mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,501,865 | 0 | A | C | 61.5% | 6.9 / 11.1 | 13 | L123V (TTG→GTG) | fecD | Fe(3+) dicitrate ABC transporter permease subunit FecD |
| * | NZ_CP009273 | 353,601 | 0 | C | A | 58.3% | ‑4.6 / 16.0 | 24 | L267F (TTG→TTT) | cynR | transcriptional regulator CynR |
| * | NZ_CP009273 | 2,342,112 | 0 | T | G | 57.1% | 9.2 / 12.2 | 14 | G40G (GGT→GGG) | yfaE | ferredoxin‑like diferric‑tyrosyl radical cofactor maintenance protein YfaE |
| * | NZ_CP009273 | 3,659,058 | 0 | T | C | 57.1% | 3.9 / 12.5 | 14 | D38G (GAT→GGT) | gadX | acid resistance transcriptional activator GadX |
| * | NZ_CP009273 | 3,776,268 | 0 | T | G | 55.0% | 8.2 / 16.6 | 21 | T252P (ACC→CCC) | gpsA | NAD(P)H‑dependent glycerol‑3‑phosphate dehydrogenase |
| * | NZ_CP009273 | 3,918,949 | 0 | A | C | 53.8% | 12.1 / 14.0 | 13 | G15G (GGT→GGG) | mnmG | tRNA uridine‑5‑carboxymethylaminomethyl(34) synthesis enzyme MnmG |
| * | NZ_CP009273 | 4,368,611 | 0 | G | A | 53.8% | 3.4 / 12.2 | 13 | Q51* (CAG→TAG) | ampC | BlaEC family class C beta‑lactamase |
| * | NZ_CP009273 | 40,515 | 0 | G | T | 53.3% | 12.7 / 20.6 | 15 | Q473K (CAA→AAA) | caiT | L‑carnitine/gamma‑butyrobetaine antiporter |
| * | NZ_CP009273 | 4,455,617 | 0 | C | A | 53.3% | 9.1 / 18.0 | 15 | L127F (TTG→TTT) | treB | PTS trehalose transporter subunit IIBC |
| * | NZ_CP009273 | 353,591 | 0 | T | C | 52.9% | 11.8 / 20.6 | 17 | K271E (AAA→GAA) | cynR | transcriptional regulator CynR |