mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4546998 | 136 (1.200) | 3 (0.030) | 3/486 | NT | 2.2% | coding (1903/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher |
| ? | NC_000913 | 4547003 = | 132 (1.180) | coding (1908/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher | |||||
| * | ? | NC_000913 | 3800532 = | 125 (1.100) | 3 (0.030) | 3/488 | NT | 2.5% | coding (434/699 nt) | waaY | lipopolysaccharide core biosynthesis protein |
| ? | NC_000913 | 3800664 = | 111 (0.990) | coding (302/699 nt) | waaY | lipopolysaccharide core biosynthesis protein | |||||
| * | ? | NC_000913 | 2524828 = | 104 (0.920) | 3 (0.030) | 3/486 | NT | 2.8% | coding (51/834 nt) | xapA | purine nucleoside phosphorylase 2; nicotinamide 1‑beta‑D‑riboside synthase |
| ? | NC_000913 | 2524837 = | 106 (0.950) | coding (42/834 nt) | xapA | purine nucleoside phosphorylase 2; nicotinamide 1‑beta‑D‑riboside synthase | |||||
| * | ? | NC_000913 | = 1648929 | 88 (0.780) | 3 (0.030) | 3/492 | NT | 3.3% | coding (107/219 nt) | ydfC | uncharacterized protein, Qin prophage |
| ? | NC_000913 | 1648933 = | 89 (0.790) | coding (111/219 nt) | ydfC | uncharacterized protein, Qin prophage | |||||
| * | ? | NC_000913 | = 217135 | 114 (1.000) | 4 (0.040) | 3/476 | NT | 3.5% | coding (1641/1719 nt) | proS | prolyl‑tRNA synthetase |
| ? | NC_000913 | = 217144 | 111 (1.010) | coding (1632/1719 nt) | proS | prolyl‑tRNA synthetase | |||||