mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3222459 = | 42 (1.000) | 3 (0.080) | 3/258 | 6.0 | 7.1% | intergenic (+12/‑172) | ebgR/ebgA | transcriptional repressor/evolved beta‑D‑galactosidase, alpha subunit |
| ? | NC_000913 | 3222491 = | 40 (1.050) | intergenic (+44/‑140) | ebgR/ebgA | transcriptional repressor/evolved beta‑D‑galactosidase, alpha subunit | |||||
| * | ? | NC_000913 | 1715908 = | 48 (1.140) | 3 (0.080) | 3/262 | 6.1 | 6.0% | intergenic (‑19/+40) | pdxY/tyrS | pyridoxamine kinase/tyrosyl‑tRNA synthetase |
| ? | NC_000913 | 1715934 = | 49 (1.260) | intergenic (‑45/+14) | pdxY/tyrS | pyridoxamine kinase/tyrosyl‑tRNA synthetase | |||||
| * | ? | NC_000913 | = 4179655 | 42 (1.000) | 3 (0.070) | 3/272 | 6.3 | 8.2% | intergenic (+73/‑340) | rplA/rplJ | 50S ribosomal subunit protein L1/50S ribosomal subunit protein L10 |
| ? | NC_000913 | = 4179765 | 27 (0.670) | intergenic (+183/‑230) | rplA/rplJ | 50S ribosomal subunit protein L1/50S ribosomal subunit protein L10 | |||||
| * | ? | NC_000913 | = 2532464 | 53 (1.260) | 3 (0.070) | 3/272 | 6.3 | 5.7% | coding (58/972 nt) | cysK | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit |
| ? | NC_000913 | = 2532492 | 48 (1.190) | coding (86/972 nt) | cysK | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit | |||||
| * | ? | NC_000913 | = 2434254 | 35 (0.830) | 3 (0.070) | 3/274 | 6.3 | 7.9% | coding (486/660 nt) | dedA | DedA family inner membrane protein |
| ? | NC_000913 | = 2434267 | 36 (0.890) | coding (473/660 nt) | dedA | DedA family inner membrane protein | |||||
| * | ? | NC_000913 | = 1428264 | NA (NA) | 17 (0.420) | 3/272 | 6.3 | 100% | coding (463/981 nt) | insH1 | IS5 transposase and trans‑activator |
| ? | NC_000913 | = 2066866 | 0 (0.000) | coding (456/1017 nt) | insH1 | IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | 1396531 = | NA (NA) | 15 (0.370) | 3/272 | 6.3 | NA | coding (456/1017 nt) | insH1 | IS5 transposase and trans‑activator |
| ? | NC_000913 | = 1428264 | NA (NA) | coding (463/981 nt) | insH1 | IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | 1267118 = | 37 (0.880) | 3 (0.070) | 3/272 | 6.3 | 8.0% | coding (195/393 nt) | ychQ | SIRB family inner membrane protein |
| ? | NC_000913 | 1267138 = | 34 (0.840) | coding (215/393 nt) | ychQ | SIRB family inner membrane protein | |||||
| * | ? | NC_000913 | 183810 = | 35 (0.830) | 3 (0.070) | 3/272 | 6.3 | 7.8% | coding (286/387 nt) | yaeH | UPF0325 family protein |
| ? | NC_000913 | 183847 = | 37 (0.920) | coding (249/387 nt) | yaeH | UPF0325 family protein | |||||
| * | ? | NC_000913 | = 3424225 | NA (NA) | 5 (0.120) | 3/280 | 6.5 | NA | noncoding (2557/2904 nt) | rrlD | 23S ribosomal RNA of rrnD operon |
| ? | NC_000913 | = 3424230 | NA (NA) | noncoding (2552/2904 nt) | rrlD | 23S ribosomal RNA of rrnD operon | |||||