mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3798233 | 468 (5.630) | 4 (0.050) | 5/234 | NT | 0.90% | intergenic (+26/+6) | waaL/waaU | O‑antigen ligase/lipopolysaccharide core biosynthesis |
| ? | NC_000913 | = 3798235 | 458 (6.130) | intergenic (+28/+4) | waaL/waaU | O‑antigen ligase/lipopolysaccharide core biosynthesis | |||||
| * | ? | NC_000913 | 3289918 = | 87 (1.050) | 3 (0.040) | 3/246 | NT | 3.5% | coding (1105/2517 nt) | yraJ | putative outer membrane protein |
| ? | NC_000913 | 3289945 = | 84 (1.070) | coding (1132/2517 nt) | yraJ | putative outer membrane protein | |||||
| * | ? | NC_000913 | 1330387 = | 95 (1.140) | 4 (0.050) | 5/240 | NT | 4.5% | intergenic (+6/+30) | sohB/yciN | inner membrane protein, S49 peptidase family protein/DUF2498 protein YciN |
| ? | NC_000913 | 1330413 = | 84 (1.100) | intergenic (+32/+4) | sohB/yciN | inner membrane protein, S49 peptidase family protein/DUF2498 protein YciN | |||||
| * | ? | NC_000913 | 1212508 = | 157 (1.890) | 3 (0.040) | 3/248 | NT | 1.9% | intergenic (‑505/+195) | iraM/ycgX | RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein |
| ? | NC_000913 | 1212523 = | 160 (2.020) | intergenic (‑520/+180) | iraM/ycgX | RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein | |||||
| * | ? | NC_000913 | 1052247 = | 83 (1.000) | 3 (0.040) | 5/240 | NT | 3.9% | intergenic (+7/+42) | gnsA/yccM | putative phosphatidylethanolamine synthesis regulator/putative 4Fe‑4S membrane protein |
| ? | NC_000913 | 1052275 = | 70 (0.910) | intergenic (+35/+14) | gnsA/yccM | putative phosphatidylethanolamine synthesis regulator/putative 4Fe‑4S membrane protein | |||||
| * | ? | NC_000913 | = 394471 | 93 (1.120) | 3 (0.040) | 3/234 | NT | 3.2% | intergenic (+53/‑35) | yaiT/yaiV | pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein/putative transcriptional regulator |
| ? | NC_000913 | = 394475 | 98 (1.310) | intergenic (+57/‑31) | yaiT/yaiV | pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein/putative transcriptional regulator | |||||