mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 55 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4611474 | 56 (0.860) | 3 (0.050) | 3/256 | NT | 4.8% | coding (79/606 nt) | osmY | salt‑inducible putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 4611492 | 65 (1.020) | coding (97/606 nt) | osmY | salt‑inducible putative ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 4417665 = | 76 (1.170) | 3 (0.050) | 3/244 | NT | 3.9% | coding (714/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | 4417698 = | 78 (1.280) | coding (747/750 nt) coding (756/756 nt) |
yjfP ulaR |
acyl CoA esterase transcriptional repressor for the L‑ascorbate utilization divergent operon |
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| * | ? | NC_000913 | 4406040 = | 76 (1.170) | 3 (0.050) | 3/242 | NT | 4.5% | intergenic (+55/‑150) | purA/nsrR | adenylosuccinate synthetase/nitric oxide‑sensitive repressor for NO regulon |
| ? | NC_000913 | 4406075 = | 58 (0.960) | intergenic (+90/‑115) | purA/nsrR | adenylosuccinate synthetase/nitric oxide‑sensitive repressor for NO regulon | |||||
| * | ? | NC_000913 | 4356201 = | 76 (1.170) | 3 (0.050) | 3/250 | NT | 4.1% | coding (211/1458 nt) | dtpC | dipeptide and tripeptide permease |
| ? | NC_000913 | 4356223 = | 69 (1.110) | coding (189/1458 nt) | dtpC | dipeptide and tripeptide permease | |||||
| * | ? | NC_000913 | = 4246671 | 77 (1.190) | 3 (0.050) | 3/250 | NT | 3.7% | intergenic (‑252/‑113) | malE/malK | maltose transporter subunit/maltose ABC transportor ATPase |
| ? | NC_000913 | = 4246695 | 80 (1.280) | intergenic (‑276/‑89) | malE/malK | maltose transporter subunit/maltose ABC transportor ATPase | |||||
| * | ? | NC_000913 | = 4107585 | 81 (1.250) | 4 (0.060) | 4/248 | NT | 4.8% | coding (34/963 nt) | pfkA | 6‑phosphofructokinase I |
| ? | NC_000913 | = 4107604 | 80 (1.290) | coding (53/963 nt) | pfkA | 6‑phosphofructokinase I | |||||
| * | ? | NC_000913 | = 4074181 | 62 (0.960) | 3 (0.050) | 3/252 | NT | 4.9% | coding (443/897 nt) | yihV | 6‑deoxy‑6‑sulphofructose kinase |
| ? | NC_000913 | = 4074200 | 56 (0.890) | coding (462/897 nt) | yihV | 6‑deoxy‑6‑sulphofructose kinase | |||||
| * | ? | NC_000913 | 3973794 = | 82 (1.260) | 4 (0.060) | 4/252 | NT | 4.9% | coding (187/882 nt) | rffH | glucose‑1‑phosphate thymidylyltransferase |
| ? | NC_000913 | 3973807 = | 75 (1.190) | coding (200/882 nt) | rffH | glucose‑1‑phosphate thymidylyltransferase | |||||
| * | ? | NC_000913 | = 3922228 | 76 (1.170) | 3 (0.050) | 3/250 | NT | 3.8% | coding (213/381 nt) | atpI | ATP synthase, membrane‑bound accessory factor |
| ? | NC_000913 | = 3922232 | 77 (1.240) | coding (209/381 nt) | atpI | ATP synthase, membrane‑bound accessory factor | |||||
| * | ? | NC_000913 | = 3890165 | 78 (1.200) | 3 (0.050) | 3/240 | NT | 4.0% | intergenic (+20/‑71) | tnaA/tnaB | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/tryptophan transporter of low affinity |
| ? | NC_000913 | = 3890174 | 73 (1.220) | intergenic (+29/‑62) | tnaA/tnaB | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/tryptophan transporter of low affinity | |||||