| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,886,669 | IS1 (–) +9 bp | intergenic (‑499/+162) | yobF ← / ← yebO | hypothetical protein/hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1886669 = | 9 (0.210) | 91 (1.870) | 64/150 | 0.0 | 89.9% | intergenic (‑499/+170) | yobF/yebO | hypothetical protein/hypothetical protein |
| ? | REL606 | = 2035093 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 1886677 | 9 (0.210) | 60 (1.240) | 45/150 | 0.1 | 85.4% | intergenic (‑507/+162) | yobF/yebO | hypothetical protein/hypothetical protein |
| ? | REL606 | = 1974039 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 149 total aligned reads displayed.
GAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCAGAGTTTTAATT > REL606/1886601‑1886752 | gagaAAGTTTTGCCTAATAAAAAATGCCCCGTTTAACAACAAGTCCGTCGT‑AACATCCTAATAAATTAATGAGGaa < 1:1458293/76‑1 (MQ=255) cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGaaaa > 2:1460049‑M1/66‑76 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAat > 1:712317‑M1/65‑76 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAata < 1:911469‑M1/13‑1 (MQ=255) gTTTCGCTAATAAANAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaat > 1:838709‑M1/1‑70 (MQ=255) tttCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatg < 1:1302629‑M1/76‑8 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCt > 1:1252263‑M1/61‑76 (MQ=255) ttCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatga < 2:719277‑M1/76‑9 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCttt < 1:1090963‑M1/18‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCtttt < 2:1308765‑M1/19‑1 (MQ=255) gCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactc > 1:1417402‑M1/1‑65 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCttttt < 2:151845‑M1/20‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:43987‑M1/21‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:1296514‑M1/21‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc > 2:610934‑M1/56‑76 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:201707‑M1/21‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:1069514‑M1/21‑1 (MQ=255) cTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactcc < 2:79160‑M1/76‑13 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTg > 1:1176039‑M1/54‑76 (MQ=255) aataaataATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaa < 2:853460‑M1/76‑15 (MQ=255) aataaataATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaa < 1:1280326‑M1/76‑15 (MQ=255) ataaataaTACCACGCTTAATCACAGATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaac > 1:103159‑M1/1‑61 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGata < 2:167172‑M1/26‑1 (MQ=255) aaataaTACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaactt < 1:1491979‑M1/76‑18 (MQ=255) aaataaTACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaactt > 2:544550‑M1/1‑59 (MQ=255) aaataaTACCACGCATAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGata > 1:818945/1‑76 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGatat > 2:352886‑M1/50‑76 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGatat < 2:1115833‑M1/27‑1 (MQ=255) aataatACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaactta > 1:438823‑M1/1‑58 (MQ=255) aataatACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaactta > 2:264074‑M1/1‑58 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATc > 1:1320780‑M1/49‑76 (MQ=255) aataCCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattg > 1:84374‑M1/1‑55 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCg > 1:108942‑M1/46‑76 (MQ=255) ataCCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCg > 2:1136398/1‑76 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGt > 2:949274‑M1/45‑76 (MQ=255) aCCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgata > 1:1000545‑M1/1‑52 (MQ=255) ccACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatag > 1:567946‑M1/1‑51 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTa > 1:31821‑M1/43‑76 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTa > 2:783614‑M1/43‑76 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTAc > 2:273422‑M1/42‑76 (MQ=255) aCGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtg > 2:1506748‑M1/1‑49 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaa < 1:1501477‑M1/40‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGCTACGCaaa < 2:1242557‑M1/40‑1 (MQ=255) tAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaat > 1:446111/1‑76 (MQ=255) tAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaat > 1:446090/1‑76 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaata < 2:1509692‑M1/42‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaata > 2:144042‑M1/35‑76 (MQ=255) catacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaataa < 2:720049‑M1/43‑1 (MQ=255) aTCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatg > 2:1073857‑M1/1‑42 (MQ=255) tacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaataaat < 2:889177‑M1/45‑1 (MQ=255) acactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAaataaata > 1:428516‑M1/31‑76 (MQ=255) acactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAaataaata < 1:801951‑M1/46‑1 (MQ=255) cactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAataaataa < 2:1356664‑M1/47‑1 (MQ=255) caAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttca < 2:969454‑M1/76‑39 (MQ=255) caAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCCGATATCCCGTTACGCAAataaataa < 2:409602/76‑1 (MQ=255) actaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAaataat < 1:1100879‑M1/48‑1 (MQ=255) aaaTCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcag < 1:1014517‑M1/76‑40 (MQ=255) aTCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagat > 1:736974‑M1/1‑35 (MQ=255) aaatcagtaagttggcagcatcactAATGAGGAAAATATCTTTTCCTGATATCCCGTTACGCAAATAAATACTATg < 2:679056‑M1/51‑1 (MQ=255) ccGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataa < 2:666337‑M1/76‑44 (MQ=255) aatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGa > 2:753059‑M1/25‑76 (MQ=255) aatcagtaagttggcagaatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATACATAATATGa < 2:406518‑M1/52‑1 (MQ=255) cGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataat < 2:217603‑M1/76‑45 (MQ=255) cGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGAt < 2:322812/76‑1 (MQ=255) atcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGAt > 1:541869‑M1/24‑76 (MQ=255) cagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATaa > 2:357938‑M1/22‑76 (MQ=255) aTGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgc < 1:960421‑M1/76‑47 (MQ=255) aTGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttctatgttcagataatgc > 1:524950‑M1/1‑30 (MQ=255) agttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAattatt > 1:999901‑M1/17‑76 (MQ=255) agttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAattatt < 1:1406692‑M1/60‑1 (MQ=255) agttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAattatt < 1:26934‑M1/60‑1 (MQ=255) aCATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg < 1:933871‑M1/76‑53 (MQ=255) ttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTg > 2:906383‑M1/15‑76 (MQ=255) ntggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTg < 1:205051‑M1/62‑1 (MQ=255) cATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga < 2:421344‑M1/76‑54 (MQ=255) tggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGa < 1:774045‑M1/63‑1 (MQ=255) ggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGaa > 2:1334649‑M1/13‑76 (MQ=255) gcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAg < 1:606566‑M1/65‑1 (MQ=255) ccTGATAAATTAATGAGGAAggtaatggctgcaacttattgatagtgttttatgttcagataatgcccgatgactt < 2:816606‑M1/76‑57 (MQ=255) ccTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt < 2:170308‑M1/76‑57 (MQ=255) cagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGt < 1:829594‑M1/66‑1 (MQ=255) agcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATGATTATTTGAAGTc > 1:1020527‑M1/10‑76 (MQ=255) gcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCa > 1:507264‑M1/9‑76 (MQ=255) catcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAg > 1:967862‑M1/8‑76 (MQ=255) taaATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 1:471712‑M1/76‑62 (MQ=255) caccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGAcc < 2:519533‑M1/72‑1 (MQ=255) ttAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca < 2:296320‑M1/76‑66 (MQ=255) gcAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCag < 1:805409‑M1/74‑1 (MQ=255) ccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCag < 2:1517398‑M1/74‑1 (MQ=255) tAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag > 1:1500101‑M1/1‑10 (MQ=255) ggAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac < 1:876519‑M1/76‑73 (MQ=255) ggAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac < 2:1106184‑M1/76‑73 (MQ=255) naaaTATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCAGAGTTTTAAt > 1:230758/2‑76 (MQ=255) aggtaatgactccaacttattgatagtgttttatgttcagataatgcccgattactttgtcatgcagctccaccga > 2:771402‑M1/1‑1 (MQ=255) aggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 2:627668‑M1/1‑1 (MQ=255) aggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 1:1170881‑M1/1‑1 (MQ=255) aggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 1:1539597‑M1/1‑1 (MQ=255) aggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 1:34387‑M1/1‑1 (MQ=255) aggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 1:867561‑M1/1‑1 (MQ=255) aggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga < 1:727592‑M1/76‑76 (MQ=255) | GAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCAGAGTTTTAATT > REL606/1886601‑1886752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |