| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,886,669 | IS1 (–) +9 bp | intergenic (‑499/+162) | yobF ← / ← yebO | hypothetical protein/hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1886669 = | 9 (0.210) | 91 (1.870) | 64/150 | 0.0 | 89.9% | intergenic (‑499/+170) | yobF/yebO | hypothetical protein/hypothetical protein |
| ? | REL606 | = 2035093 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 1886677 | 9 (0.210) | 60 (1.240) | 45/150 | 0.1 | 85.4% | intergenic (‑507/+162) | yobF/yebO | hypothetical protein/hypothetical protein |
| ? | REL606 | = 1974039 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
CTGGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1886742‑1886669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG < REL606/2035093‑2035019 CTGGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGc < 1:805409/76‑2CTGGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGG < 2:1517398/76‑1CTGGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGG > 1:1418538/1‑76 TGGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGT > 1:1089725/1‑76 GGTCTGACTTCAAATAATTATCATATTATTTATTTGTGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTG > 1:446446/1‑76 GGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTG < 2:519533/76‑1 GGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTG > 1:938728/1‑76 CTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATG > 1:967862/1‑76 TGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGC > 1:507264/1‑76 GACTTCAAATAATCATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCT > 1:1020527/1‑76 ACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTG < 1:829594/76‑1 CTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGC < 1:606566/76‑1 TTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCC > 2:1334649/1‑76 cCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCA > 1:806366/2‑76 TCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCA < 1:774045/76‑1 CAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAn < 1:205051/76‑2 CAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAA > 2:906383/1‑76 AAATAATTATCATATTATTTATTTGCGTAACGGGAGATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAAC > 2:1372205/1‑76 AATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACT < 1:26934/76‑1 AATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACT < 1:1406692/76‑1 AATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACT > 1:999901/1‑76 ATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTT < 2:1490441/76‑1 ATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACT < 2:1327853/76‑1 TTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTG > 2:471281/1‑76 TTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTG > 2:357938/1‑76 TATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGA < 2:1027334/76‑1 ATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGAT > 1:541869/1‑76 TCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATT > 2:753059/1‑76 TCATATTATGTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATTCTGCCAACTTACTGATT < 2:406518/76‑1 CATAGTATTTATTTGCGTAACGGGATATCAGGAAAAGATATTTTCCTCATTAGTGATGCTGCCAACTTACTGATTT < 2:679056/76‑1 ATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGT < 1:1100879/76‑1 TTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTG < 2:1356664/76‑1 TATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGT > 1:428516/1‑76 TATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGT > 1:90680/1‑76 TATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGT < 1:801951/76‑1 ATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTA < 2:889177/76‑1 TTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATG < 2:720049/76‑1 TATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGA > 2:144042/1‑76 TATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGA < 2:1509692/76‑1 TTTGCGTAGCGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG < 2:1242557/76‑1 TTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG < 1:1501477/76‑1 CGTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGT > 1:383808/1‑76 GTAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT > 2:273422/1‑76 TAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT > 2:783614/1‑76 TAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT > 1:31821/1‑76 TAACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT < 2:989854/76‑1 ACGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT > 2:949274/1‑76 CGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG > 1:108942/1‑76 CGGGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG > 2:712076/1‑76 GGATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG > 2:274713/1‑76 GATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG > 1:1320780/1‑76 ATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT > 1:1280766/1‑76 ATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT < 2:1115833/76‑1 ATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT > 2:352886/1‑76 ATATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTATGAGGT > 1:732480/1‑76 TATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG < 2:167172/76‑1 TATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG > 2:396344/1‑76 ATCAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGCGGTGC > 2:1516985/1‑76 CAGAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC > 1:1176039/1‑76 GAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA > 2:610934/1‑76 GAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA < 2:43987/76‑1 GAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA < 2:1069514/76‑1 GAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA < 2:201707/76‑1 GAAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA < 2:1296514/76‑1 AAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 2:1115952/76‑1 AAAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 2:151845/76‑1 AAAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT < 2:1308765/76‑1 AAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG < 1:1090963/76‑1 AAAGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG > 2:420603/1‑76 AGATATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC > 1:1252263/1‑76 TATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC > 1:1334702/1‑76 TATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC < 1:911469/76‑1 ATTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT > 1:712317/1‑76 ATTTTCCGCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT > 1:567379/1‑76 TTTTCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 2:1460049/1‑76 TCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT > 2:1318598/1‑76 TCCTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT > 2:577839/1‑76 CTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT > 2:223539/1‑76 CTCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT < 2:1068312/76‑1 TCATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA > 2:297339/1‑76 tATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT < 2:148054/75‑1 CATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAc > 2:1305534/1‑75 CATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT > 1:854752/1‑76 CATTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT < 2:148066/76‑1 TTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA < 1:1475856/76‑1 TTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA > 1:1293841/1‑76 TTGGAGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGCGCTCCAGTGGCTTCTGTTTCTATCA > 1:1523489/1‑76 TGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTTTATCAG > 2:624428/1‑76 TGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG > 1:980202/1‑76 TGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG < 1:809141/76‑1 TGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG < 2:993719/76‑1 CTGGTCTGACTTCAAATAATTATCATATTATTTATTTGCGTAACGGGATATCAGAAAAAGATATTTTCCTCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1886742‑1886669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG < REL606/2035093‑2035019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |