mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 85 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4636324 = | 88 (1.010) | 3 (0.040) | 3/250 | NT | 3.4% | coding (318/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | 4636375 = | 89 (1.080) | coding (369/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4634391 = | 78 (0.900) | 3 (0.040) | 3/250 | NT | 4.0% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 70 (0.850) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | = 4520639 | 115 (1.320) | 4 (0.050) | 4/252 | NT | 3.5% | intergenic (‑315/+32) | yjhU/yjhF | putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter |
| ? | NC_000913 | = 4520652 | 114 (1.370) | intergenic (‑328/+19) | yjhU/yjhF | putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter | |||||
| * | ? | NC_000913 | 4511910 = | 83 (0.950) | 4 (0.050) | 4/254 | NT | 4.9% | coding (505/957 nt) | fecD | ferric citrate ABC transporter permease |
| ? | NC_000913 | 4511933 = | 77 (0.920) | coding (482/957 nt) | fecD | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | = 4488423 | 105 (1.210) | 4 (0.050) | 7/240 | NT | 4.0% | intergenic (+23/+138) | lptG/yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold |
| ? | NC_000913 | = 4488427 | 98 (1.240) | intergenic (+27/+134) | lptG/yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold | |||||
| * | ? | NC_000913 | 4488412 = | 99 (1.140) | 3 (0.040) | 3/240 | NT | 3.1% | intergenic (+12/+149) | lptG/yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold |
| ? | NC_000913 | 4488440 = | 98 (1.240) | intergenic (+40/+121) | lptG/yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold | |||||
| * | ? | NC_000913 | = 4451383 | 88 (1.010) | 3 (0.040) | 3/252 | NT | 3.2% | coding (326/1503 nt) | ytfR | putative sugar ABC transporter ATPase |
| ? | NC_000913 | = 4451398 | 95 (1.150) | coding (341/1503 nt) | ytfR | putative sugar ABC transporter ATPase | |||||
| * | ? | NC_000913 | = 4440792 | 108 (1.240) | 3 (0.040) | 3/258 | NT | 2.6% | coding (424/1344 nt) | ytfL | UPF0053 family inner membrane protein |
| ? | NC_000913 | = 4440850 | 116 (1.370) | coding (366/1344 nt) | ytfL | UPF0053 family inner membrane protein | |||||
| * | ? | NC_000913 | 4439002 = | 108 (1.240) | 2 (0.020) | 3/248 | NT | 2.0% | coding (261/555 nt) | ytfJ | putative transcriptional regulator |
| ? | NC_000913 | 4439028 = | 92 (1.130) | coding (235/555 nt) | ytfJ | putative transcriptional regulator | |||||
| * | ? | NC_000913 | 4399866 = | 126 (1.450) | 3 (0.040) | 3/256 | NT | 2.5% | coding (615/951 nt) | miaA | delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase |
| ? | NC_000913 | 4399882 = | 115 (1.360) | coding (631/951 nt) | miaA | delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase | |||||