mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 20 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4241886 = | 103 (1.150) | 5 (0.060) | 5/238 | NT | 4.8% | coding (369/1476 nt) | xylE | D‑xylose transporter |
| ? | NC_000913 | 4241903 = | 100 (1.150) | coding (352/1476 nt) | xylE | D‑xylose transporter | |||||
| * | ? | NC_000913 | 4200145 = | 103 (1.150) | 3 (0.040) | 3/224 | NT | 3.0% | intergenic (+51/‑136) | yjaG/hupA | DUF416 domain protein/HU, DNA‑binding transcriptional regulator, alpha subunit |
| ? | NC_000913 | 4200182 = | 101 (1.240) | intergenic (+88/‑99) | yjaG/hupA | DUF416 domain protein/HU, DNA‑binding transcriptional regulator, alpha subunit | |||||
| * | ? | NC_000913 | 4003233 = | 87 (0.970) | 4 (0.050) | 4/230 | NT | 4.8% | intergenic (‑40/+55) | yigG/rarD | PRK11371 family inner membrane protein/putative chloramphenical resistance permease |
| ? | NC_000913 | 4003267 = | 76 (0.910) | intergenic (‑74/+21) | yigG/rarD | PRK11371 family inner membrane protein/putative chloramphenical resistance permease | |||||
| * | ? | NC_000913 | = 3888411 | 174 (1.940) | 4 (0.050) | 4/236 | NT | 2.4% | intergenic (+219/‑24) | mnmE/tnaC | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide |
| ? | NC_000913 | = 3888418 | 157 (1.830) | intergenic (+226/‑17) | mnmE/tnaC | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide | |||||
| * | ? | NC_000913 | = 3800403 | 161 (1.790) | 4 (0.050) | 4/238 | NT | 2.5% | coding (563/699 nt) | waaY | lipopolysaccharide core biosynthesis protein |
| ? | NC_000913 | = 3800415 | 152 (1.750) | coding (551/699 nt) | waaY | lipopolysaccharide core biosynthesis protein | |||||
| * | ? | NC_000913 | 3726887 = | 125 (1.390) | 3 (0.040) | 3/224 | NT | 2.7% | intergenic (+5/+37) | wecH/yiaA | O‑acetyltransferase for enterobacterial common antigen (ECA)/YiaAB family inner membrane protein, tandem domains |
| ? | NC_000913 | 3726917 = | 100 (1.230) | intergenic (+35/+7) | wecH/yiaA | O‑acetyltransferase for enterobacterial common antigen (ECA)/YiaAB family inner membrane protein, tandem domains | |||||
| * | ? | NC_000913 | 3696141 = | 89 (0.990) | 3 (0.030) | 3/238 | NT | 3.2% | coding (45/189 nt) | yhjR | DUF2629 family protein |
| ? | NC_000913 | 3696160 = | 93 (1.070) | coding (26/189 nt) | yhjR | DUF2629 family protein | |||||
| * | ? | NC_000913 | = 3499875 | 127 (1.420) | 6 (0.070) | 6/240 | NT | 4.5% | intergenic (+260/‑35) | yhfL/frlA | small lipoprotein/putative fructoselysine transporter |
| ? | NC_000913 | = 3499888 | 129 (1.470) | intergenic (+273/‑22) | yhfL/frlA | small lipoprotein/putative fructoselysine transporter | |||||
| * | ? | NC_000913 | = 3408489 | 93 (1.040) | 3 (0.030) | 3/236 | NT | 3.4% | coding (883/1452 nt) | panF | pantothenate:sodium symporter |
| ? | NC_000913 | = 3408518 | 82 (0.950) | coding (912/1452 nt) | panF | pantothenate:sodium symporter | |||||
| * | ? | NC_000913 | = 3011485 | 101 (1.130) | 4 (0.050) | 4/234 | NT | 4.0% | coding (25/933 nt) | yqeA | putative amino acid kinase |
| ? | NC_000913 | = 3011501 | 98 (1.150) | coding (41/933 nt) | yqeA | putative amino acid kinase | |||||