAT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,513	A→C	7.3%	R134R (CGT→CGG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,514	C→A	7.5%	R134L (CGT→CTT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,515	G→T	7.4%	R134S (CGT→AGT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,519	G→A	7.5%	H132H (CAC→CAT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,520	T→C	7.5%	H132R (CAC→CGC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,522	G→A	7.4%	H131H (CAC→CAT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,528	C→A	8.1%	P129P (CCG→CCT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,530	G→C	7.9%	P129A (CCG→GCG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,534	C→T	8.2%	E127E (GAG→GAA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,539	A→T	8.7%	S126T (TCC→ACC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,546	G→T	8.6%	T123T (ACC→ACA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,549	C→G	8.6%	L122L (CTG→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,558	C→A	10.3%	L119L (CTG→CTT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,564	G→A	10.9%	R117R (CGC→CGT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,573	G→A	12.5%	G114G (GGC→GGT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,579	G→T	13.6%	A112A (GCC→GCA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,585	G→A	15.0%	D110D (GAC→GAT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,609	C→T	13.2%	V102V (GTG→GTA)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,615	A→G	12.4%	G100G (GGT→GGC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,618	C→G	12.6%	L99L (CTG→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,628	T→G	9.4%	Q96P (CAG→CCG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,629	G→A	9.6%	Q96* (CAG→TAG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,630	G→A	9.6%	T95T (ACC→ACT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,633	G→A	9.7%	I94I (ATC→ATT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,642	G→A	10.2%	A91A (GCC→GCT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,650	T→G	9.9%	I89L (ATC→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,654	G→A	9.4%	V87V (GTC→GTT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,657	C→G	9.2%	L86L (CTG→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,660	C→A	7.9%	E85D (GAG→GAT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,661	T→C	8.0%	E85G (GAG→GGG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,662	C→G	8.0%	E85Q (GAG→CAG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,672	G→T	7.0%	A81A (GCC→GCA) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,673	G→T	7.0%	A81D (GCC→GAC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,679	T→G	6.6%	H79P (CAC→CCC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,680	G→A	7.0%	H79Y (CAC→TAC) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,681	C→A	6.6%	E78D (GAG→GAT) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,682	T→G	6.7%	E78A (GAG→GCG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,690	C→T	6.9%	V75V (GTG→GTA) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,691	A→T	6.7%	V75E (GTG→GAG) ‡	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,696	G→A	6.4%	G73G (GGC→GGT)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,005,701	A→G	6.1%	F72L (TTC→CTC)	amaB ←	L‑piperidine‑6‑carboxylate dehydrogenase
RA	6,006,965	T→G	6.3%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,972	G→C	10.7%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,975	A→T	10.4%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,978	G→C	9.8%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,985	C→A	6.9%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,011,117:1	+G	10.7%	intergenic (+36/+46)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,011,121	T→C	11.0%	intergenic (+40/+42)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,011,122	T→C	9.8%	intergenic (+41/+41)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,011,127	G→A	9.4%	intergenic (+46/+36)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,011,128	G→A	9.7%	intergenic (+47/+35)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,013,719	C→T	5.1%	P198L (CCC→CTC)	rep →	single‑stranded DNA dependent ATPase
RA	6,013,722	A→G	5.2%	E199G (GAG→GGG)	rep →	single‑stranded DNA dependent ATPase
RA	6,015,814	G→A	20.6%	intergenic (+41/+69)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,816	A→G	22.3%	intergenic (+43/+67)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,823	G→C	20.3%	intergenic (+50/+60)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,824	T→G	23.3%	intergenic (+51/+59)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,825	C→T	21.4%	intergenic (+52/+58)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,830	A→G	20.2%	intergenic (+57/+53)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,831	C→A	20.7%	intergenic (+58/+52)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,832	G→C	21.8%	intergenic (+59/+51)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,839	C→T	21.2%	intergenic (+66/+44)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,015,841	T→C	21.3%	intergenic (+68/+42)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,021,257	A→C	5.4%	intergenic (‑80/+65)	dadX ← / ← dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
RA	6,023,678	T→G	7.3%	intergenic (‑51/‑93)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,023,679	C→A	7.4%	intergenic (‑52/‑92)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,025,137	G→A	7.1%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,025,138	T→C	7.1%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,034,763	C→T	6.8%	intergenic (+49/+87)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,034,766	Δ1 bp	6.5%	intergenic (+52/+84)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,034,767	C→A	7.0%	intergenic (+53/+83)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,034,771	G→C	7.4%	intergenic (+57/+79)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,034,773:1	+G	6.5%	intergenic (+59/+77)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,034,775	T→C	6.7%	intergenic (+61/+75)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,034,778	A→G	7.0%	intergenic (+64/+72)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,062,423	T→G	8.3%	intergenic (+81/+100)	PP_5311 → / ← PP_5312	signal transduction protein/hypothetical protein
RA	6,082,966	T→A	13.8%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,082,967	T→A	13.3%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,094,120	A→C	10.4%	E189D (GAA→GAC)	PP_5343 →	putative Transcriptional regulator
RA	6,113,955	T→A	6.6%	H118Q (CAT→CAA)	PP_5362 →	hypothetical protein
RA	6,128,925	T→A	6.7%	intergenic (+38/+29)	PP_5374 → / ← PP_5375	choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator
RA	6,160,959	C→T	5.8%	intergenic (+318/+550)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,961	C→G	5.8%	intergenic (+320/+548)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,962	T→A	5.8%	intergenic (+321/+547)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,963	C→G	5.7%	intergenic (+322/+546)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,160,965	A→G	5.7%	intergenic (+324/+544)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,168,449	T→G	5.2%	intergenic (‑230/‑450)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,168,452	C→A	5.1%	intergenic (‑233/‑447)	PP_5406 ← / → PP_5407	transposase/TnsD‑like transposition protein
RA	6,176,687	A→C	5.1%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	6183852	6183858	7	331 [0]	[0] NA	atpI/–	ATP synthase protein I/–

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1 =	0 (0.000)	309 (1.120)	136/276	NT	100%	intergenic (–/+146)	–/parB	–/chromosome‑partitioning protein
	?	NC_002947	= 6183851	0 (0.000)					intergenic (‑3/–)	atpI/–	ATP synthase protein I/–
*	?	NC_002947	86750 =	166 (0.600)	15 (0.060)	10/244	NT	8.8%	intergenic (‑33/+112)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	86841 =	165 (0.680)					intergenic (‑124/+21)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	= 86765	163 (0.590)	11 (0.050)	6/244	NT	6.6%	intergenic (‑48/+97)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	= 86824	165 (0.680)					intergenic (‑107/+38)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	90359 =	190 (0.690)	16 (0.070)	10/244	NT	9.0%	intergenic (+34/+88)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	90414 =	156 (0.640)					intergenic (+89/+33)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	= 90374	179 (0.650)	32 (0.130)	14/244	NT	16.9%	intergenic (+49/+73)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	= 90397	156 (0.640)					intergenic (+72/+50)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	100443 =	195 (0.710)	11 (0.050)	7/242	NT	5.4%	intergenic (‑35/+87)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
	?	NC_002947	100525 =	218 (0.900)					intergenic (‑117/+5)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
*	?	NC_002947	= 171806	NA (NA)	197 (0.900) +28 bp	46/220	NT	NA	noncoding (418/1522 nt)	PP_16SA	16S ribosomal RNA
	?	NC_002947	171860 =	NA (NA)					noncoding (472/1522 nt)	PP_16SA	16S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	81 (0.310) +CGAAA	15/266	NT	26.9%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	228 (0.830)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	209888 =	NA (NA)	10 (0.040)	4/272	NT	100%	coding (15394/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	209911 =	0 (0.000)					coding (15417/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 251781	247 (0.900)	13 (0.050)	8/262	NT	5.3%	intergenic (+22/‑40)	PP_0201/PP_5432	hypothetical protein/hypothetical protein
	?	NC_002947	= 251799	234 (0.900)					intergenic (+40/‑22)	PP_0201/PP_5432	hypothetical protein/hypothetical protein
*	?	NC_002947	295685 =	208 (0.760)	29 (0.110)	14/258	NT	13.1%	intergenic (+32/+110)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	295774 =	192 (0.750)					intergenic (+121/+21)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 295698	194 (0.700)	24 (0.090)	10/268	NT	11.0%	intergenic (+45/+97)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	= 295759	202 (0.760)					intergenic (+106/+36)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 312716	251 (0.910)	15 (0.050)	9/274	NT	6.4%	coding (498/831 nt)	fdhD	protein sulfur transferase
	?	NC_002947	= 312774	187 (0.680)					coding (440/831 nt)	fdhD	protein sulfur transferase
*	?	NC_002947	356668 =	307 (1.110)	15 (0.080) +48 bp	6/180	NT	8.7%	coding (10/1377 nt)	tdcG‑I	L‑serine dehydratase
	?	NC_002947	= 1126662	176 (0.640)					intergenic (‑111/+39)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 380858	76 (0.280)	18 (0.080)	9/230	NT	18.8%	intergenic (+45/+64)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	= 380892	92 (0.400)					intergenic (+79/+30)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	478264 =	84 (0.300)	15 (0.070)	5/216	NT	16.0%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	92 (0.430)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 478293	91 (0.330)	12 (0.060)	8/216	NT	12.8%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478328	92 (0.430)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 507040	255 (0.930)	24 (0.100)	13/250	NT	8.8%	intergenic (+49/+84)	trpE/estP	anthranilate synthase component 1/esterase EstP
	?	NC_002947	= 507074	269 (1.080)					intergenic (+83/+50)	trpE/estP	anthranilate synthase component 1/esterase EstP
*	?	NC_002947	= 668084	124 (0.450)	12 (0.050)	6/228	NT	9.0%	intergenic (+45/+107)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	= 668153	141 (0.620)					intergenic (+114/+38)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	706865 =	263 (0.950)	15 (0.060)	7/244	NT	6.8%	intergenic (+38/+208)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
	?	NC_002947	706982 =	180 (0.740)					intergenic (+155/+91)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
*	?	NC_002947	726899 =	184 (0.670)	22 (0.090)	8/248	NT	11.3%	intergenic (‑143/+124)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	726986 =	180 (0.730)					intergenic (‑230/+37)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 741872	NA (NA)	7 (0.030)	4/264	NT	NA	intergenic (+469/‑31)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741905	NA (NA)					coding (3/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 742614	NA (NA)	10 (0.040)	5/266	NT	NA	coding (712/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 1426852	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	742918 =	NA (NA)	24 (0.090)	9/264	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742948 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	786595 =	231 (0.840)	14 (0.060)	10/254	NT	6.4%	intergenic (+14/‑291)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	786703 =	194 (0.770)					intergenic (+122/‑183)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
*	?	NC_002947	= 796843	173 (0.630)	18 (0.070)	12/244	NT	9.6%	intergenic (+42/‑148)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
	?	NC_002947	= 796881	187 (0.770)					intergenic (+80/‑110)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
*	?	NC_002947	863166 =	317 (1.150)	15 (0.060)	8/256	NT	5.2%	coding (297/1017 nt)	hemH	ferrochelatase
	?	NC_002947	863207 =	253 (0.990)					coding (338/1017 nt)	hemH	ferrochelatase
*	?	NC_002947	867923 =	174 (0.630)	30 (0.120)	10/250	NT	15.5%	intergenic (+18/+159)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	868013 =	169 (0.680)					intergenic (+108/+69)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	= 915054	260 (0.940)	8 (0.040) +38 bp	5/200	NT	5.1%	intergenic (+19/+129)	fruA/PP_0796	PTS fructose transporter subunit IIBC/hypothetical protein
	?	NC_002947	= 1947891	155 (0.560)					intergenic (‑109/+61)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	1025270 =	108 (0.390)	16 (0.070)	7/222	NT	14.5%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	102 (0.460)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 1025296	113 (0.410)	13 (0.060)	6/222	NT	11.9%	intergenic (‑147/+82)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	= 1025335	102 (0.460)					intergenic (‑186/+43)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1037774 =	136 (0.490)	11 (0.050)	8/230	NT	8.3%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	129 (0.560)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1037796	138 (0.500)	19 (0.080)	11/230	NT	13.5%	intergenic (+38/+78)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	= 1037828	129 (0.560)					intergenic (+70/+46)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	1114875 =	96 (0.350)	19 (0.080)	17/226	NT	17.8%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114951 =	97 (0.430)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	= 1114899	99 (0.360)	22 (0.100)	13/226	NT	19.8%	intergenic (‑88/+91)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	= 1114925	97 (0.430)					intergenic (‑114/+65)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1138537 =	221 (0.800)	16 (0.060)	8/248	NT	7.9%	intergenic (‑62/+103)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
	?	NC_002947	1138626 =	176 (0.710)					intergenic (‑151/+14)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
*	?	NC_002947	= 1149932	189 (0.690)	24 (0.090)	7/260	NT	12.9%	intergenic (‑173/+84)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 1149995	147 (0.570)					intergenic (‑236/+21)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	1149934 =	186 (0.680)	17 (0.070)	11/252	NT	9.8%	intergenic (‑175/+82)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	1149995 =	142 (0.570)					intergenic (‑236/+21)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	1156328 =	131 (0.480)	34 (0.150)	16/226	NT	31.8%	intergenic (+25/‑191)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
	?	NC_002947	1156401 =	39 (0.170)					intergenic (+98/‑118)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
*	?	NC_002947	1170762 =	214 (0.780)	13 (0.050)	10/250	NT	6.3%	intergenic (‑347/+86)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
	?	NC_002947	1170822 =	196 (0.790)					intergenic (‑407/+26)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
*	?	NC_002947	1273256 =	214 (0.780)	15 (0.060)	11/246	NT	7.2%	intergenic (+41/+127)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	1273345 =	199 (0.810)					intergenic (+130/+38)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
*	?	NC_002947	= 1405723	257 (0.930)	23 (0.090)	13/254	NT	8.6%	intergenic (‑36/+31)	PP_1228/puuP	methyl‑accepting chemotaxis transducer/putrescine permease
	?	NC_002947	= 1405729	250 (0.990)					intergenic (‑42/+25)	PP_1228/puuP	methyl‑accepting chemotaxis transducer/putrescine permease
*	?	NC_002947	1419553 =	79 (0.290)	24 (0.110)	10/212	NT	26.4%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	73 (0.350)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	82 (0.300)	17 (0.080)	13/212	NT	20.0%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	73 (0.350)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	1426807 =	NA (NA)	7 (0.030)	6/270	NT	NA	coding (698/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	1426867 =	NA (NA)					coding (758/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1426821	NA (NA)	44 (0.170)	9/266	NT	NA	coding (712/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426852	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1444636	363 (1.320)	19 (0.070)	9/274	NT	5.0%	coding (253/1530 nt)	PP_1263	fusaric acid resistance protein
	?	NC_002947	= 1444681	356 (1.300)					coding (298/1530 nt)	PP_1263	fusaric acid resistance protein
*	?	NC_002947	1487013 =	66 (0.240)	33 (0.150)	13/216	NT	37.4%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	59 (0.270)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	64 (0.230)	21 (0.100)	12/216	NT	27.8%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	59 (0.270)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	1499443 =	81 (0.290)	15 (0.070)	8/230	NT	19.6%	intergenic (+13/‑153)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	1499526 =	56 (0.240)					intergenic (+96/‑70)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 1499465	83 (0.300)	12 (0.050)	5/230	NT	16.1%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	56 (0.240)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1531788 =	100 (0.360)	14 (0.060)	7/228	NT	13.6%	coding (130/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	1531884 =	95 (0.420)					coding (34/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	= 1531811	101 (0.370)	17 (0.070)	7/228	NT	16.0%	coding (107/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	= 1531859	95 (0.420)					coding (59/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	1731205 =	69 (0.250)	10 (0.050)	7/220	NT	13.7%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	71 (0.320)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1731232	75 (0.270)	11 (0.050)	4/220	NT	14.4%	intergenic (‑103/+88)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731268	71 (0.320)					intergenic (‑139/+52)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1799915	171 (0.620)	13 (0.060)	9/230	NT	8.0%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	158 (0.690)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	= 1821027	0 (0.000)	10 (0.040)	4/266	NT	100%	coding (748/1422 nt)	PP_1624	group II intron‑encoding maturase
	?	NC_002947	= 2072298	NA (NA)					coding (707/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	= 1821774	NA (NA)	10 (0.060) +53 bp	3/170	NT	8.1%	intergenic (+73/‑293)	PP_1624/PP_mr22	group II intron‑encoding maturase/PrrB_RsmZ ncRNA
	?	NC_002947	= 2073176	184 (0.670)					intergenic (+163/+64)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
*	?	NC_002947	= 1821774	NA (NA)	38 (0.190) +40 bp	8/196	NT	22.9%	intergenic (+73/‑293)	PP_1624/PP_mr22	group II intron‑encoding maturase/PrrB_RsmZ ncRNA
	?	NC_002947	= 2073199	181 (0.660)					intergenic (+186/+41)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
*	?	NC_002947	= 1838122	185 (0.670)	16 (0.060)	10/256	NT	7.2%	intergenic (+27/+77)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	= 1838184	240 (0.940)					intergenic (+89/+15)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	1899249 =	176 (0.640)	31 (0.120)	11/256	NT	14.2%	intergenic (+277/‑243)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899331 =	211 (0.830)					intergenic (+359/‑161)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1906724 =	162 (0.590)	16 (0.070)	5/224	NT	12.5%	intergenic (+22/+106)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1906818 =	92 (0.410)					intergenic (+116/+12)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	= 1925768	116 (0.420)	10 (0.040)	7/228	NT	8.2%	intergenic (‑25/+75)	PP_1725/PP_1726	hypothetical protein/ABC transporter substrate‑binding protein
	?	NC_002947	= 1925785	128 (0.560)					intergenic (‑42/+58)	PP_1725/PP_1726	hypothetical protein/ABC transporter substrate‑binding protein
*	?	NC_002947	1967188 =	56 (0.200)	17 (0.080)	8/210	NT	25.7%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	56 (0.270)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	52 (0.190)	23 (0.110)	11/210	NT	32.5%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	56 (0.270)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	1968074 =	192 (0.700)	16 (0.060)	9/250	NT	7.6%	intergenic (‑42/+116)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	1968159 =	215 (0.860)					intergenic (‑127/+31)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
*	?	NC_002947	1970763 =	213 (0.770)	23 (0.100)	13/236	NT	10.9%	intergenic (+14/‑252)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	1970865 =	195 (0.830)					intergenic (+116/‑150)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	= 1970795	184 (0.670)	22 (0.080)	9/266	NT	10.0%	intergenic (+46/‑220)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	= 1970831	218 (0.820)					intergenic (+82/‑184)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	2050759 =	180 (0.650)	27 (0.110)	12/242	NT	15.4%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2050850 =	139 (0.580)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	2052524 =	62 (0.230)	17 (0.080)	6/202	NT	28.3%	intergenic (‑52/+123)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	2052634 =	41 (0.200)					intergenic (‑162/+13)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2052560	57 (0.210)	19 (0.090)	6/202	NT	31.5%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2052596	41 (0.200)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2057943	161 (0.580)	9 (0.040)	7/244	NT	6.4%	intergenic (+27/‑116)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	= 2058017	119 (0.490)					intergenic (+101/‑42)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	= 2059763	162 (0.590)	20 (0.070)	7/268	NT	13.5%	intergenic (+14/+114)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2059853	99 (0.370)					intergenic (+104/+24)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	2059765 =	165 (0.600)	23 (0.100)	5/228	NT	16.7%	intergenic (+16/+112)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	2059853 =	93 (0.410)					intergenic (+104/+24)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	2061548 =	253 (0.920)	12 (0.050)	6/258	NT	5.1%	intergenic (+17/+107)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter
	?	NC_002947	2061629 =	210 (0.820)					intergenic (+98/+26)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter
*	?	NC_002947	= 2075427	177 (0.640)	9 (0.040)	4/246	NT	5.1%	intergenic (‑55/+146)	PP_1847/PP_1849	TonB‑dependent ferric siderophore receptor/hypothetical protein
	?	NC_002947	= 2075477	180 (0.730)					intergenic (‑105/+96)	PP_1847/PP_1849	TonB‑dependent ferric siderophore receptor/hypothetical protein
*	?	NC_002947	2080205 =	191 (0.690)	15 (0.060)	11/242	NT	9.2%	intergenic (+25/+90)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	2080286 =	130 (0.540)					intergenic (+106/+9)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	2087393 =	181 (0.660)	10 (0.040)	3/260	NT	5.5%	intergenic (+137/‑458)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	2089731 =	171 (0.660)					intergenic (+579/+339)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
*	?	NC_002947	= 2088408	NA (NA)	33 (0.120)	17/276	NT	NA	coding (558/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2088436	NA (NA)					coding (586/1302 nt)	PP_1865	transposase
*	?	NC_002947	2101925 =	76 (0.280)	19 (0.080)	9/230	NT	20.3%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2102020 =	86 (0.380)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2101947	72 (0.260)	24 (0.100)	9/230	NT	24.8%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2101996	86 (0.380)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2179666 =	284 (1.030)	107 (0.390)	71/274	NT	31.1%	intergenic (+102/‑64)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
	?	NC_002947	= 4459541	193 (0.710)					coding (213/696 nt)	pcaI	3‑oxoadipate CoA‑transferase subunit A
*	?	NC_002947	= 2181342	288 (1.050)	128 (0.470)	77/274	NT	34.8%	intergenic (+176/+92)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
	?	NC_002947	4459540 =	193 (0.710)					coding (212/696 nt)	pcaI	3‑oxoadipate CoA‑transferase subunit A
*	?	NC_002947	= 2260024	NA (NA)	10 (0.040)	4/260	NT	6.9%	intergenic (+114/‑278)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2260117	143 (0.520)					intergenic (+207/‑185)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	= 2260037	NA (NA)	14 (0.050)	7/268	NT	NA	intergenic (+127/‑265)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2260081	NA (NA)					intergenic (+171/‑221)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	2273163 =	148 (0.540)	17 (0.070)	12/244	NT	11.2%	intergenic (+19/‑201)	PP_2002/PP_t31	oxidoreductase/tRNA‑Val
	?	NC_002947	2273245 =	140 (0.580)					intergenic (+101/‑119)	PP_2002/PP_t31	oxidoreductase/tRNA‑Val
*	?	NC_002947	2297734 =	205 (0.740)	30 (0.110)	7/266	NT	13.2%	intergenic (+15/+118)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2297831 =	197 (0.740)					intergenic (+112/+21)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2414814 =	183 (0.660)	19 (0.070)	6/260	NT	9.4%	intergenic (+113/‑308)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
	?	NC_002947	2414907 =	194 (0.750)					intergenic (+206/‑215)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
*	?	NC_002947	2532746 =	84 (0.300)	24 (0.090)	9/272	NT	22.5%	coding (20/369 nt)	PP_2219	hypothetical protein
	?	NC_002947	= 4910049	NA (NA)					intergenic (‑58/‑224)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	2579078 =	232 (0.840)	13 (0.050)	9/276	NT	5.4%	coding (1282/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	2579150 =	226 (0.820)					coding (1210/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	2834638 =	256 (0.930)	12 (0.050)	10/262	NT	5.1%	intergenic (‑21/+46)	PP_2485/PP_2486	hypothetical protein/Oye family NADH‑dependent flavin oxidoreductase
	?	NC_002947	2834686 =	205 (0.780)					coding (1123/1125 nt)	PP_2486	Oye family NADH‑dependent flavin oxidoreductase
*	?	NC_002947	2956597 =	210 (0.760)	25 (0.110)	13/228	NT	15.6%	intergenic (‑135/‑146)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
	?	NC_002947	2956663 =	98 (0.430)					intergenic (‑201/‑80)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
*	?	NC_002947	3321099 =	181 (0.660)	13 (0.050)	9/246	NT	8.5%	intergenic (‑98/+94)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
	?	NC_002947	3321158 =	119 (0.490)					intergenic (‑157/+35)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
*	?	NC_002947	3341082 =	217 (0.790)	11 (0.050)	5/232	NT	6.8%	intergenic (‑119/+124)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	3341170 =	121 (0.520)					intergenic (‑207/+36)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
*	?	NC_002947	3368518 =	233 (0.850)	118 (0.430)	70/272	NT	31.7%	intergenic (+219/‑142)	PP_2962/PP_2964	alcohol dehydrogenase/transposase
	?	NC_002947	3734382 =	278 (1.020)					coding (824/1464 nt)	PP_3299	lipoprotein
*	?	NC_002947	= 3385530	201 (0.730)	97 (0.350)	58/274	NT	28.0%	coding (501/546 nt)	PP_2985	hypothetical protein
	?	NC_002947	= 3925187	300 (1.100)					coding (161/324 nt)	peaC	quinohemoprotein amine dehydrogenase subunit gamma
*	?	NC_002947	3590062 =	171 (0.620)	11 (0.050)	8/236	NT	8.5%	intergenic (+18/‑57)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	3590130 =	91 (0.390)					coding (12/1272 nt)	benE‑II	benzoate transport protein
*	?	NC_002947	= 3597839	NA (NA)	27 (0.100)	13/272	NT	8.2%	intergenic (‑432/+34)	PP_3172/nemA	group II intron‑encoding maturase/FMN‑linked N‑ethylmaleimide reductase
	?	NC_002947	= 4395435	308 (1.120)					intergenic (‑455/+15)	PP_3868/PP_3869	group II intron‑encoding maturase/sheath protein
*	?	NC_002947	3930305 =	154 (0.560)	14 (0.060)	11/242	NT	10.8%	intergenic (+15/‑125)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
	?	NC_002947	3930386 =	96 (0.400)					intergenic (+96/‑44)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
*	?	NC_002947	= 3949906	129 (0.470)	9 (0.040)	8/220	NT	7.1%	coding (109/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	= 3949935	134 (0.610)					coding (80/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3953063	106 (0.380)	18 (0.080)	12/220	NT	16.7%	intergenic (‑61/+134)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 3953123	95 (0.430)					intergenic (‑121/+74)	PP_3486/PP_3487	cytochrome c/hypothetical protein
*	?	NC_002947	4081380 =	121 (0.440)	13 (0.060)	8/228	NT	10.0%	intergenic (‑218/+166)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
	?	NC_002947	4081497 =	135 (0.590)					intergenic (‑335/+49)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
*	?	NC_002947	= 4096615	204 (0.740)	25 (0.100)	13/252	NT	10.8%	intergenic (+65/+70)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	= 4096660	225 (0.900)					intergenic (+110/+25)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
*	?	NC_002947	4161035 =	128 (0.460)	21 (0.080)	11/250	NT	12.7%	intergenic (+17/‑192)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4161123 =	173 (0.690)					intergenic (+105/‑104)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	= 4161064	150 (0.540)	17 (0.070)	10/244	NT	10.5%	intergenic (+46/‑163)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	= 4161092	157 (0.650)					intergenic (+74/‑135)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	4350400 =	NA (NA)	7 (0.030)	4/266	NT	NA	coding (202/1422 nt)	PP_3820	group II intron‑encoding maturase
	?	NC_002947	4394823 =	NA (NA)					coding (158/1422 nt)	PP_3868	group II intron‑encoding maturase
*	?	NC_002947	4352095 =	175 (0.640)	9 (0.040)	6/242	NT	6.4%	intergenic (‑181/+56)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
	?	NC_002947	4352146 =	111 (0.460)					intergenic (‑232/+5)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
*	?	NC_002947	= 4535545	166 (0.600)	12 (0.050)	6/252	NT	7.5%	intergenic (+21/‑153)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	= 4535610	143 (0.570)					intergenic (+86/‑88)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
*	?	NC_002947	= 4553939	90 (0.330)	21 (0.100)	10/210	NT	23.2%	intergenic (+67/+114)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
	?	NC_002947	= 4553990	71 (0.340)					intergenic (+118/+63)	pydA/rutR	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA/transcriptional regulator, TetR family
*	?	NC_002947	= 4585460	143 (0.520)	22 (0.090)	9/236	NT	17.4%	intergenic (‑67/+104)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4585521	87 (0.370)					intergenic (‑128/+43)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	4587985 =	25 (0.090)	32 (0.160)	18/200	NT	62.1%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4588089 =	21 (0.110)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4588022	21 (0.080)	55 (0.280)	24/200	NT	75.3%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4588050	21 (0.110)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	4589945 =	293 (1.060)	14 (0.050)	8/264	NT	5.1%	intergenic (‑163/‑159)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
	?	NC_002947	4590048 =	237 (0.900)					intergenic (‑266/‑56)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
*	?	NC_002947	4649525 =	31 (0.110)	26 (0.130)	10/198	NT	45.1%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4649633 =	41 (0.210)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4649563	33 (0.120)	24 (0.120)	10/198	NT	42.6%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4649593	41 (0.210)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	4810141 =	0 (0.000)	108 (0.530)	40/206	NT	60.2%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5990913	143 (0.700)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4810146	0 (0.000)	142 (0.570)	47/252	NT	60.0%	intergenic (‑288/‑267)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	5990743 =	189 (0.750)					intergenic (+59/‑487)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4847095 =	176 (0.640)	13 (0.050)	6/244	NT	8.6%	intergenic (+14/‑123)	PP_4260/PP_4261	hypothetical protein/cation‑transporting P‑type ATPase
	?	NC_002947	4847188 =	120 (0.490)					intergenic (+107/‑30)	PP_4260/PP_4261	hypothetical protein/cation‑transporting P‑type ATPase
*	?	NC_002947	4858063 =	199 (0.720)	13 (0.050)	9/248	NT	6.5%	intergenic (+68/+128)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	4858150 =	193 (0.780)					intergenic (+155/+41)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4858076	196 (0.710)	14 (0.060)	11/248	NT	7.1%	intergenic (+81/+115)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	= 4858135	193 (0.780)					intergenic (+140/+56)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	4888103 =	158 (0.570)	11 (0.050)	7/218	NT	10.1%	intergenic (+15/+108)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	4888190 =	72 (0.330)					intergenic (+102/+21)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 4891562	102 (0.370)	7 (0.030)	7/222	NT	6.7%	intergenic (+41/‑112)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	= 4891599	112 (0.510)					intergenic (+78/‑75)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	= 4895546	127 (0.460)	21 (0.090)	10/222	NT	16.0%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4895571	119 (0.540)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4898345 =	112 (0.410)	43 (0.180)	19/234	NT	30.1%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4898434 =	105 (0.450)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4898365	110 (0.400)	35 (0.150)	18/234	NT	26.1%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4898412	105 (0.450)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	4904811 =	144 (0.520)	8 (0.030)	6/268	NT	5.4%	intergenic (+30/+89)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit
	?	NC_002947	4904845 =	140 (0.520)					intergenic (+64/+55)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit
*	?	NC_002947	5127047 =	149 (0.540)	12 (0.050)	8/258	NT	7.7%	intergenic (+51/‑131)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
	?	NC_002947	5127146 =	148 (0.580)					intergenic (+150/‑32)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
*	?	NC_002947	5164540 =	105 (0.380)	26 (0.120)	13/224	NT	26.9%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5164624 =	56 (0.250)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5207159	252 (0.910)	14 (0.060)	8/246	NT	5.7%	intergenic (+80/+35)	PP_4585/PP_4586	TrmH family RNA methyltransferase/hypothetical protein
	?	NC_002947	= 5207173	241 (0.980)					intergenic (+94/+21)	PP_4585/PP_4586	TrmH family RNA methyltransferase/hypothetical protein
*	?	NC_002947	5212189 =	195 (0.710)	16 (0.070)	12/244	NT	8.9%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5212280 =	155 (0.640)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	5270871 =	276 (1.000)	16 (0.060)	10/274	NT	5.7%	coding (1487/1518 nt)	PP_4643	xanthine/uracil permease family protein
	?	NC_002947	5270906 =	257 (0.940)					intergenic (+4/+32)	PP_4643/radA	xanthine/uracil permease family protein/DNA repair enzyme
*	?	NC_002947	5275970 =	212 (0.770)	14 (0.060)	7/250	NT	8.1%	intergenic (+22/+84)	rlmG/PP_4649	ribosomal RNA large subunit methyltransferase G/hypothetical protein
	?	NC_002947	5276043 =	124 (0.500)					intergenic (+95/+11)	rlmG/PP_4649	ribosomal RNA large subunit methyltransferase G/hypothetical protein
*	?	NC_002947	5290364 =	82 (0.300)	13 (0.060)	4/216	NT	13.1%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5290458 =	109 (0.510)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	= 5290393	77 (0.280)	11 (0.050)	7/216	NT	11.5%	intergenic (‑104/+80)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	= 5290427	109 (0.510)					intergenic (‑138/+46)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	5335165 =	229 (0.830)	20 (0.080)	11/246	NT	10.2%	intergenic (+27/‑216)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
	?	NC_002947	5335225 =	148 (0.600)					intergenic (+87/‑156)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
*	?	NC_002947	5384368 =	61 (0.220)	14 (0.070)	6/206	NT	23.6%	intergenic (+18/+115)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	5384466 =	45 (0.220)					intergenic (+116/+17)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	= 5384402	47 (0.170)	17 (0.080)	11/206	NT	29.8%	intergenic (+52/+81)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	= 5384430	45 (0.220)					intergenic (+80/+53)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	= 5423135	229 (0.830)	14 (0.050)	4/256	NT	6.0%	intergenic (‑67/+98)	PP_4760/PP_4761	alcohol dehydrogenase/haloacid dehalogenase‑like family hydrolase
	?	NC_002947	= 5423197	227 (0.890)					intergenic (‑129/+36)	PP_4760/PP_4761	alcohol dehydrogenase/haloacid dehalogenase‑like family hydrolase
*	?	NC_002947	= 5479100	42 (0.150)	20 (0.100)	10/194	NT	31.9%	intergenic (+43/+69)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	= 5479117	56 (0.290)					intergenic (+60/+52)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	5515210 =	129 (0.470)	13 (0.050)	8/274	NT	7.3%	intergenic (+18/‑136)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	5515322 =	204 (0.750)					intergenic (+130/‑24)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	= 5515237	160 (0.580)	31 (0.140)	14/224	NT	17.3%	intergenic (+45/‑109)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	= 5515293	167 (0.750)					intergenic (+101/‑53)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	5562693 =	280 (1.020)	17 (0.070)	12/262	NT	6.5%	intergenic (‑224/+78)	hisZ/hflC	ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase
	?	NC_002947	5562757 =	223 (0.850)					intergenic (‑288/+14)	hisZ/hflC	ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase
*	?	NC_002947	= 5573393	179 (0.650)	10 (0.040)	7/248	NT	5.8%	intergenic (+42/+99)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
	?	NC_002947	= 5573450	166 (0.670)					intergenic (+99/+42)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
*	?	NC_002947	5596065 =	76 (0.280)	24 (0.110)	11/220	NT	26.9%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5596158 =	70 (0.320)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5596092	73 (0.270)	15 (0.070)	4/220	NT	19.0%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5596129	70 (0.320)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	5636579 =	342 (1.240)	18 (0.070)	8/258	NT	5.7%	intergenic (+182/+201)	putA/PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
	?	NC_002947	5636645 =	277 (1.080)					intergenic (+248/+135)	putA/PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
*	?	NC_002947	5673588 =	114 (0.410)	17 (0.070)	9/228	NT	15.5%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5673673 =	91 (0.400)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5673611	90 (0.330)	19 (0.080)	8/228	NT	18.7%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	= 5673648	91 (0.400)					intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	5683319 =	148 (0.540)	13 (0.060)	9/230	NT	11.2%	intergenic (‑63/+145)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
	?	NC_002947	5683434 =	84 (0.370)					intergenic (‑178/+30)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
*	?	NC_002947	= 5694524	263 (0.950)	20 (0.070)	13/268	NT	7.1%	intergenic (+15/‑155)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
	?	NC_002947	= 5694618	271 (1.010)					intergenic (+109/‑61)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
*	?	NC_002947	5700705 =	107 (0.390)	17 (0.070)	10/242	NT	15.4%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5700788 =	93 (0.390)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	= 5700721	102 (0.370)	17 (0.070)	8/242	NT	15.7%	intergenic (+33/‑134)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	= 5700770	93 (0.390)					intergenic (+82/‑85)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	5761382 =	167 (0.610)	24 (0.110)	9/212	NT	22.6%	intergenic (+13/+143)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	5761474 =	36 (0.170)					intergenic (+105/+51)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	5788450 =	129 (0.470)	15 (0.070)	12/228	NT	12.2%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5788535 =	110 (0.480)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	= 5788473	123 (0.450)	17 (0.070)	9/228	NT	13.9%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5788510	110 (0.480)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5818816 =	77 (0.280)	24 (0.090)	9/266	NT	17.4%	intergenic (+24/+105)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5818911 =	154 (0.580)					intergenic (+119/+10)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5818849	89 (0.320)	26 (0.110)	14/240	NT	21.9%	intergenic (+57/+72)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5818876	108 (0.450)					intergenic (+84/+45)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	5829785 =	298 (1.080)	17 (0.060)	10/264	NT	6.4%	intergenic (+9/+190)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
	?	NC_002947	5829909 =	214 (0.810)					intergenic (+133/+66)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
*	?	NC_002947	= 5872267	126 (0.460)	15 (0.070)	12/218	NT	13.6%	intergenic (+50/+84)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	= 5872302	92 (0.420)					intergenic (+85/+49)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5876526 =	262 (0.950)	22 (0.090)	14/254	NT	8.4%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5876608 =	239 (0.940)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	= 5876536	268 (0.970)	13 (0.050)	7/254	NT	5.1%	intergenic (‑50/+98)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	= 5876596	239 (0.940)					intergenic (‑110/+38)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	5878962 =	156 (0.570)	15 (0.070)	10/228	NT	9.8%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5879044 =	148 (0.650)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	= 5905747	166 (0.600)	19 (0.070)	11/256	NT	11.8%	intergenic (+25/+82)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5905809	130 (0.510)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5905749 =	167 (0.610)	36 (0.150)	17/244	NT	21.3%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5905809 =	119 (0.490)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5916135 =	104 (0.380)	24 (0.110)	13/220	NT	21.8%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5916231 =	89 (0.410)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5916162	95 (0.340)	19 (0.090)	13/220	NT	18.8%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5916202	89 (0.410)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5926529	154 (0.560)	9 (0.040)	7/226	NT	5.5%	intergenic (‑121/+76)	gcvP‑II/gcvH‑II	glycine dehydrogenase/glycine cleavage system protein H
	?	NC_002947	= 5926565	181 (0.800)					intergenic (‑157/+40)	gcvP‑II/gcvH‑II	glycine dehydrogenase/glycine cleavage system protein H
*	?	NC_002947	= 5945600	131 (0.480)	12 (0.050)	8/232	NT	8.3%	intergenic (+30/+55)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	= 5945621	154 (0.670)					intergenic (+51/+34)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
*	?	NC_002947	5970388 =	153 (0.560)	8 (0.030)	6/232	NT	7.6%	coding (162/360 nt)	PP_5723	hypothetical protein
	?	NC_002947	5970492 =	66 (0.290)					coding (58/360 nt)	PP_5723	hypothetical protein
*	?	NC_002947	6002881 =	86 (0.310)	13 (0.060)	9/216	NT	16.1%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6002975 =	68 (0.320)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	= 6002910	77 (0.280)	5 (0.020)	4/216	NT	7.2%	intergenic (+39/+70)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	= 6002944	68 (0.320)					intergenic (+73/+36)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	6021226 =	179 (0.650)	17 (0.070)	10/230	NT	10.9%	intergenic (‑49/+96)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	6021302 =	128 (0.560)					intergenic (‑125/+20)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	= 6021248	173 (0.630)	13 (0.060)	11/230	NT	8.7%	intergenic (‑71/+74)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	= 6021278	128 (0.560)					intergenic (‑101/+44)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	6062409 =	144 (0.520)	31 (0.130)	13/248	NT	18.5%	intergenic (+67/+114)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	6062496 =	143 (0.580)					intergenic (+154/+27)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6062433	147 (0.530)	21 (0.080)	12/256	NT	13.2%	intergenic (+91/+90)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	= 6062470	141 (0.550)					intergenic (+128/+53)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6079822	152 (0.550)	13 (0.060)	10/228	NT	8.2%	intergenic (‑146/+92)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
	?	NC_002947	= 6079874	166 (0.730)					intergenic (‑198/+40)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter