mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 213 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6143048 = | 392 (1.040) | 10 (0.030) | 6/268 | NT | 2.6% | coding (498/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein |
| ? | NC_002947 | 6143103 = | 362 (0.990) | coding (553/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein | |||||
| * | ? | NC_002947 | = 6060157 | 277 (0.740) | 12 (0.030) | 9/260 | NT | 4.4% | coding (105/732 nt) | tonB | TonB energy transducing system subunit TonB |
| ? | NC_002947 | = 6060197 | 261 (0.740) | coding (145/732 nt) | tonB | TonB energy transducing system subunit TonB | |||||
| * | ? | NC_002947 | 6024031 = | 511 (1.360) | 8 (0.020) | 6/258 | NT | 1.7% | coding (174/1074 nt) | dadX | alanine racemase |
| ? | NC_002947 | 6024094 = | 446 (1.270) | coding (111/1074 nt) | dadX | alanine racemase | |||||
| * | ? | NC_002947 | = 6018422 | 338 (0.900) | 14 (0.040) | 9/268 | NT | 4.1% | coding (195/573 nt) | xpt | xanthine phosphoribosyltransferase |
| ? | NC_002947 | = 6018460 | 334 (0.920) | coding (233/573 nt) | xpt | xanthine phosphoribosyltransferase | |||||
| * | ? | NC_002947 | 6004654 = | 406 (1.080) | 5 (0.010) | 5/260 | NT | 1.3% | coding (184/1428 nt) | PP_5256 | cyclic nucleotide‑binding protein |
| ? | NC_002947 | 6004694 = | 359 (1.010) | coding (224/1428 nt) | PP_5256 | cyclic nucleotide‑binding protein | |||||
| * | ? | NC_002947 | = 5964088 | 338 (0.900) | 16 (0.040) | 10/266 | NT | 4.4% | coding (2487/2856 nt) | cyaA | adenylate cyclase |
| ? | NC_002947 | = 5964138 | 373 (1.030) | coding (2537/2856 nt) | cyaA | adenylate cyclase | |||||
| * | ? | NC_002947 | 5942581 = | 371 (0.990) | 9 (0.030) | 6/260 | NT | 2.7% | coding (137/2721 nt) | rbbA | ribosome‑associated ATPase |
| ? | NC_002947 | 5942624 = | 300 (0.850) | coding (180/2721 nt) | rbbA | ribosome‑associated ATPase | |||||
| * | ? | NC_002947 | 5874704 = | 350 (0.930) | 12 (0.030) | 8/264 | NT | 3.6% | coding (207/747 nt) | PP_5144 | hypothetical protein |
| ? | NC_002947 | 5874741 = | 312 (0.870) | coding (244/747 nt) | PP_5144 | hypothetical protein | |||||
| * | ? | NC_002947 | 5873795 = | 334 (0.890) | 7 (0.020) | 6/268 | NT | 2.1% | coding (573/783 nt) | PP_5143 | membrane protein |
| ? | NC_002947 | 5873847 = | 316 (0.870) | coding (521/783 nt) | PP_5143 | membrane protein | |||||
| * | ? | NC_002947 | 5804892 = | 351 (0.930) | 9 (0.030) | 6/262 | NT | 2.7% | coding (1089/1098 nt) | aroB | 3‑dehydroquinate synthase |
| ? | NC_002947 | 5804929 = | 305 (0.860) | coding (1052/1098 nt) | aroB | 3‑dehydroquinate synthase | |||||