mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 311 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6123831 | 188 (1.140) | 4 (0.030) | 4/256 | NT | 2.2% | coding (297/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase |
| ? | NC_002947 | = 6123865 | 177 (1.130) | coding (263/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase | |||||
| * | ? | NC_002947 | 6123127 = | 143 (0.870) | 4 (0.030) | 3/254 | NT | 2.8% | coding (1001/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase |
| ? | NC_002947 | 6123179 = | 145 (0.930) | coding (949/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase | |||||
| * | ? | NC_002947 | = 6119349 | 149 (0.910) | 5 (0.030) | 4/264 | NT | 3.4% | coding (404/471 nt) | PP_5367 | transketolase domain‑containing protein |
| ? | NC_002947 | = 6119393 | 140 (0.860) | coding (360/471 nt) | PP_5367 | transketolase domain‑containing protein | |||||
| * | ? | NC_002947 | = 6075483 | 186 (1.130) | 4 (0.030) | 4/258 | NT | 2.1% | coding (751/1671 nt) | PP_5327 | phosphate ABC transporter permease |
| ? | NC_002947 | = 6075499 | 188 (1.190) | coding (735/1671 nt) | PP_5327 | phosphate ABC transporter permease | |||||
| * | ? | NC_002947 | 6060654 = | 142 (0.860) | 4 (0.030) | 3/242 | NT | 3.3% | coding (1873/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase |
| ? | NC_002947 | 6060723 = | 105 (0.710) | coding (1942/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase | |||||
| * | ? | NC_002947 | = 6054428 | 213 (1.290) | 10 (0.060) | 6/258 | NT | 4.7% | intergenic (+11/+159) | PP_5304/PP_5305 | lipoprotein/epimerase/dehydratase‑like protein |
| ? | NC_002947 | = 6054523 | 203 (1.280) | intergenic (+106/+64) | PP_5304/PP_5305 | lipoprotein/epimerase/dehydratase‑like protein | |||||
| * | ? | NC_002947 | 6037052 = | 223 (1.360) | 3 (0.020) | 3/260 | NT | 1.4% | coding (180/456 nt) | dut | deoxyuridine 5'‑triphosphate nucleotidohydrolase |
| ? | NC_002947 | 6037088 = | 212 (1.330) | coding (216/456 nt) | dut | deoxyuridine 5'‑triphosphate nucleotidohydrolase | |||||
| * | ? | NC_002947 | 6010601 = | 189 (1.150) | 7 (0.050) | 4/252 | NT | 3.7% | coding (909/1389 nt) | norM | multidrug resistance protein NorM |
| ? | NC_002947 | 6010636 = | 182 (1.180) | coding (944/1389 nt) | norM | multidrug resistance protein NorM | |||||
| * | ? | NC_002947 | 6000069 = | 164 (1.000) | 5 (0.030) | 5/266 | NT | 2.9% | coding (338/339 nt) | PP_5254 | hypothetical protein |
| ? | NC_002947 | 6000099 = | 177 (1.080) | coding (308/339 nt) | PP_5254 | hypothetical protein | |||||
| * | ? | NC_002947 | 5992797 = | 171 (1.040) | 5 (0.030) | 4/244 | NT | 3.4% | intergenic (‑153/‑76) | ycaC‑III/PP_5249 | putative hydrolase/LysR family transcriptional regulator |
| ? | NC_002947 | 5992841 = | 128 (0.850) | intergenic (‑197/‑32) | ycaC‑III/PP_5249 | putative hydrolase/LysR family transcriptional regulator | |||||