Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 2 3
2 2 3
3 2 3
4 2 3
5 2 3
6 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 36 54
Multiple Base Substitutions 0 0
Deletions 1 4
Insertions 8 8
Mobile Element Insertions 2 4
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 47 70

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6 0 98.0 3619480 97.6% 3532612 129.2
A1 F19 I1 R1 6 0 82.4 3062678 97.5% 2986111 128.8
A1 F86 I0 R1 101 0 73.5 2736436 97.6% 2670761 128.9
A1 F86 I4 R1 8 0 78.8 2925756 97.7% 2858463 129.1
A2 F19 I1 R1 7 0 62.5 2303240 97.7% 2250265 129.7
A2 F85 I0 R1 78 0 57.7 2157702 97.6% 2105917 128.9
A2 F85 I4 R1 10 0 63.0 2337626 97.5% 2279185 129.4
A3 F20 I1 R1 6 0 77.3 2852452 97.5% 2781140 129.7
A3 F87 I0 R1 85 0 60.9 2271738 97.6% 2217216 129.4
A3 F87 I7 R1 35 0 77.1 2860104 97.7% 2794321 129.0
A4 F20 I1 R1 6 0 71.3 2644560 97.5% 2578446 129.1
A4 F86 I0 R1 69 0 52.0 1958800 97.4% 1907871 128.2
A4 F86 I6 R1 9 0 111.4 4137710 97.5% 4034267 129.1
A5 F20 I1 R1 6 0 94.9 3519858 97.5% 3431861 128.7
A5 F93 I0 R1 64 0 58.4 2183592 97.7% 2133369 128.8
A5 F93 I5 R1 10 0 72.5 2713570 97.6% 2648444 128.3
A6 F19 I1 R1 6 0 78.3 2897308 97.6% 2827772 128.9
A6 F87 I0 R1 72 0 47.3 1780974 97.5% 1736449 128.2
A6 F87 I5 R1 9 0 64.0 2377186 97.6% 2320133 129.5

Mutation Needle Plot

Mutation Targets

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