| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,886,669 | IS1 (–) +9 bp | intergenic (‑499/+162) | yobF ← / ← yebO | hypothetical protein/hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1886669 = | 9 (0.210) | 91 (1.870) | 64/150 | 0.0 | 89.9% | intergenic (‑499/+170) | yobF/yebO | hypothetical protein/hypothetical protein |
| ? | REL606 | = 2035093 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
| * | ? | REL606 | = 1886677 | 9 (0.210) | 60 (1.240) | 45/150 | 0.1 | 85.4% | intergenic (‑507/+162) | yobF/yebO | hypothetical protein/hypothetical protein |
| ? | REL606 | = 1974039 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 160 total aligned reads displayed.
ATCAAGAGAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCAGA > REL606/1886594‑1886743 | ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacca < 1:809141‑M1/1‑1 (MQ=255)ctgataaaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacca > 2:624428‑M1/76‑76 (MQ=255) tgatagaaacagaagccactggagcgcctcaaaaacaccatcatacactaaatcagtaagttggcagcatctccaa > 1:1523489‑M1/75‑76 (MQ=255) tCAAGAGAGGAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTaa < 1:598372/76‑1 (MQ=255) cAAGAGAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAAt > 2:837880/1‑76 (MQ=255) cAAGAGAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAAt < 2:508189/76‑1 (MQ=255) cAAGAGAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAAt > 1:252126/1‑76 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAata < 2:148054‑M1/4‑2 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATg < 2:148066‑M1/4‑1 (MQ=255) aaGAGAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATg < 2:240639/76‑1 (MQ=255) aaGAGAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATg < 2:312026/76‑1 (MQ=255) gagagaAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAg < 1:452841/76‑1 (MQ=255) gagagaAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAg < 2:350046/76‑1 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAg > 2:223539‑M1/71‑76 (MQ=255) agagaAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAgg < 2:1532763/76‑1 (MQ=255) gagaAAGTTTTGCCTAATAAAAAATGCCCCGTTTAACAACAAGTCCGTCGT‑AACATCCTAATAAATTAATGAGGaa < 1:1458293/76‑1 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGa > 2:1318598‑M1/69‑76 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGa > 2:577839‑M1/69‑76 (MQ=255) gAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAg > 1:1246450‑M1/1‑75 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAat > 1:712317‑M1/65‑76 (MQ=255) gTTTCGCTAATAAANAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaat > 1:838709‑M1/1‑70 (MQ=255) tttCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatg < 1:1302629‑M1/76‑8 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCt > 1:1252263‑M1/61‑76 (MQ=255) ttCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatga < 2:719277‑M1/76‑9 (MQ=255) cGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgact > 1:1104341‑M1/1‑66 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCtttt < 2:1308765‑M1/19‑1 (MQ=255) gCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactc > 1:1417402‑M1/1‑65 (MQ=255) gCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactc < 1:781868‑M1/76‑12 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:1069514‑M1/21‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:43987‑M1/21‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc > 2:610934‑M1/56‑76 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:1296514‑M1/21‑1 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTc < 2:201707‑M1/21‑1 (MQ=255) cTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactcc < 2:79160‑M1/76‑13 (MQ=255) ataaataaTACCACGCTTAATCACAGATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaac > 1:103159‑M1/1‑61 (MQ=255) ataaataaTACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaac < 1:508574‑M1/76‑16 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGata > 2:396344‑M1/51‑76 (MQ=255) aaataaTACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaactt < 1:1491979‑M1/76‑18 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGatat > 1:1280766‑M1/50‑76 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGatat < 2:1115833‑M1/27‑1 (MQ=255) aataatACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaactta > 1:438823‑M1/1‑58 (MQ=255) aataatACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaactta > 2:264074‑M1/1‑58 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATc > 1:1320780‑M1/49‑76 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATcc > 2:274713‑M1/48‑76 (MQ=255) aataCCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattg > 1:84374‑M1/1‑55 (MQ=255) ataCCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCg > 2:1136398/1‑76 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGt > 2:949274‑M1/45‑76 (MQ=255) aCCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgata > 1:1000545‑M1/1‑52 (MQ=255) ccACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatag > 1:567946‑M1/1‑51 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTa < 2:989854‑M1/34‑1 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTa > 1:31821‑M1/43‑76 (MQ=255) aCGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtg > 2:1506748‑M1/1‑49 (MQ=255) cGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgt < 2:344512‑M1/76‑29 (MQ=255) ttAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgtttt > 1:284037‑M1/1‑45 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGCTACGCaaa < 2:1242557‑M1/40‑1 (MQ=255) tAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgtttta < 2:1530263‑M1/76‑33 (MQ=255) tAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaat > 1:446090/1‑76 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaata < 2:1509692‑M1/42‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaata > 2:144042‑M1/35‑76 (MQ=255) aTCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaataa < 2:939293/76‑1 (MQ=255) tacactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCaaataaat < 2:889177‑M1/45‑1 (MQ=255) cacaAATCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgtt < 2:888919‑M1/76‑37 (MQ=255) acactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAaataaata > 1:428516‑M1/31‑76 (MQ=255) acactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAaataaata < 1:801951‑M1/46‑1 (MQ=255) acactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAaataaata > 1:90680‑M1/31‑76 (MQ=255) cactaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAataaataa < 2:1356664‑M1/47‑1 (MQ=255) caAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCCGATATCCCGTTACGCAAataaataa < 2:409602/76‑1 (MQ=255) actaaatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAaataat < 1:1100879‑M1/48‑1 (MQ=255) aaaTCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcag < 1:1014517‑M1/76‑40 (MQ=255) aTCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagat > 1:736974‑M1/1‑35 (MQ=255) tCCGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagata < 1:703954‑M1/76‑43 (MQ=255) aaatcagtaagttggcagcatcactAATGAGGAAAATATCTTTTCCTGATATCCCGTTACGCAAATAAATACTATg < 2:679056‑M1/51‑1 (MQ=255) ccGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataa < 2:666337‑M1/76‑44 (MQ=255) aatcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGa > 2:753059‑M1/25‑76 (MQ=255) cGATGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataat > 1:866040‑M1/1‑32 (MQ=255) atcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGAt > 1:541869‑M1/24‑76 (MQ=255) tcagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATa < 2:1027334‑M1/54‑1 (MQ=255) cagtaagttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATaa > 2:357938‑M1/22‑76 (MQ=255) aTGTAAACATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgc < 1:960421‑M1/76‑47 (MQ=255) agttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAattatt > 1:999901‑M1/17‑76 (MQ=255) agttggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAattatt < 1:1406692‑M1/60‑1 (MQ=255) aCATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg < 1:933871‑M1/76‑53 (MQ=255) ntggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTg < 1:205051‑M1/62‑1 (MQ=255) cATCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga < 2:421344‑M1/76‑54 (MQ=255) tggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTtgg > 1:806366‑M1/14‑75 (MQ=255) tCCTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact > 2:748069‑M1/1‑21 (MQ=255) ggcagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGaa > 2:1334649‑M1/13‑76 (MQ=255) ccTAATAAATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt < 2:170308‑M1/76‑57 (MQ=255) cagcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGt < 1:829594‑M1/66‑1 (MQ=255) gcatcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCa > 1:507264‑M1/9‑76 (MQ=255) aataaATGAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcacgatgactttgt < 2:1099184‑M1/76‑60 (MQ=255) catcaccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAg > 1:967862‑M1/8‑76 (MQ=255) taaATTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 2:794510‑M1/76‑62 (MQ=255) caccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGAcc < 2:519533‑M1/72‑1 (MQ=255) caccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACACAAATAAATAATATGATAATTATTTGAAGTCAGAcc > 1:446446‑M1/5‑76 (MQ=255) accAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCa > 1:1089725‑M1/4‑76 (MQ=255) aTTAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc < 1:1029534‑M1/76‑65 (MQ=255) ttAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca < 2:296320‑M1/76‑66 (MQ=255) ccAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCag < 2:1517398‑M1/74‑1 (MQ=255) tAATGAGGAAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag > 1:1500101‑M1/1‑10 (MQ=255) | ATCAAGAGAGAAACGTTTCGCTAATAAATAATACCACGCTTAATCACAAATCCGATGTAAACATCCTAATAAATTAATGAGGAAAATATCTTTTTCTGATATCCCGTTACGCAAATAAATAATATGATAATTATTTGAAGTCAGACCAGA > REL606/1886594‑1886743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |