mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 11 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4349081 = | 81 (1.500) | 3 (0.060) | 3/250 | NT | 3.7% | intergenic (‑337/+234) | dcuB/dcuR | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor/response regulator in two‑component regulatory system with DcuS |
| ? | NC_000913 | 4349097 = | 77 (1.490) | intergenic (‑353/+218) | dcuB/dcuR | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor/response regulator in two‑component regulatory system with DcuS | |||||
| * | ? | NC_000913 | 4235746 = | 81 (1.500) | 3 (0.060) | 3/240 | NT | 4.3% | intergenic (+339/‑160) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein |
| ? | NC_000913 | 4235770 = | 61 (1.230) | intergenic (+363/‑136) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein | |||||
| * | ? | NC_000913 | = 3760171 | 59 (1.090) | 3 (0.060) | 3/250 | NT | 5.0% | coding (1079/1392 nt) | selA | selenocysteine synthase |
| ? | NC_000913 | = 3760184 | 58 (1.120) | coding (1066/1392 nt) | selA | selenocysteine synthase | |||||
| * | ? | NC_000913 | = 3596549 | 62 (1.150) | 3 (0.060) | 3/260 | NT | 4.7% | coding (1012/1110 nt) | livK | leucine transporter subunit |
| ? | NC_000913 | = 3596567 | 59 (1.100) | coding (994/1110 nt) | livK | leucine transporter subunit | |||||
| * | ? | NC_000913 | 3423270 = | 84 (1.550) | 3 (0.060) | 3/246 | NT | 3.5% | intergenic (+76/+153) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 3423291 = | 85 (1.670) | intergenic (+97/+132) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon | |||||
| * | ? | NC_000913 | = 2904148 | 62 (1.150) | 3 (0.060) | 3/248 | NT | 4.7% | intergenic (+774/+599) | ygcE/queE | putative kinase/7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis |
| ? | NC_000913 | = 2904152 | 64 (1.250) | intergenic (+778/+595) | ygcE/queE | putative kinase/7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis | |||||
| * | ? | NC_000913 | 2770504 = | 57 (1.050) | 3 (0.060) | 3/250 | NT | 4.9% | coding (60/237 nt) | ypjK | CP4‑57 prophage; putative inner membrane protein |
| ? | NC_000913 | 2770534 = | 61 (1.180) | coding (90/237 nt) | ypjK | CP4‑57 prophage; putative inner membrane protein | |||||
| * | ? | NC_000913 | 2093136 = | 62 (1.150) | 3 (0.060) | 3/252 | NT | 4.9% | coding (739/1071 nt) | hisC | histidinol‑phosphate aminotransferase |
| ? | NC_000913 | 2093167 = | 56 (1.080) | coding (770/1071 nt) | hisC | histidinol‑phosphate aminotransferase | |||||
| * | ? | NC_000913 | = 987417 | 62 (1.150) | 3 (0.060) | 3/232 | NT | 4.8% | intergenic (‑435/+168) | ompF/asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| ? | NC_000913 | = 987424 | 63 (1.320) | intergenic (‑442/+161) | ompF/asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase | |||||
| * | ? | NC_000913 | 384679 = | 80 (1.480) | 3 (0.060) | 3/250 | NT | 3.8% | intergenic (‑63/‑553) | yaiS/tauA | putative PIG‑L family deacetylase/taurine ABC transporter periplasmic binding protein |
| ? | NC_000913 | 384694 = | 74 (1.430) | intergenic (‑78/‑538) | yaiS/tauA | putative PIG‑L family deacetylase/taurine ABC transporter periplasmic binding protein | |||||