mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 26 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4262715 = | 185 (1.080) | 4 (0.020) | 3/486 | NT | 2.1% | intergenic (+9/‑125) | dusA/pspG | tRNA‑dihydrouridine synthase A/phage shock protein G |
| ? | NC_000913 | 4262859 = | 201 (1.230) | coding (20/243 nt) | pspG | phage shock protein G | |||||
| * | ? | NC_000913 | = 4034102 | 215 (1.260) | 3 (0.020) | 3/490 | NT | 1.4% | coding (958/1452 nt) | trkH | potassium transporter |
| ? | NC_000913 | = 4034172 | 205 (1.240) | coding (1028/1452 nt) | trkH | potassium transporter | |||||
| * | ? | NC_000913 | 4031766 = | 153 (0.890) | 3 (0.020) | 3/498 | NT | 1.7% | coding (606/1332 nt) | pepQ | proline dipeptidase |
| ? | NC_000913 | 4032531 = | 198 (1.180) | coding (40/615 nt) | yigZ | UPF0029 family protein | |||||
| * | ? | NC_000913 | 3817371 = | 205 (1.200) | 4 (0.020) | 4/490 | NT | 1.9% | coding (696/864 nt) | yicC | UPF0701 family protein |
| ? | NC_000913 | 3817610 = | 208 (1.260) | intergenic (+71/‑150) | yicC/dinD | UPF0701 family protein/DNA damage‑inducible protein | |||||
| * | ? | NC_000913 | = 3614763 | 189 (1.100) | 3 (0.020) | 3/484 | NT | 1.7% | coding (1097/1575 nt) | nikA | nickel/heme ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 3614956 | 169 (1.040) | coding (1290/1575 nt) | nikA | nickel/heme ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 3270593 = | 90 (0.530) | 3 (0.020) | 3/492 | NT | 3.4% | intergenic (‑1/+32) | rnpB/garK | RNase P, M1 RNA component/glycerate kinase I |
| ? | NC_000913 | 3270621 = | 83 (0.500) | intergenic (‑29/+4) | rnpB/garK | RNase P, M1 RNA component/glycerate kinase I | |||||
| * | ? | NC_000913 | = 3220246 | 174 (1.020) | 5 (0.030) | 5/488 | NT | 2.8% | coding (753/1380 nt) | patA | putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent |
| ? | NC_000913 | = 3220398 | 179 (1.090) | coding (905/1380 nt) | patA | putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent | |||||
| * | ? | NC_000913 | 2996361 = | NA (NA) | 5 (0.030) | 5/508 | NT | 3.8% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 3368709 = | 126 (0.740) | coding (883/1128 nt) | yhcG | DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily | |||||
| * | ? | NC_000913 | = 2894652 | 174 (1.020) | 4 (0.020) | 4/502 | NT | 2.6% | coding (457/576 nt) | ygcP | putative antiterminator regulatory protein |
| ? | NC_000913 | = 2894931 | 127 (0.750) | coding (849/861 nt) | ygcQ | putative flavoprotein | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 3 (0.020) | 3/506 | NT | 1.6% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3526452 | 183 (1.070) | intergenic (‑303/‑17) | nudE/yrfF | adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein | |||||