mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 55 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4523842 = | 93 (0.940) | 3 (0.030) | 3/250 | NT | 3.3% | coding (253/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | 4523877 = | 86 (0.900) | coding (218/1968 nt) | yjhG | putative dehydratase | |||||
| * | ? | NC_000913 | = 4423781 | 75 (0.760) | 3 (0.030) | 3/244 | NT | 3.8% | coding (82/687 nt) | ulaF | L‑ribulose 5‑phosphate 4‑epimerase |
| ? | NC_000913 | = 4423830 | 81 (0.870) | coding (131/687 nt) | ulaF | L‑ribulose 5‑phosphate 4‑epimerase | |||||
| * | ? | NC_000913 | 4314079 = | 97 (0.980) | 3 (0.030) | 3/250 | NT | 3.0% | coding (212/330 nt) | yjdP | putative periplasmic protein |
| ? | NC_000913 | 4314151 = | 99 (1.030) | coding (284/330 nt) | yjdP | putative periplasmic protein | |||||
| * | ? | NC_000913 | = 4013353 | 108 (1.090) | 4 (0.040) | 3/246 | NT | 3.7% | coding (301/2262 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase |
| ? | NC_000913 | = 4013396 | 107 (1.130) | coding (344/2262 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase | |||||
| * | ? | NC_000913 | 3839241 = | 279 (2.820) | 6 (0.060) | 5/246 | NT | 2.3% | coding (753/819 nt) | nlpA | cytoplasmic membrane lipoprotein‑28 |
| ? | NC_000913 | 3839282 = | 248 (2.630) | coding (712/819 nt) | nlpA | cytoplasmic membrane lipoprotein‑28 | |||||
| * | ? | NC_000913 | = 3831978 | 288 (2.910) | 3 (0.030) | 3/238 | NT | 1.1% | coding (1522/1710 nt) | yicH | putative inner membrane‑anchored periplasmic AsmA family protein |
| ? | NC_000913 | = 3832025 | 286 (3.130) | coding (1569/1710 nt) | yicH | putative inner membrane‑anchored periplasmic AsmA family protein | |||||
| * | ? | NC_000913 | 3828038 = | 283 (2.860) | 4 (0.040) | 4/248 | NT | 1.5% | coding (628/1206 nt) | gltS | glutamate transporter |
| ? | NC_000913 | 3828072 = | 269 (2.830) | coding (594/1206 nt) | gltS | glutamate transporter | |||||
| * | ? | NC_000913 | 3817574 = | 350 (3.540) | 17 (0.180) | 10/240 | NT | 5.0% | intergenic (+35/‑186) | yicC/dinD | UPF0701 family protein/DNA damage‑inducible protein |
| ? | NC_000913 | 3817604 = | 322 (3.500) | intergenic (+65/‑156) | yicC/dinD | UPF0701 family protein/DNA damage‑inducible protein | |||||
| * | ? | NC_000913 | = 3808942 | 296 (2.990) | 3 (0.030) | 3/250 | NT | 1.1% | coding (403/1278 nt) | waaA | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase (KDO transferase) |
| ? | NC_000913 | = 3809028 | 259 (2.700) | coding (489/1278 nt) | waaA | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase (KDO transferase) | |||||
| * | ? | NC_000913 | 3784333 = | 374 (3.780) | 4 (0.040) | 4/240 | NT | 1.1% | coding (110/252 nt) | grxC | glutaredoxin 3 |
| ? | NC_000913 | 3784402 = | 354 (3.850) | coding (41/252 nt) | grxC | glutaredoxin 3 | |||||